; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC11G213280 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC11G213280
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
Genome locationCicolChr11:5291378..5291701
RNA-Seq ExpressionCcUC11G213280
SyntenyCcUC11G213280
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039429.1 hypothetical protein E6C27_scaffold64G002360 [Cucumis melo var. makuwa]2.1e-2255.05Show/hide
Query:  MGGRCSFWGVAVVAMTL--TTILCSSHCCRGSVLTKANATYGEV-TAELLIYGDITRYLMFDGAEPKTGNTPNRNVAACGNGAGNSFEACGGSPNNKKRC
        MGGR SF G+ +V + +   TIL SS+ CRGSVL KANATYG V T E++IY DITR+LM  G++P TGNT   N+  C NG GN F  CGG+ NN+++C
Subjt:  MGGRCSFWGVAVVAMTL--TTILCSSHCCRGSVLTKANATYGEV-TAELLIYGDITRYLMFDGAEPKTGNTPNRNVAACGNGAGNSFEACGGSPNNKKRC

Query:  NAYNRGVPC
        N Y+   PC
Subjt:  NAYNRGVPC

KAA0039430.1 hypothetical protein E6C27_scaffold64G002370 [Cucumis melo var. makuwa]6.3e-2764.81Show/hide
Query:  MGGRCSFWGVA-VVAMTLTTILCSSHCCRGSVLTKANATYGEV-TAELLIYGDITRYLMFDGAEPKTGNTPNRNVAACGNGAGNSFEACGGSPNNKKRCN
        MG R SF G+  VV M L TI CSSH CRGSVL KANATY  V T ELLIY DI RYLMF+G + KTG T ++NV ACGNGAGNSF  C GS +NKK+CN
Subjt:  MGGRCSFWGVA-VVAMTLTTILCSSHCCRGSVLTKANATYGEV-TAELLIYGDITRYLMFDGAEPKTGNTPNRNVAACGNGAGNSFEACGGSPNNKKRCN

Query:  AYNRGVPC
        AY     C
Subjt:  AYNRGVPC

KAG6578548.1 hypothetical protein SDJN03_22996, partial [Cucurbita argyrosperma subsp. sororia]6.1e-2254.72Show/hide
Query:  MGGRCSFWGVAVVAMTLTTILCSSHCCRGSVLTKANATYGEVTAELLIYGDITRYLMFDGAEPKTGNTPNRNVAACGNGAGNSFEACGGSPNNKKRCNAY
        MGGRCSFWGVAV A+ +T ILCSS+  R S L +ANATYGEV  ELL+  +I R+L F   +  T  T N  V +CGNG GN    C GSP NKK CN+Y
Subjt:  MGGRCSFWGVAVVAMTLTTILCSSHCCRGSVLTKANATYGEVTAELLIYGDITRYLMFDGAEPKTGNTPNRNVAACGNGAGNSFEACGGSPNNKKRCNAY

Query:  NRGVPC
             C
Subjt:  NRGVPC

KGN52518.1 hypothetical protein Csa_007870 [Cucumis sativus]1.9e-2363.27Show/hide
Query:  VAVVAMTLTTILCSSHCCRGSVLTKANATYGEV-TAELLIYGDITRYLMFDGAEPKTGNTPNRNVAACGNGAGNSFEACGGSPNNKKRCNAYNRGVPC
        + VV M L TIL SSH CR SVL KANATYG V TAELLIY D+TRYLM+D A+ KTG T ++ V  C NG GNSF  CGGS +NKK+CNAY     C
Subjt:  VAVVAMTLTTILCSSHCCRGSVLTKANATYGEV-TAELLIYGDITRYLMFDGAEPKTGNTPNRNVAACGNGAGNSFEACGGSPNNKKRCNAYNRGVPC

KGN52519.1 hypothetical protein Csa_008872 [Cucumis sativus]2.3e-2155.05Show/hide
Query:  MGGRCSFWGVAVVAMTL--TTILCSSHCCRGSVLTKANATYGEV-TAELLIYGDITRYLMFDGAEPKTGNTPNRNVAACGNGAGNSFEACGGSPNNKKRC
        MGGR SF G+ +V + +   TIL SS+ CRGS+L KANAT G V T EL+I  DITRYL+F GA   TG T + N+  CGNGAGN+F  CGG+ NN ++C
Subjt:  MGGRCSFWGVAVVAMTL--TTILCSSHCCRGSVLTKANATYGEV-TAELLIYGDITRYLMFDGAEPKTGNTPNRNVAACGNGAGNSFEACGGSPNNKKRC

Query:  NAYNRGVPC
        NAY     C
Subjt:  NAYNRGVPC

TrEMBL top hitse value%identityAlignment
A0A0A0KSJ4 Uncharacterized protein9.2e-2463.27Show/hide
Query:  VAVVAMTLTTILCSSHCCRGSVLTKANATYGEV-TAELLIYGDITRYLMFDGAEPKTGNTPNRNVAACGNGAGNSFEACGGSPNNKKRCNAYNRGVPC
        + VV M L TIL SSH CR SVL KANATYG V TAELLIY D+TRYLM+D A+ KTG T ++ V  C NG GNSF  CGGS +NKK+CNAY     C
Subjt:  VAVVAMTLTTILCSSHCCRGSVLTKANATYGEV-TAELLIYGDITRYLMFDGAEPKTGNTPNRNVAACGNGAGNSFEACGGSPNNKKRCNAYNRGVPC

A0A0A0KUG7 Uncharacterized protein1.1e-2155.05Show/hide
Query:  MGGRCSFWGVAVVAMTL--TTILCSSHCCRGSVLTKANATYGEV-TAELLIYGDITRYLMFDGAEPKTGNTPNRNVAACGNGAGNSFEACGGSPNNKKRC
        MGGR SF G+ +V + +   TIL SS+ CRGS+L KANAT G V T EL+I  DITRYL+F GA   TG T + N+  CGNGAGN+F  CGG+ NN ++C
Subjt:  MGGRCSFWGVAVVAMTL--TTILCSSHCCRGSVLTKANATYGEV-TAELLIYGDITRYLMFDGAEPKTGNTPNRNVAACGNGAGNSFEACGGSPNNKKRC

Query:  NAYNRGVPC
        NAY     C
Subjt:  NAYNRGVPC

A0A0A0KVT8 Uncharacterized protein4.6e-2359.26Show/hide
Query:  MGGRCSFWGVA-VVAMTLTTILCSSHCCRGSVLTKANATYGEV-TAELLIYGDITRYLMFDGAEPKTGNTPNRNVAACGNGAGNSFEACGGSPNNKKRCN
        MG R SF G+  VV + L TIL SSH CRGSVL KANATY  V T EL+IYGDI R+LM  G++ KTG T  RNV ACGNGAGN++  CGGS +N+ +C+
Subjt:  MGGRCSFWGVA-VVAMTLTTILCSSHCCRGSVLTKANATYGEV-TAELLIYGDITRYLMFDGAEPKTGNTPNRNVAACGNGAGNSFEACGGSPNNKKRCN

Query:  AYNRGVPC
        AY     C
Subjt:  AYNRGVPC

A0A5D3BNE4 Uncharacterized protein1.0e-2255.05Show/hide
Query:  MGGRCSFWGVAVVAMTL--TTILCSSHCCRGSVLTKANATYGEV-TAELLIYGDITRYLMFDGAEPKTGNTPNRNVAACGNGAGNSFEACGGSPNNKKRC
        MGGR SF G+ +V + +   TIL SS+ CRGSVL KANATYG V T E++IY DITR+LM  G++P TGNT   N+  C NG GN F  CGG+ NN+++C
Subjt:  MGGRCSFWGVAVVAMTL--TTILCSSHCCRGSVLTKANATYGEV-TAELLIYGDITRYLMFDGAEPKTGNTPNRNVAACGNGAGNSFEACGGSPNNKKRC

Query:  NAYNRGVPC
        N Y+   PC
Subjt:  NAYNRGVPC

A0A5D3BR80 Uncharacterized protein3.1e-2764.81Show/hide
Query:  MGGRCSFWGVA-VVAMTLTTILCSSHCCRGSVLTKANATYGEV-TAELLIYGDITRYLMFDGAEPKTGNTPNRNVAACGNGAGNSFEACGGSPNNKKRCN
        MG R SF G+  VV M L TI CSSH CRGSVL KANATY  V T ELLIY DI RYLMF+G + KTG T ++NV ACGNGAGNSF  C GS +NKK+CN
Subjt:  MGGRCSFWGVA-VVAMTLTTILCSSHCCRGSVLTKANATYGEV-TAELLIYGDITRYLMFDGAEPKTGNTPNRNVAACGNGAGNSFEACGGSPNNKKRCN

Query:  AYNRGVPC
        AY     C
Subjt:  AYNRGVPC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGGCCGTTGTTCGTTTTGGGGAGTAGCGGTGGTGGCGATGACGTTAACAACCATCCTCTGTTCCAGCCATTGCTGCAGAGGTTCGGTTCTGACGAAGGCCAACGC
CACCTACGGCGAGGTGACGGCGGAGTTGCTGATCTATGGTGATATAACTCGGTATCTCATGTTTGATGGAGCCGAACCCAAGACAGGTAATACCCCGAACCGGAACGTCG
CAGCTTGTGGCAACGGTGCCGGAAACTCTTTTGAAGCCTGCGGTGGTAGCCCCAACAATAAAAAACGTTGCAACGCATACAATCGCGGTGTCCCTTGCAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTGGCCGTTGTTCGTTTTGGGGAGTAGCGGTGGTGGCGATGACGTTAACAACCATCCTCTGTTCCAGCCATTGCTGCAGAGGTTCGGTTCTGACGAAGGCCAACGC
CACCTACGGCGAGGTGACGGCGGAGTTGCTGATCTATGGTGATATAACTCGGTATCTCATGTTTGATGGAGCCGAACCCAAGACAGGTAATACCCCGAACCGGAACGTCG
CAGCTTGTGGCAACGGTGCCGGAAACTCTTTTGAAGCCTGCGGTGGTAGCCCCAACAATAAAAAACGTTGCAACGCATACAATCGCGGTGTCCCTTGCAAATAA
Protein sequenceShow/hide protein sequence
MGGRCSFWGVAVVAMTLTTILCSSHCCRGSVLTKANATYGEVTAELLIYGDITRYLMFDGAEPKTGNTPNRNVAACGNGAGNSFEACGGSPNNKKRCNAYNRGVPCK