; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC11G215280 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC11G215280
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionActin-related protein 2/3 complex subunit 5
Genome locationCicolChr11:7742853..7747482
RNA-Seq ExpressionCcUC11G215280
SyntenyCcUC11G215280
Gene Ontology termsGO:0030833 - regulation of actin filament polymerization (biological process)
GO:0034314 - Arp2/3 complex-mediated actin nucleation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005885 - Arp2/3 protein complex (cellular component)
GO:0051015 - actin filament binding (molecular function)
InterPro domainsIPR006789 - Actin-related protein 2/3 complex subunit 5
IPR036743 - Actin-related protein 2/3 complex subunit 5 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004138489.1 actin-related protein 2/3 complex subunit 5A [Cucumis sativus]1.3e-6176.02Show/hide
Query:  MATTGEFVEADNAEAIITRIEHKSRKIESLLKQSRPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKVSPKPLGHE
        MATT +FVEADNAEAIITRIEHKSRKIESLLKQ +PVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMK         
Subjt:  MATTGEFVEADNAEAIITRIEHKSRKIESLLKQSRPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKVSPKPLGHE

Query:  RDISLLEMTKTKLSRMKRKLTLFQITMYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLADTINTV
                                   YLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLADT+NTV
Subjt:  RDISLLEMTKTKLSRMKRKLTLFQITMYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLADTINTV
XP_008441367.1 PREDICTED: actin-related protein 2/3 complex subunit 5A [Cucumis melo]8.7e-6377.78Show/hide
Query:  MATTGEFVEADNAEAIITRIEHKSRKIESLLKQSRPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKVSPKPLGHE
        MATT EFVEADNAEAIITRIEHKSRKIESLLKQS+PVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMK         
Subjt:  MATTGEFVEADNAEAIITRIEHKSRKIESLLKQSRPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKVSPKPLGHE

Query:  RDISLLEMTKTKLSRMKRKLTLFQITMYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLADTINTV
                                   YLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLADTINTV
Subjt:  RDISLLEMTKTKLSRMKRKLTLFQITMYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLADTINTV
XP_015889484.1 actin-related protein 2/3 complex subunit 5A [Ziziphus jujuba]5.7e-6276.02Show/hide
Query:  MATTGEFVEADNAEAIITRIEHKSRKIESLLKQSRPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKVSPKPLGHE
        MA TGEFVEADNAEAIITRIEHKSRKIESLLKQ +PVEALKTALEGSPPNTRDERCKSANWIVVHRA+MAIKDVDGMFSSLDPEYYDILMK         
Subjt:  MATTGEFVEADNAEAIITRIEHKSRKIESLLKQSRPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKVSPKPLGHE

Query:  RDISLLEMTKTKLSRMKRKLTLFQITMYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLADTINTV
                                   YLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLADT+NTV
Subjt:  RDISLLEMTKTKLSRMKRKLTLFQITMYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLADTINTV
XP_022133485.1 actin-related protein 2/3 complex subunit 5A [Momordica charantia]7.4e-6276.61Show/hide
Query:  MATTGEFVEADNAEAIITRIEHKSRKIESLLKQSRPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKVSPKPLGHE
        MA   EFVEADNAEAIITRIEHKSRKIESLLKQSRPVEALKTALEGSPPNTRDERCKSANWI VHRALMAIKDVDGMFSSLDPEYYDILMK         
Subjt:  MATTGEFVEADNAEAIITRIEHKSRKIESLLKQSRPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKVSPKPLGHE

Query:  RDISLLEMTKTKLSRMKRKLTLFQITMYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLADTINTV
                                   YLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLADTINTV
Subjt:  RDISLLEMTKTKLSRMKRKLTLFQITMYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLADTINTV
XP_038884940.1 actin-related protein 2/3 complex subunit 5A [Benincasa hispida]3.5e-6478.95Show/hide
Query:  MATTGEFVEADNAEAIITRIEHKSRKIESLLKQSRPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKVSPKPLGHE
        MATTGEFVEADNAEAIITRIEHKSRKIESLLKQSRPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMK         
Subjt:  MATTGEFVEADNAEAIITRIEHKSRKIESLLKQSRPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKVSPKPLGHE

Query:  RDISLLEMTKTKLSRMKRKLTLFQITMYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLADTINTV
                                   YLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLADTINTV
Subjt:  RDISLLEMTKTKLSRMKRKLTLFQITMYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLADTINTV
TrEMBL top hitse value%identityAlignment
A0A0A0KD59 Actin-related protein 2/3 complex subunit 56.1e-6276.02Show/hide
Query:  MATTGEFVEADNAEAIITRIEHKSRKIESLLKQSRPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKVSPKPLGHE
        MATT +FVEADNAEAIITRIEHKSRKIESLLKQ +PVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMK         
Subjt:  MATTGEFVEADNAEAIITRIEHKSRKIESLLKQSRPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKVSPKPLGHE

Query:  RDISLLEMTKTKLSRMKRKLTLFQITMYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLADTINTV
                                   YLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLADT+NTV
Subjt:  RDISLLEMTKTKLSRMKRKLTLFQITMYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLADTINTV
A0A1S3B407 Actin-related protein 2/3 complex subunit 54.2e-6377.78Show/hide
Query:  MATTGEFVEADNAEAIITRIEHKSRKIESLLKQSRPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKVSPKPLGHE
        MATT EFVEADNAEAIITRIEHKSRKIESLLKQS+PVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMK         
Subjt:  MATTGEFVEADNAEAIITRIEHKSRKIESLLKQSRPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKVSPKPLGHE

Query:  RDISLLEMTKTKLSRMKRKLTLFQITMYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLADTINTV
                                   YLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLADTINTV
Subjt:  RDISLLEMTKTKLSRMKRKLTLFQITMYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLADTINTV
A0A6J1BVD6 Actin-related protein 2/3 complex subunit 53.6e-6276.61Show/hide
Query:  MATTGEFVEADNAEAIITRIEHKSRKIESLLKQSRPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKVSPKPLGHE
        MA   EFVEADNAEAIITRIEHKSRKIESLLKQSRPVEALKTALEGSPPNTRDERCKSANWI VHRALMAIKDVDGMFSSLDPEYYDILMK         
Subjt:  MATTGEFVEADNAEAIITRIEHKSRKIESLLKQSRPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKVSPKPLGHE

Query:  RDISLLEMTKTKLSRMKRKLTLFQITMYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLADTINTV
                                   YLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLADTINTV
Subjt:  RDISLLEMTKTKLSRMKRKLTLFQITMYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLADTINTV
A0A6P4A354 Actin-related protein 2/3 complex subunit 52.7e-6276.02Show/hide
Query:  MATTGEFVEADNAEAIITRIEHKSRKIESLLKQSRPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKVSPKPLGHE
        MA TGEFVEADNAEAIITRIEHKSRKIESLLKQ +PVEALKTALEGSPPNTRDERCKSANWIVVHRA+MAIKDVDGMFSSLDPEYYDILMK         
Subjt:  MATTGEFVEADNAEAIITRIEHKSRKIESLLKQSRPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKVSPKPLGHE

Query:  RDISLLEMTKTKLSRMKRKLTLFQITMYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLADTINTV
                                   YLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLADT+NTV
Subjt:  RDISLLEMTKTKLSRMKRKLTLFQITMYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLADTINTV
W9R3V7 Actin-related protein 2/3 complex subunit 51.0e-6176.02Show/hide
Query:  MATTGEFVEADNAEAIITRIEHKSRKIESLLKQSRPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKVSPKPLGHE
        MA T  FVEADNAEAIITRIEHKSRKIESLLKQS+PVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMK         
Subjt:  MATTGEFVEADNAEAIITRIEHKSRKIESLLKQSRPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKVSPKPLGHE

Query:  RDISLLEMTKTKLSRMKRKLTLFQITMYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLADTINTV
                                   YLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLADT+NTV
Subjt:  RDISLLEMTKTKLSRMKRKLTLFQITMYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLADTINTV
SwissProt top hitse value%identityAlignment
B3H6Y2 Actin-related protein 2/3 complex subunit 5B8.8e-5061.99Show/hide
Query:  MATTGEFVEADNAEAIITRIEHKSRKIESLLKQSRPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKVSPKPLGHE
        MA    FVEADNAE I+ RIE KS+KIESLLK  + VEALKTAL+GSPP T DERCKSANWIVVHRA+MAIKD++GM +SL  EYYDILMK         
Subjt:  MATTGEFVEADNAEAIITRIEHKSRKIESLLKQSRPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKVSPKPLGHE

Query:  RDISLLEMTKTKLSRMKRKLTLFQITMYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLADTINTV
                                   YLYRGLSTGD PTC+QCL IHEKLTERAGLGCILR L+DT NTV
Subjt:  RDISLLEMTKTKLSRMKRKLTLFQITMYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLADTINTV
Q9M117 Actin-related protein 2/3 complex subunit 5A1.1e-5569.88Show/hide
Query:  EFVEADNAEAIITRIEHKSRKIESLLKQSRPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKVSPKPLGHERDISL
        EFVEADNAEAII RIE KSRKIESLLKQ + VEALKTALEGSPP TRDERCKSANWIVVHRALMAIKD+DGM ++LD EYYDILMK              
Subjt:  EFVEADNAEAIITRIEHKSRKIESLLKQSRPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKVSPKPLGHERDISL

Query:  LEMTKTKLSRMKRKLTLFQITMYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLADTINTV
                              YLYRGLSTGDRPTCDQCL+IHEKLTERAGLGCILR L DTINTV
Subjt:  LEMTKTKLSRMKRKLTLFQITMYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLADTINTV
Arabidopsis top hitse value%identityAlignment
AT4G01710.1 ARP2/3 complex 16 kDa subunit (p16-Arc)7.6e-5769.88Show/hide
Query:  EFVEADNAEAIITRIEHKSRKIESLLKQSRPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKVSPKPLGHERDISL
        EFVEADNAEAII RIE KSRKIESLLKQ + VEALKTALEGSPP TRDERCKSANWIVVHRALMAIKD+DGM ++LD EYYDILMK              
Subjt:  EFVEADNAEAIITRIEHKSRKIESLLKQSRPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKVSPKPLGHERDISL

Query:  LEMTKTKLSRMKRKLTLFQITMYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLADTINTV
                              YLYRGLSTGDRPTCDQCL+IHEKLTERAGLGCILR L DTINTV
Subjt:  LEMTKTKLSRMKRKLTLFQITMYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLADTINTV
AT5G65274.1 ARP2/3 complex 16 kDa subunit (p16-Arc)6.3e-5161.99Show/hide
Query:  MATTGEFVEADNAEAIITRIEHKSRKIESLLKQSRPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKVSPKPLGHE
        MA    FVEADNAE I+ RIE KS+KIESLLK  + VEALKTAL+GSPP T DERCKSANWIVVHRA+MAIKD++GM +SL  EYYDILMK         
Subjt:  MATTGEFVEADNAEAIITRIEHKSRKIESLLKQSRPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKVSPKPLGHE

Query:  RDISLLEMTKTKLSRMKRKLTLFQITMYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLADTINTV
                                   YLYRGLSTGD PTC+QCL IHEKLTERAGLGCILR L+DT NTV
Subjt:  RDISLLEMTKTKLSRMKRKLTLFQITMYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLADTINTV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACTACAGGTGAATTTGTGGAAGCAGATAATGCAGAAGCCATAATCACCAGAATTGAGCACAAATCTCGAAAGATCGAGAGCTTACTTAAACAGTCTAGACCAGT
CGAAGCTCTTAAAACTGCTCTCGAAGGTTCCCCTCCAAATACCCGAGATGAGCGCTGCAAGTCAGCAAATTGGATTGTGGTGCATAGGGCTCTCATGGCTATAAAGGATG
TAGATGGGATGTTTTCTTCGTTGGATCCAGAGTACTATGATATTCTAATGAAAGTTTCTCCAAAGCCACTTGGCCATGAACGTGATATTTCTTTGCTTGAGATGACCAAG
ACTAAACTCTCAAGGATGAAGAGGAAGCTTACTCTTTTCCAAATCACAATGTACTTGTACAGAGGGTTGTCAACTGGTGATCGTCCTACATGTGATCAATGTCTCAGGAT
ACATGAAAAATTGACGGAAAGGGCTGGCTTAGGTTGCATTCTCCGTTCTCTTGCAGATACTATTAATACCGTTTGA
mRNA sequenceShow/hide mRNA sequence
CCGACCTTCACCTGCCGCATAAACATTGAAAGAAAGGATCGTGAAAATCAACATCATAGGCAGATTGCGCTGATTTTAGGTCCGATTTCTTTCATACAACCGTTGGAATA
TTGATTTGTACTGGTATGATCAGTTTTCTGTTAAGCTCGAGAAAATCCTACTGGAAGTAGGGTGATAGCGGAAGGCGAAAATGGCGACTACAGGTGAATTTGTGGAAGCA
GATAATGCAGAAGCCATAATCACCAGAATTGAGCACAAATCTCGAAAGATCGAGAGCTTACTTAAACAGTCTAGACCAGTCGAAGCTCTTAAAACTGCTCTCGAAGGTTC
CCCTCCAAATACCCGAGATGAGCGCTGCAAGTCAGCAAATTGGATTGTGGTGCATAGGGCTCTCATGGCTATAAAGGATGTAGATGGGATGTTTTCTTCGTTGGATCCAG
AGTACTATGATATTCTAATGAAAGTTTCTCCAAAGCCACTTGGCCATGAACGTGATATTTCTTTGCTTGAGATGACCAAGACTAAACTCTCAAGGATGAAGAGGAAGCTT
ACTCTTTTCCAAATCACAATGTACTTGTACAGAGGGTTGTCAACTGGTGATCGTCCTACATGTGATCAATGTCTCAGGATACATGAAAAATTGACGGAAAGGGCTGGCTT
AGGTTGCATTCTCCGTTCTCTTGCAGATACTATTAATACCGTTTGAACTTTTGGCTAATGAAATGTTGGAAATATTATTATTCTCGCATATAGATGTCATACTCAGAGCT
GAAATATACTCAATTCTTTCTAATTTTGACACCTCTAAATTGCTTTTCAGATTGTGATTTATGTCAAGCA
Protein sequenceShow/hide protein sequence
MATTGEFVEADNAEAIITRIEHKSRKIESLLKQSRPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKVSPKPLGHERDISLLEMTK
TKLSRMKRKLTLFQITMYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLADTINTV