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CcUC11G215710 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC11G215710
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionTransposase
Genome locationCicolChr11:8327283..8345317
RNA-Seq ExpressionCcUC11G215710
SyntenyCcUC11G215710
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046001.1 transposase [Cucumis melo var. makuwa]4.9e-2237.82Show/hide
Query:  PEKYSDIDQEQWTSFVNGRLSKEWEAYSCVQRERRSKCVYSHHISRKGYVNLAHGLMQYVKLKCFDRSIGDVASKEENVGRVNVSRDKTHSEQSHQPRSS
        P+ YS I+QE W SFV+ RLS+EWE YS +QRERRSKCVY+HH+SRKGY NLA  L + V     +  + D    +E+ GR + SR K+  ++S+  RSS
Subjt:  PEKYSDIDQEQWTSFVNGRLSKEWEAYSCVQRERRSKCVYSHHISRKGYVNLAHGLMQYVKLKCFDRSIGDVASKEENVGRVNVSRDKTHSEQSHQPRSS

Query:  IASVSLSASEEED------VDSVP-----------------------------------------KKSFMGKIETLNQAMGNFVTWPQKLFNT
        I S+++    +ED      V+  P                                           S  GKIETLNQA+GN + WP++L +T
Subjt:  IASVSLSASEEED------VDSVP-----------------------------------------KKSFMGKIETLNQAMGNFVTWPQKLFNT

KAA0067800.1 uncharacterized protein E6C27_scaffold2484G00030 [Cucumis melo var. makuwa]1.5e-1832.73Show/hide
Query:  PEKYSDIDQEQWTSFVNGRLSKEWEAYSCVQRERRSKCVYSHHISRKGYVNLAHGLMQYVKLKCFDRSIGDVASKEENVGRV------------------
        P+ YSDI++E W SFV+ RL +EWE YS +QRERRSKCVY+HH+SRKGY NLA  L + V     +  + D    +E+ GRV                  
Subjt:  PEKYSDIDQEQWTSFVNGRLSKEWEAYSCVQRERRSKCVYSHHISRKGYVNLAHGLMQYVKLKCFDRSIGDVASKEENVGRV------------------

Query:  ---------NVSRDKTHSEQSHQPRSSIASVSLSASEEED-----------------------------------------VDSVPKKSF------MGKI
                 + SR K+  ++S+  +SSI S+++    +ED                                         VD V  ++        GKI
Subjt:  ---------NVSRDKTHSEQSHQPRSSIASVSLSASEEED-----------------------------------------VDSVPKKSF------MGKI

Query:  ETLNQAMGNFVTWPQKLFNT
        ETLNQA+GN + WP++L +T
Subjt:  ETLNQAMGNFVTWPQKLFNT

TYJ96621.1 transposase [Cucumis melo var. makuwa]3.9e-1933.64Show/hide
Query:  PEKYSDIDQEQWTSFVNGRLSKEWEAYSCVQRERRSKCVYSHHISRKGYVNLAHGLMQYVKLKCFDRSIGDVASKEENVGRV------------------
        P+ YS I+QE W SFV+ RLS+EWE YS +QRERRSKCVY+HH+SRKGY NLA  L + V     +  + D    +E+ GRV                  
Subjt:  PEKYSDIDQEQWTSFVNGRLSKEWEAYSCVQRERRSKCVYSHHISRKGYVNLAHGLMQYVKLKCFDRSIGDVASKEENVGRV------------------

Query:  ---------NVSRDKTHSEQSHQPRSSIASVSLSASEEED-----------------------------------------VDSVPKKSF------MGKI
                 + SR K+  ++S+  RSSI S+++    +ED                                         VD V  ++        GKI
Subjt:  ---------NVSRDKTHSEQSHQPRSSIASVSLSASEEED-----------------------------------------VDSVPKKSF------MGKI

