; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC11G214830 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC11G214830
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionGATA type zinc finger transcription factor family protein
Genome locationCicolChr11:7048613..7050561
RNA-Seq ExpressionCcUC11G214830
SyntenyCcUC11G214830
Gene Ontology termsGO:0051017 - actin filament bundle assembly (biological process)
GO:0005886 - plasma membrane (cellular component)
GO:0015629 - actin cytoskeleton (cellular component)
GO:0051015 - actin filament binding (molecular function)
InterPro domainsIPR001781 - Zinc finger, LIM-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578438.1 LIM domain-containing protein WLIM2b, partial [Cucurbita argyrosperma subsp. sororia]2.2e-9171.31Show/hide
Query:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFYLVYGESKHLAKLFSKGYPNVISTSASSIRLLMYLS
        MSFIGTQQKCK+CEKTVYPVEQLS DGVSYHKSCFKCSHCKGTLK                                                       
Subjt:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFYLVYGESKHLAKLFSKGYPNVISTSASSIRLLMYLS

Query:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG
         LSNY SMEGVLYCKPHFEQLFKE+GNF KNFQSPAKSAEKLTPEL        SPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG
Subjt:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG

Query:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPEA
        GC+ISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKR AA VPEA
Subjt:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPEA

XP_004138434.1 LIM domain-containing protein WLIM2b [Cucumis sativus]2.8e-9473.31Show/hide
Query:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFYLVYGESKHLAKLFSKGYPNVISTSASSIRLLMYLS
        MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLK                                                       
Subjt:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFYLVYGESKHLAKLFSKGYPNVISTSASSIRLLMYLS

Query:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG
         LSNY SMEGVLYCKPHFEQLFKETGNF KNFQSPAKSAEKLTPEL        SPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG
Subjt:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG

Query:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPEA
        GCA+SPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPEA
Subjt:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPEA

XP_022939310.1 LIM domain-containing protein WLIM2b [Cucurbita moschata]1.0e-9171.71Show/hide
Query:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFYLVYGESKHLAKLFSKGYPNVISTSASSIRLLMYLS
        MSFIGTQQKCKACEKTVYPVEQLS DGVSYHKSCFKCSHCKGTLK                                                       
Subjt:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFYLVYGESKHLAKLFSKGYPNVISTSASSIRLLMYLS

Query:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG
         LSNY SMEGVLYCKPHFEQLFKE+GNF KNFQSPAKSAEKLTPEL        SPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG
Subjt:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG

Query:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPEA
        GC+ISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKR AA VPEA
Subjt:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPEA

XP_023550254.1 LIM domain-containing protein WLIM2b [Cucurbita pepo subsp. pepo]2.2e-9171.31Show/hide
Query:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFYLVYGESKHLAKLFSKGYPNVISTSASSIRLLMYLS
        MSFIGTQQKCKACEKTVYPVEQLS DGVSYHKSCFKC+HCKGTLK                                                       
Subjt:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFYLVYGESKHLAKLFSKGYPNVISTSASSIRLLMYLS

Query:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG
         LSNY SMEGVLYCKPHFEQLFKE+GNF KNFQSPAKSAEKLTPEL        SPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG
Subjt:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG

Query:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPEA
        GC+ISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKR AA VPEA
Subjt:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPEA

XP_038884117.1 LIM domain-containing protein WLIM2b [Benincasa hispida]8.2e-9472.91Show/hide
Query:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFYLVYGESKHLAKLFSKGYPNVISTSASSIRLLMYLS
        MSF GTQQKCKACEKTVYPVEQLSADG+SYHKSCFKCSHCKGTLK                                                       
Subjt:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFYLVYGESKHLAKLFSKGYPNVISTSASSIRLLMYLS

Query:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG
         LSNY SMEGVLYCKPHFEQLFKETGNF KNFQSPAKSAEKLTPEL        SPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG
Subjt:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG

Query:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPEA
        GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPEA
Subjt:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPEA

TrEMBL top hitse value%identityAlignment
A0A0A0KAA4 Uncharacterized protein1.4e-9473.31Show/hide
Query:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFYLVYGESKHLAKLFSKGYPNVISTSASSIRLLMYLS
        MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLK                                                       
Subjt:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFYLVYGESKHLAKLFSKGYPNVISTSASSIRLLMYLS

Query:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG
         LSNY SMEGVLYCKPHFEQLFKETGNF KNFQSPAKSAEKLTPEL        SPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG
Subjt:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG

Query:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPEA
        GCA+SPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPEA
Subjt:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPEA

A0A1S3B3E4 LIM domain-containing protein WLIM2b1.4e-9473.31Show/hide
Query:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFYLVYGESKHLAKLFSKGYPNVISTSASSIRLLMYLS
        MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLK                                                       
Subjt:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFYLVYGESKHLAKLFSKGYPNVISTSASSIRLLMYLS

Query:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG
         LSNY SMEGVLYCKPHFEQLFKETGNF KNFQSPAKSAEKLTPEL        SPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG
Subjt:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG

Query:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPEA
        GCA+SPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPEA
Subjt:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPEA

A0A6J1FFI9 LIM domain-containing protein WLIM2b4.9e-9271.71Show/hide
Query:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFYLVYGESKHLAKLFSKGYPNVISTSASSIRLLMYLS
        MSFIGTQQKCKACEKTVYPVEQLS DGVSYHKSCFKCSHCKGTLK                                                       
Subjt:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFYLVYGESKHLAKLFSKGYPNVISTSASSIRLLMYLS

Query:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG
         LSNY SMEGVLYCKPHFEQLFKE+GNF KNFQSPAKSAEKLTPEL        SPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG
Subjt:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG

Query:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPEA
        GC+ISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKR AA VPEA
Subjt:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPEA

A0A6J1JU67 LIM domain-containing protein WLIM2b-like1.6e-9070.92Show/hide
Query:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFYLVYGESKHLAKLFSKGYPNVISTSASSIRLLMYLS
        MSF GTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLK                                                       
Subjt:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFYLVYGESKHLAKLFSKGYPNVISTSASSIRLLMYLS

Query:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG
         LSNYCSMEGVLYCKPHFEQLFKETGNF KNFQSPAKSAEK TPEL        SPSKAAGMFSGTQDKCATCGKTVYPLEKVTVE+Q YHKSCFKCSHG
Subjt:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG

Query:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPEA
        GCA+SPSNYAALEGILYCKHHFSQLFKEKGSYNHLIK ASMKR+AA VPEA
Subjt:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPEA

A0A6J1K140 LIM domain-containing protein WLIM2b4.9e-9271.71Show/hide
Query:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFYLVYGESKHLAKLFSKGYPNVISTSASSIRLLMYLS
        MSFIGTQQKCKACEKTVYPVEQLS DGVSYHKSCFKCSHCKGTLK                                                       
Subjt:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFYLVYGESKHLAKLFSKGYPNVISTSASSIRLLMYLS

Query:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG
         LSNY SMEGVLYCKPHFEQLFKE+GNF KNFQSPAKSAEKLTPEL        SPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG
Subjt:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG

Query:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPEA
        GC+ISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKR AA VPEA
Subjt:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPEA

SwissProt top hitse value%identityAlignment
O04193 LIM domain-containing protein WLIM2a3.2e-8061.51Show/hide
Query:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFYLVYGESKHLAKLFSKGYPNVISTSASSIRLLMYLS
        MSF GTQQKC+ACEKTVYPVE LSADG+SYHK+CFKCSHCK  L                                                        
Subjt:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFYLVYGESKHLAKLFSKGYPNVISTSASSIRLLMYLS

Query:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKS-AEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSH
        QLSNY SMEGV+YC+PHFEQLFKE+G+F KNFQSPAK   +K TPEL        +PS+ AGMFSGTQDKCATC KTVYP+EKVTVESQ YHKSCFKCSH
Subjt:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKS-AEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSH

Query:  GGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPEA
        GGC ISPSNYAALEGILYCKHHF+QLFKEKGSYNHLIKSAS+KR+ A    A
Subjt:  GGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPEA

O80839 LIM domain-containing protein PLIM2a4.0e-5947.97Show/hide
Query:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFYLVYGESKHLAKLFSKGYPNVISTSASSIRLLMYLS
        MSF GT  KCKAC+KTVY ++ L+ +G +YHKSCF+C+HCKGTL                                                        
Subjt:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFYLVYGESKHLAKLFSKGYPNVISTSASSIRLLMYLS

Query:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG
         +SNY SM+GVLYCKPHFEQLFKE+GN+ KNFQ  A   EK    L        +PSK +  FSGTQDKCATC KTVYPLEKVT+E +SYHK+CF+C+H 
Subjt:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG

Query:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAA
        GC ++ S+YA+L G+LYCK HF+QLF EKGSYNH+ ++A+  R +A
Subjt:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAA

Q1ECF5 LIM domain-containing protein PLIM2b2.6e-5845.53Show/hide
Query:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFYLVYGESKHLAKLFSKGYPNVISTSASSIRLLMYLS
        MSF GT  KC  C+KTVY V+ LS +G+ YHKSCF+C+HCKGTL                                                        
Subjt:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFYLVYGESKHLAKLFSKGYPNVISTSASSIRLLMYLS

Query:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG
        Q+SNY SM+GVLYCK HFEQLFKE+GNF KNFQ P K+ +   PEL        +PSK + +F GTQDKCA C KTVYPLEK+ +E + +HK+CF+C+HG
Subjt:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG

Query:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAA
        GC ++ S+YA+L+ +LYC+HHF+QLF EKG+Y H++++A+ +R+A+
Subjt:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAA

Q7F9R9 LIM domain-containing protein PLIM2b3.4e-5848.61Show/hide
Query:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFYLVYGESKHLAKLFSKGYPNVISTSASSIRLLMYLS
        MSF GTQ KC AC+KTV+ ++ L+ADGV YHK+CFKCSHCKG L                                                        
Subjt:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFYLVYGESKHLAKLFSKGYPNVISTSASSIRLLMYLS

Query:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG
         + +Y SM+GVLYCK HFEQLFKETG+F K F    +S +K   EL        +PSK    FSGTQDKCA C KTVYPLEK+T+E +SYHKSCFKCSHG
Subjt:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG

Query:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHL-IKSASMKRSAAPVPE
        GC ++ S+YAAL G+LYCK HF QLF EKGSYNH+  KS S +     VPE
Subjt:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHL-IKSASMKRSAAPVPE

Q9M047 LIM domain-containing protein WLIM2b4.4e-8263.82Show/hide
Query:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFYLVYGESKHLAKLFSKGYPNVISTSASSIRLLMYLS
        MSF GTQQKCKACEKTVY VE LSADGV YHKSCFKC+HCK  L                                                        
Subjt:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFYLVYGESKHLAKLFSKGYPNVISTSASSIRLLMYLS

Query:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG
        QLS+Y SMEGVLYCKPHFEQLFKE+G+F KNFQSPAKSA+K TPEL        +PS+ AG FSGTQ+KCATC KTVYP+EKVTVESQ+YHKSCFKCSHG
Subjt:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG

Query:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAA
        GC ISPSNYAALEGILYCKHHF+QLFKEKGSYNHLIKSAS+KRSAA
Subjt:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAA

Arabidopsis top hitse value%identityAlignment
AT3G55770.1 GATA type zinc finger transcription factor family protein3.1e-8363.82Show/hide
Query:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFYLVYGESKHLAKLFSKGYPNVISTSASSIRLLMYLS
        MSF GTQQKCKACEKTVY VE LSADGV YHKSCFKC+HCK  L                                                        
Subjt:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFYLVYGESKHLAKLFSKGYPNVISTSASSIRLLMYLS

Query:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG
        QLS+Y SMEGVLYCKPHFEQLFKE+G+F KNFQSPAKSA+K TPEL        +PS+ AG FSGTQ+KCATC KTVYP+EKVTVESQ+YHKSCFKCSHG
Subjt:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG

Query:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAA
        GC ISPSNYAALEGILYCKHHF+QLFKEKGSYNHLIKSAS+KRSAA
Subjt:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAA

AT3G55770.2 GATA type zinc finger transcription factor family protein3.1e-8363.82Show/hide
Query:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFYLVYGESKHLAKLFSKGYPNVISTSASSIRLLMYLS
        MSF GTQQKCKACEKTVY VE LSADGV YHKSCFKC+HCK  L                                                        
Subjt:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFYLVYGESKHLAKLFSKGYPNVISTSASSIRLLMYLS

Query:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG
        QLS+Y SMEGVLYCKPHFEQLFKE+G+F KNFQSPAKSA+K TPEL        +PS+ AG FSGTQ+KCATC KTVYP+EKVTVESQ+YHKSCFKCSHG
Subjt:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG

Query:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAA
        GC ISPSNYAALEGILYCKHHF+QLFKEKGSYNHLIKSAS+KRSAA
Subjt:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAA

AT3G55770.3 GATA type zinc finger transcription factor family protein3.1e-8363.82Show/hide
Query:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFYLVYGESKHLAKLFSKGYPNVISTSASSIRLLMYLS
        MSF GTQQKCKACEKTVY VE LSADGV YHKSCFKC+HCK  L                                                        
Subjt:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFYLVYGESKHLAKLFSKGYPNVISTSASSIRLLMYLS

Query:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG
        QLS+Y SMEGVLYCKPHFEQLFKE+G+F KNFQSPAKSA+K TPEL        +PS+ AG FSGTQ+KCATC KTVYP+EKVTVESQ+YHKSCFKCSHG
Subjt:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG

Query:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAA
        GC ISPSNYAALEGILYCKHHF+QLFKEKGSYNHLIKSAS+KRSAA
Subjt:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAA

AT3G55770.4 GATA type zinc finger transcription factor family protein3.1e-8363.82Show/hide
Query:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFYLVYGESKHLAKLFSKGYPNVISTSASSIRLLMYLS
        MSF GTQQKCKACEKTVY VE LSADGV YHKSCFKC+HCK  L                                                        
Subjt:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFYLVYGESKHLAKLFSKGYPNVISTSASSIRLLMYLS

Query:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG
        QLS+Y SMEGVLYCKPHFEQLFKE+G+F KNFQSPAKSA+K TPEL        +PS+ AG FSGTQ+KCATC KTVYP+EKVTVESQ+YHKSCFKCSHG
Subjt:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG

Query:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAA
        GC ISPSNYAALEGILYCKHHF+QLFKEKGSYNHLIKSAS+KRSAA
Subjt:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAA

AT3G55770.5 GATA type zinc finger transcription factor family protein3.1e-8363.82Show/hide
Query:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFYLVYGESKHLAKLFSKGYPNVISTSASSIRLLMYLS
        MSF GTQQKCKACEKTVY VE LSADGV YHKSCFKC+HCK  L                                                        
Subjt:  MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFYLVYGESKHLAKLFSKGYPNVISTSASSIRLLMYLS

Query:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG
        QLS+Y SMEGVLYCKPHFEQLFKE+G+F KNFQSPAKSA+K TPEL        +PS+ AG FSGTQ+KCATC KTVYP+EKVTVESQ+YHKSCFKCSHG
Subjt:  QLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHG

Query:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAA
        GC ISPSNYAALEGILYCKHHF+QLFKEKGSYNHLIKSAS+KRSAA
Subjt:  GCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTTCATTGGCACACAACAAAAGTGCAAGGCCTGTGAGAAGACTGTCTACCCTGTGGAGCAGCTCTCTGCTGATGGAGTTTCCTACCATAAGTCTTGCTTTAAATG
CAGCCACTGCAAAGGGACTCTAAAGCTTAAGTTGATTGGTTATAGCATATATTCTTTTACATGTATTCTTAATAACGCTTTCTATTTGGTATACGGGGAATCTAAGCATC
TTGCCAAACTATTTTCTAAAGGATATCCAAATGTGATATCAACTTCTGCCTCCAGTATCCGTCTGTTGATGTATCTATCACAACTGAGCAATTATTGTTCAATGGAAGGT
GTTCTTTACTGTAAGCCTCATTTCGAGCAGCTCTTCAAAGAGACCGGCAACTTCCAGAAGAACTTCCAATCACCTGCCAAGTCAGCTGAGAAGTTAACTCCAGAGCTGGT
AATTTCCTGTTGTAATCAATTGTCACCTAGCAAAGCTGCTGGCATGTTTTCTGGTACTCAAGACAAATGTGCTACTTGTGGTAAAACTGTCTATCCATTAGAGAAGGTAA
CAGTTGAAAGCCAATCCTACCACAAGTCCTGTTTTAAGTGCTCTCATGGAGGGTGTGCTATATCACCATCAAATTATGCAGCATTAGAAGGTATTCTATATTGCAAACAC
CACTTCTCCCAGCTTTTCAAGGAAAAGGGAAGCTACAACCACCTGATCAAGTCTGCATCCATGAAGCGTTCTGCTGCCCCCGTTCCCGAAGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTTTCATTGGCACACAACAAAAGTGCAAGGCCTGTGAGAAGACTGTCTACCCTGTGGAGCAGCTCTCTGCTGATGGAGTTTCCTACCATAAGTCTTGCTTTAAATG
CAGCCACTGCAAAGGGACTCTAAAGCTTAAGTTGATTGGTTATAGCATATATTCTTTTACATGTATTCTTAATAACGCTTTCTATTTGGTATACGGGGAATCTAAGCATC
TTGCCAAACTATTTTCTAAAGGATATCCAAATGTGATATCAACTTCTGCCTCCAGTATCCGTCTGTTGATGTATCTATCACAACTGAGCAATTATTGTTCAATGGAAGGT
GTTCTTTACTGTAAGCCTCATTTCGAGCAGCTCTTCAAAGAGACCGGCAACTTCCAGAAGAACTTCCAATCACCTGCCAAGTCAGCTGAGAAGTTAACTCCAGAGCTGGT
AATTTCCTGTTGTAATCAATTGTCACCTAGCAAAGCTGCTGGCATGTTTTCTGGTACTCAAGACAAATGTGCTACTTGTGGTAAAACTGTCTATCCATTAGAGAAGGTAA
CAGTTGAAAGCCAATCCTACCACAAGTCCTGTTTTAAGTGCTCTCATGGAGGGTGTGCTATATCACCATCAAATTATGCAGCATTAGAAGGTATTCTATATTGCAAACAC
CACTTCTCCCAGCTTTTCAAGGAAAAGGGAAGCTACAACCACCTGATCAAGTCTGCATCCATGAAGCGTTCTGCTGCCCCCGTTCCCGAAGCTTAAAGTTCTAATTCTCG
TATCATTATTCATGGTTTCGGACATGACTCTATTTACATGAATGTGTTTTAACTTAAAAATTTATGTTTTTGAGATGGAAAAAAGGGTAAAGGAAAAATATATATGTTAC
CATCATTTCGGCTCGTGTGTTTATTTGGGCAAACTGTTGAATTTGATCGATATTTGAGATGCAAACCTTATTTATTGTTTCCAGGACTTGCATATTTGCATATTTTGAGC
ATTATGCATTGTGTTTTCGTGCATAACAAAAACATTTATGGAGAGAATGGGAACAGAACGCTGCAGATTGAATACCCAAAAAATAAAAGATTAAGGGTAGAGGAAAGGGA
GACATTTCTCTTCTAATTGACACCATAAGGTGGGATGAAACATATTCTGGAATGATGTTTTTGCAATGTGGTATTATTATGATTT
Protein sequenceShow/hide protein sequence
MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFYLVYGESKHLAKLFSKGYPNVISTSASSIRLLMYLSQLSNYCSMEG
VLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHGGCAISPSNYAALEGILYCKH
HFSQLFKEKGSYNHLIKSASMKRSAAPVPEA