CuGenDBv2

Gene ID	CcUC11G213960
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	60S ribosomal protein L10-like
Genome location	CicolChr11:6076605..6078704
RNA-Seq Expression	CcUC11G213960
Synteny	CcUC11G213960
Gene Ontology terms	GO:0000027 - ribosomal large subunit assembly (biological process) GO:0006412 - translation (biological process) GO:0022625 - cytosolic large ribosomal subunit (cellular component) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR001197 - Ribosomal protein L10e IPR016180 - Ribosomal protein L10e/L16 IPR018255 - Ribosomal protein L10e, conserved site IPR036920 - Ribosomal protein L10e/L16 superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6578494.1 60S ribosomal protein L10, partial [Cucurbita argyrosperma subsp. sororia]

3.9e-119

89.54

Show/hide

Query:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML
        RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYM+KFAGKDAFHLRVRVHPFHVLRINKML
Subjt:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML

Query:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDLCNFFLPSCSSKEMPSGGFTKFSRADY
        SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKW                      GFTKFSRADY
Subjt:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDLCNFFLPSCSSKEMPSGGFTKFSRADY

Query:  LAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA
        LAYKA+NKILPDGVNAKLLGCHGPLANRQPGRAFLP+TA
Subjt:  LAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA

XP_008459481.1 PREDICTED: 60S ribosomal protein L10-like [Cucumis melo]

3.5e-120

90.79

Show/hide

Query:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML
        RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML
Subjt:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML

Query:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDLCNFFLPSCSSKEMPSGGFTKFSRADY
        SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKW                      GFTKFSRADY
Subjt:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDLCNFFLPSCSSKEMPSGGFTKFSRADY

Query:  LAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA
        LAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA
Subjt:  LAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA

XP_022142890.1 60S ribosomal protein L10-like [Momordica charantia]

1.7e-119

90.38

Show/hide

Query:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML
        RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML
Subjt:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML

Query:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDLCNFFLPSCSSKEMPSGGFTKFSRADY
        SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKW                      GFTKFSRADY
Subjt:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDLCNFFLPSCSSKEMPSGGFTKFSRADY

Query:  LAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA
        L YKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA
Subjt:  LAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA

XP_022148973.1 60S ribosomal protein L10-like [Momordica charantia]

3.0e-119

89.54

Show/hide

Query:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML
        RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML
Subjt:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML

Query:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDLCNFFLPSCSSKEMPSGGFTKFSRADY
        SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKW                      GFTKFSRADY
Subjt:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDLCNFFLPSCSSKEMPSGGFTKFSRADY

Query:  LAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA
        L+YK+ENKI+PDGVNAKLLGCHGPLANRQPGRAFLPQTA
Subjt:  LAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA

XP_038891235.1 60S ribosomal protein L10-like [Benincasa hispida]

1.3e-119

90.38

Show/hide

Query:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML
        RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML
Subjt:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML

Query:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDLCNFFLPSCSSKEMPSGGFTKFSRADY
        SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKW                      GFTKFSRADY
Subjt:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDLCNFFLPSCSSKEMPSGGFTKFSRADY

Query:  LAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA
        LAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQ A
Subjt:  LAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CAD5 60S ribosomal protein L10-like

1.7e-120

90.79

Show/hide

Query:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML
        RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML
Subjt:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML

Query:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDLCNFFLPSCSSKEMPSGGFTKFSRADY
        SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKW                      GFTKFSRADY
Subjt:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDLCNFFLPSCSSKEMPSGGFTKFSRADY

Query:  LAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA
        LAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA
Subjt:  LAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA

A0A5A7TFE6 60S ribosomal protein L10

7.1e-119

89.12

Show/hide

Query:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML
        RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML
Subjt:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML

Query:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDLCNFFLPSCSSKEMPSGGFTKFSRADY
        SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKW                      GFTKFSRADY
Subjt:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDLCNFFLPSCSSKEMPSGGFTKFSRADY

Query:  LAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA
        L +K+ENKI+PDGVNAKLLGCHGPLANRQPGRAFLPQTA
Subjt:  LAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA

A0A6J1CM71 60S ribosomal protein L10-like

8.4e-120

90.38

Show/hide

Query:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML
        RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML
Subjt:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML

Query:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDLCNFFLPSCSSKEMPSGGFTKFSRADY
        SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKW                      GFTKFSRADY
Subjt:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDLCNFFLPSCSSKEMPSGGFTKFSRADY

Query:  LAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA
        L YKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA
Subjt:  LAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA

A0A6J1D5K0 60S ribosomal protein L10-like

1.4e-119

89.54

Show/hide

Query:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML
        RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML
Subjt:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML

Query:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDLCNFFLPSCSSKEMPSGGFTKFSRADY
        SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKW                      GFTKFSRADY
Subjt:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDLCNFFLPSCSSKEMPSGGFTKFSRADY

Query:  LAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA
        L+YK+ENKI+PDGVNAKLLGCHGPLANRQPGRAFLPQTA
Subjt:  LAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA

A0A6J1FEG0 60S ribosomal protein L10-like

7.1e-119

89.12

Show/hide

Query:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML
        RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYM+KFAGKDAFHLRVRVHPFHVLRINKML
Subjt:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML

Query:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDLCNFFLPSCSSKEMPSGGFTKFSRADY
        SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQH+QEALRRAKFKFPGRQKIIVSRKW                      GFTKFSRADY
Subjt:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDLCNFFLPSCSSKEMPSGGFTKFSRADY

Query:  LAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA
        LAYKA+NKILPDGVNAKLLGCHGPLANRQPGRAFLP TA
Subjt:  LAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA

SwissProt top hits

e value

%identity

Alignment

P93847 60S ribosomal protein L10

7.3e-113

85.11

Show/hide

Query:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML
        RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYM K AGKDAFHLRVRVHPFHVLRINKML
Subjt:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML

Query:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDLCNFFLPSCSSKEMPSGGFTKFSRADY
        SCAGADRLQTGMRGAFGKPQG CARVAIGQVLLSVRCKD NS HAQEALRRAKFKFPGRQKIIVSRKW                      GFTKFSR DY
Subjt:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDLCNFFLPSCSSKEMPSGGFTKFSRADY

Query:  LAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFL
        L YK+EN+I+PDGVNAKLLG HGPLA RQPGRAFL
Subjt:  LAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFL

Q08770 60S ribosomal protein L10-2

4.6e-107

Show/hide

Query:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML
        RPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMK+KGVDEFP+CVHLVSWEKENVSSEALEAARIACNKYM K AGKDAFHLR+RVHPFHVLRINKML
Subjt:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML

Query:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDLCNFFLPSCSSKEMPSGGFTKFSRADY
        SCAGADRLQTGMRGAFGK  GTCARVAIGQVLLSVRCKD++  HAQEALRRAKFKFPGRQKIIVSRKW                      GFTKF+RADY
Subjt:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDLCNFFLPSCSSKEMPSGGFTKFSRADY

Query:  LAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFL
           + E +I+PDGVNAK L CHGPLANRQPG AFL
Subjt:  LAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFL

Q93VT9 60S ribosomal protein L10-1

1.2e-107

79.66

Show/hide

Query:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML
        RPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYM K AGKDAFHLR+RVHPFHVLRINKML
Subjt:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML

Query:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDLCNFFLPSCSSKEMPSGGFTKFSRADY
        SCAGADRLQTGMRGAFGK  GTCARVAIGQVLLSVRCKD++  HAQEALRRAKFKFPGRQKIIVSRKW                      GFTKF+RAD+
Subjt:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDLCNFFLPSCSSKEMPSGGFTKFSRADY

Query:  LAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLP
           + E +++PDGVNAK L CHGPLANRQPG AFLP
Subjt:  LAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLP

Q9M5M7 60S ribosomal protein L10

2.8e-112

83.26

Show/hide

Query:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML
        RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYM KFAGKDAFHLRVRVHPFHVLRINKML
Subjt:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML

Query:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDLCNFFLPSCSSKEMPSGGFTKFSRADY
        SCAGADRLQTGMRGAFGKPQG CARVAIGQVLLSVRCKD+NS +AQEALRRAKFKFPGRQKIIVSRKW                      GFTK +RADY
Subjt:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDLCNFFLPSCSSKEMPSGGFTKFSRADY

Query:  LAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA
           K+EN+ILPDGVNAKLLGCHG LANR+PGRAF+   A
Subjt:  LAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA

Q9SPB3 60S ribosomal protein L10

1.5e-113

83.4

Show/hide

Query:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML
        RPARCYRQIKNKPYPKSR+CRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYM K+AGKDAFHLRVRVHPFHVLRINKML
Subjt:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML

Query:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDLCNFFLPSCSSKEMPSGGFTKFSRADY
        SCAGADRLQTGMRGAFGKPQGTCARV+IGQVLLSVRCKD NS HAQEALRRAKFKFP RQKIIVSRKW                      GFTKF+R DY
Subjt:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDLCNFFLPSCSSKEMPSGGFTKFSRADY

Query:  LAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFL
        + +K++N+ILPDGVNAKLLGCHGPLANRQPG+AF+
Subjt:  LAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFL

Arabidopsis top hits

e value

%identity

Alignment

AT1G14320.1 Ribosomal protein L16p/L10e family protein

8.6e-109

79.66

Show/hide

Query:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML
        RPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYM K AGKDAFHLR+RVHPFHVLRINKML
Subjt:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML

Query:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDLCNFFLPSCSSKEMPSGGFTKFSRADY
        SCAGADRLQTGMRGAFGK  GTCARVAIGQVLLSVRCKD++  HAQEALRRAKFKFPGRQKIIVSRKW                      GFTKF+RAD+
Subjt:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDLCNFFLPSCSSKEMPSGGFTKFSRADY

Query:  LAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLP
           + E +++PDGVNAK L CHGPLANRQPG AFLP
Subjt:  LAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLP

AT1G14320.2 Ribosomal protein L16p/L10e family protein

5.1e-69

57.63

Show/hide

Query:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML
        RPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYM                           
Subjt:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML

Query:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDLCNFFLPSCSSKEMPSGGFTKFSRADY
                                      VLLSVRCKD++  HAQEALRRAKFKFPGRQKIIVSRKW                      GFTKF+RAD+
Subjt:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDLCNFFLPSCSSKEMPSGGFTKFSRADY

Query:  LAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLP
           + E +++PDGVNAK L CHGPLANRQPG AFLP
Subjt:  LAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLP

AT1G26910.1 Ribosomal protein L16p/L10e family protein

3.3e-108

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Query:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML
        RPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMK+KGVDEFP+CVHLVSWEKENVSSEALEAARIACNKYM K AGKDAFHLR+RVHPFHVLRINKML
Subjt:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML

Query:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDLCNFFLPSCSSKEMPSGGFTKFSRADY
        SCAGADRLQTGMRGAFGK  GTCARVAIGQVLLSVRCKD++  HAQEALRRAKFKFPGRQKIIVSRKW                      GFTKF+RADY
Subjt:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDLCNFFLPSCSSKEMPSGGFTKFSRADY

Query:  LAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFL
           + E +I+PDGVNAK L CHGPLANRQPG AFL
Subjt:  LAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFL

AT1G66580.1 senescence associated gene 24

1.8e-106

78.24

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Query:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML
        RPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYM K AGKDAFHLR+RVHPFHVLRINKML
Subjt:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML

Query:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDLCNFFLPSCSSKEMPSGGFTKFSRADY
        SCAGADRLQTGMRGAFGK  GTCARVAIGQVLLSVRCKD++  HAQEALRRAKFKFPGRQKIIVSRKW                      GFTKF+RA+Y
Subjt:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDLCNFFLPSCSSKEMPSGGFTKFSRADY

Query:  LAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA
           +A  +I+PDGVNAK L  HGPLANRQPG AF+  T+
Subjt:  LAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA

Sequences

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CDS sequence

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ATGGCGGGTTTCTGGTGCCGACGAGGTCAAGTTCGAGTTGGGAGGGACGAGGTAACGCGCGCTCGCCATGGGGAGAAGTACATACAAATTGTTCGTCGTTTTTTCTTGAC
GGAAAATTTAGTTGTTGGAAATGGATGCATTTCCGATTGTTACCATTGGAGACCTGCAAGGTGTTACAGGCAAATTAAAAATAAGCCTTATCCAAAATCCAGATTTTGTC
GTGGTGTCCCTGATCCTAAGATCAGGATCTACGATGTTGGAATGAAAAAGAAGGGTGTGGATGAATTTCCTTTTTGTGTTCACCTAGTGAGTTGGGAGAAGGAAAACGTG
TCGAGTGAGGCTTTGGAAGCTGCTCGGATTGCTTGCAATAAGTATATGGCTAAGTTCGCTGGGAAGGATGCATTCCACTTGAGGGTCAGGGTGCACCCCTTCCATGTTCT
GCGAATTAATAAGATGCTTTCATGTGCTGGGGCTGATAGGCTCCAGACTGGTATGAGAGGTGCTTTTGGCAAACCTCAAGGAACCTGTGCAAGAGTGGCCATCGGTCAGG
TTCTTCTTTCAGTTCGGTGCAAGGATAGTAACAGCCAACATGCACAGGAAGCCCTCCGTCGTGCTAAGTTCAAATTCCCTGGTCGTCAGAAGATCATTGTCAGCAGGAAG
TGGTATGTCTCAAGAGATCTTTGCAATTTTTTTCTTCCTTCTTGTTCATCTAAAGAAATGCCTTCTGGGGGATTCACTAAATTCAGTCGGGCTGATTACCTTGCTTACAA
GGCAGAGAACAAAATTCTTCCAGATGGTGTTAACGCCAAGCTTCTTGGATGCCATGGACCTTTAGCCAATCGTCAACCTGGAAGAGCATTTCTACCTCAAACTGCCTAA

mRNA sequence

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Protein sequence

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MAGFWCRRGQVRVGRDEVTRARHGEKYIQIVRRFFLTENLVVGNGCISDCYHWRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRK
WYVSRDLCNFFLPSCSSKEMPSGGFTKFSRADYLAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA

CcUC11G213960 (gene) of Watermelon (PI 537277) v1 genome