Query:  ETLNQAMGNFVTWPQKLFNT
        ETLNQA+GN + WP++L +T
Subjt:  ETLNQAMGNFVTWPQKLFNT

TYK20855.1 transposase [Cucumis melo var. makuwa]3.9e-1933.64Show/hide
Query:  PEKYSDIDQEQWTSFVNGRLSKEWEAYSCVQRERRSKCVYSHHISRKGYVNLAHGLMQYVKLKCFDRSIGDVASKEENVGRV------------------
        P+ YS I+QE W SFV+ RLS+EWE YS +QRERRSKCVY+HH+SRKGY NLA  L + V     +  + D    +E+ GRV                  
Subjt:  PEKYSDIDQEQWTSFVNGRLSKEWEAYSCVQRERRSKCVYSHHISRKGYVNLAHGLMQYVKLKCFDRSIGDVASKEENVGRV------------------

Query:  ---------NVSRDKTHSEQSHQPRSSIASVSLSASEEED-----------------------------------------VDSVPKKSF------MGKI
                 + SR K+  ++S+  RSSI S+++    +ED                                         VD V  ++        GKI
Subjt:  ---------NVSRDKTHSEQSHQPRSSIASVSLSASEEED-----------------------------------------VDSVPKKSF------MGKI

Query:  ETLNQAMGNFVTWPQKLFNT
        ETLNQA+GN + WP++L +T
Subjt:  ETLNQAMGNFVTWPQKLFNT

TYK27996.1 transposase [Cucumis melo var. makuwa]3.9e-1933.64Show/hide
Query:  PEKYSDIDQEQWTSFVNGRLSKEWEAYSCVQRERRSKCVYSHHISRKGYVNLAHGLMQYVKLKCFDRSIGDVASKEENVGRV------------------
        P+ YS I+QE W SFV+ RLS+EWE YS +QRERRSKCVY+HH+SRKGY NLA  L + V     +  + D    +E+ GRV                  
Subjt:  PEKYSDIDQEQWTSFVNGRLSKEWEAYSCVQRERRSKCVYSHHISRKGYVNLAHGLMQYVKLKCFDRSIGDVASKEENVGRV------------------

Query:  ---------NVSRDKTHSEQSHQPRSSIASVSLSASEEED-----------------------------------------VDSVPKKSF------MGKI
                 + SR K+  ++S+  RSSI S+++    +ED                                         VD V  ++        GKI
Subjt:  ---------NVSRDKTHSEQSHQPRSSIASVSLSASEEED-----------------------------------------VDSVPKKSF------MGKI

Query:  ETLNQAMGNFVTWPQKLFNT
        ETLNQA+GN + WP++L +T
Subjt:  ETLNQAMGNFVTWPQKLFNT

TrEMBL top hitse value%identityAlignment
A0A5A7TX04 Transposase2.4e-2237.82Show/hide
Query:  PEKYSDIDQEQWTSFVNGRLSKEWEAYSCVQRERRSKCVYSHHISRKGYVNLAHGLMQYVKLKCFDRSIGDVASKEENVGRVNVSRDKTHSEQSHQPRSS
        P+ YS I+QE W SFV+ RLS+EWE YS +QRERRSKCVY+HH+SRKGY NLA  L + V     +  + D    +E+ GR + SR K+  ++S+  RSS
Subjt:  PEKYSDIDQEQWTSFVNGRLSKEWEAYSCVQRERRSKCVYSHHISRKGYVNLAHGLMQYVKLKCFDRSIGDVASKEENVGRVNVSRDKTHSEQSHQPRSS

Query:  IASVSLSASEEED------VDSVP-----------------------------------------KKSFMGKIETLNQAMGNFVTWPQKLFNT
        I S+++    +ED      V+  P                                           S  GKIETLNQA+GN + WP++L +T
Subjt:  IASVSLSASEEED------VDSVP-----------------------------------------KKSFMGKIETLNQAMGNFVTWPQKLFNT

A0A5A7VKR6 ULP_PROTEASE domain-containing protein7.2e-1932.73Show/hide
Query:  PEKYSDIDQEQWTSFVNGRLSKEWEAYSCVQRERRSKCVYSHHISRKGYVNLAHGLMQYVKLKCFDRSIGDVASKEENVGRV------------------
        P+ YSDI++E W SFV+ RL +EWE YS +QRERRSKCVY+HH+SRKGY NLA  L + V     +  + D    +E+ GRV                  
Subjt:  PEKYSDIDQEQWTSFVNGRLSKEWEAYSCVQRERRSKCVYSHHISRKGYVNLAHGLMQYVKLKCFDRSIGDVASKEENVGRV------------------

Query:  ---------NVSRDKTHSEQSHQPRSSIASVSLSASEEED-----------------------------------------VDSVPKKSF------MGKI
                 + SR K+  ++S+  +SSI S+++    +ED                                         VD V  ++        GKI
Subjt:  ---------NVSRDKTHSEQSHQPRSSIASVSLSASEEED-----------------------------------------VDSVPKKSF------MGKI

Query:  ETLNQAMGNFVTWPQKLFNT
        ETLNQA+GN + WP++L +T
Subjt:  ETLNQAMGNFVTWPQKLFNT

A0A5D3C2U9 Transposase1.9e-1933.64Show/hide
Query:  PEKYSDIDQEQWTSFVNGRLSKEWEAYSCVQRERRSKCVYSHHISRKGYVNLAHGLMQYVKLKCFDRSIGDVASKEENVGRV------------------
        P+ YS I+QE W SFV+ RLS+EWE YS +QRERRSKCVY+HH+SRKGY NLA  L + V     +  + D    +E+ GRV                  
Subjt:  PEKYSDIDQEQWTSFVNGRLSKEWEAYSCVQRERRSKCVYSHHISRKGYVNLAHGLMQYVKLKCFDRSIGDVASKEENVGRV------------------

Query:  ---------NVSRDKTHSEQSHQPRSSIASVSLSASEEED-----------------------------------------VDSVPKKSF------MGKI
                 + SR K+  ++S+  RSSI S+++    +ED                                         VD V  ++        GKI
Subjt:  ---------NVSRDKTHSEQSHQPRSSIASVSLSASEEED-----------------------------------------VDSVPKKSF------MGKI

Query:  ETLNQAMGNFVTWPQKLFNT
        ETLNQA+GN + WP++L +T
Subjt:  ETLNQAMGNFVTWPQKLFNT

A0A5D3DBD0 Transposase1.9e-1933.64Show/hide
Query:  PEKYSDIDQEQWTSFVNGRLSKEWEAYSCVQRERRSKCVYSHHISRKGYVNLAHGLMQYVKLKCFDRSIGDVASKEENVGRV------------------
        P+ YS I+QE W SFV+ RLS+EWE YS +QRERRSKCVY+HH+SRKGY NLA  L + V     +  + D    +E+ GRV                  
Subjt:  PEKYSDIDQEQWTSFVNGRLSKEWEAYSCVQRERRSKCVYSHHISRKGYVNLAHGLMQYVKLKCFDRSIGDVASKEENVGRV------------------

Query:  ---------NVSRDKTHSEQSHQPRSSIASVSLSASEEED-----------------------------------------VDSVPKKSF------MGKI
                 + SR K+  ++S+  RSSI S+++    +ED                                         VD V  ++        GKI
Subjt:  ---------NVSRDKTHSEQSHQPRSSIASVSLSASEEED-----------------------------------------VDSVPKKSF------MGKI

Query:  ETLNQAMGNFVTWPQKLFNT
        ETLNQA+GN + WP++L +T
Subjt:  ETLNQAMGNFVTWPQKLFNT

A0A5D3DW77 Transposase1.9e-1933.64Show/hide
Query:  PEKYSDIDQEQWTSFVNGRLSKEWEAYSCVQRERRSKCVYSHHISRKGYVNLAHGLMQYVKLKCFDRSIGDVASKEENVGRV------------------
        P+ YS I+QE W SFV+ RLS+EWE YS +QRERRSKCVY+HH+SRKGY NLA  L + V     +  + D    +E+ GRV                  
Subjt:  PEKYSDIDQEQWTSFVNGRLSKEWEAYSCVQRERRSKCVYSHHISRKGYVNLAHGLMQYVKLKCFDRSIGDVASKEENVGRV------------------

Query:  ---------NVSRDKTHSEQSHQPRSSIASVSLSASEEED-----------------------------------------VDSVPKKSF------MGKI
                 + SR K+  ++S+  RSSI S+++    +ED                                         VD V  ++        GKI
Subjt:  ---------NVSRDKTHSEQSHQPRSSIASVSLSASEEED-----------------------------------------VDSVPKKSF------MGKI

Query:  ETLNQAMGNFVTWPQKLFNT
        ETLNQA+GN + WP++L +T
Subjt:  ETLNQAMGNFVTWPQKLFNT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATATTCATACATGGAGGATTCAAGTAGTAGTAGCGAAGATGAGGAAGAAGGTTTGCGTCACGTGGCCCAACTACCATACTTCTCCTGAAAAATATTCTGATATAGA
TCAAGAACAATGGACATCATTTGTTAATGGTAGACTAAGTAAAGAGTGGGAGGCATATAGTTGTGTTCAGAGAGAAAGAAGGTCAAAATGCGTATACAGTCATCACATTT
CTCGTAAGGGATATGTGAATCTCGCCCATGGATTAATGCAGTATGTAAAGTTGAAATGTTTTGACCGAAGCATTGGAGACGTAGCATCTAAAGAAGAGAATGTTGGAAGG
GTCAATGTTTCAAGAGACAAAACTCATAGTGAACAATCTCATCAACCTAGATCTTCTATTGCAAGTGTCTCATTAAGTGCATCTGAAGAAGAAGATGTTGACAGTGTGCC
TAAAAAGAGTTTTATGGGGAAAATCGAGACTTTGAATCAAGCCATGGGTAACTTCGTAACATGGCCTCAAAAGCTTTTCAATACAAAAAGTGCATATACGCAAGAGGAGA
TTGATGAAGTTCGAATACATTGGCAATTTCCAGGGGGCGAGTGGTCCCATATATGCTTTTGGGGGTGGTTAGTTAAGTTTGGCTCAAGTTTTGATCACCCATTGGGTTTT
GAGTTCATATTTGGAGGCGTGAGTAGGCTCGAAGCCACTGTCTACCGAGGATTTCATTCACTTGGAAAGTTGGCGCCTTCTTCTTTTGCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATATTCATACATGGAGGATTCAAGTAGTAGTAGCGAAGATGAGGAAGAAGGTTTGCGTCACGTGGCCCAACTACCATACTTCTCCTGAAAAATATTCTGATATAGA
TCAAGAACAATGGACATCATTTGTTAATGGTAGACTAAGTAAAGAGTGGGAGGCATATAGTTGTGTTCAGAGAGAAAGAAGGTCAAAATGCGTATACAGTCATCACATTT
CTCGTAAGGGATATGTGAATCTCGCCCATGGATTAATGCAGTATGTAAAGTTGAAATGTTTTGACCGAAGCATTGGAGACGTAGCATCTAAAGAAGAGAATGTTGGAAGG
GTCAATGTTTCAAGAGACAAAACTCATAGTGAACAATCTCATCAACCTAGATCTTCTATTGCAAGTGTCTCATTAAGTGCATCTGAAGAAGAAGATGTTGACAGTGTGCC
TAAAAAGAGTTTTATGGGGAAAATCGAGACTTTGAATCAAGCCATGGGTAACTTCGTAACATGGCCTCAAAAGCTTTTCAATACAAAAAGTGCATATACGCAAGAGGAGA
TTGATGAAGTTCGAATACATTGGCAATTTCCAGGGGGCGAGTGGTCCCATATATGCTTTTGGGGGTGGTTAGTTAAGTTTGGCTCAAGTTTTGATCACCCATTGGGTTTT
GAGTTCATATTTGGAGGCGTGAGTAGGCTCGAAGCCACTGTCTACCGAGGATTTCATTCACTTGGAAAGTTGGCGCCTTCTTCTTTTGCCTAA
Protein sequenceShow/hide protein sequence
MNIHTWRIQVVVAKMRKKVCVTWPNYHTSPEKYSDIDQEQWTSFVNGRLSKEWEAYSCVQRERRSKCVYSHHISRKGYVNLAHGLMQYVKLKCFDRSIGDVASKEENVGR
VNVSRDKTHSEQSHQPRSSIASVSLSASEEEDVDSVPKKSFMGKIETLNQAMGNFVTWPQKLFNTKSAYTQEEIDEVRIHWQFPGGEWSHICFWGWLVKFGSSFDHPLGF
EFIFGGVSRLEATVYRGFHSLGKLAPSSFA