; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC11G215860 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC11G215860
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionProtein PCF11-like
Genome locationCicolChr11:8634727..8635209
RNA-Seq ExpressionCcUC11G215860
SyntenyCcUC11G215860
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022939119.1 uncharacterized protein LOC111445119 [Cucurbita moschata]6.2e-7191.25Show/hide
Query:  MATLHKFKLLASQCAVAGSPTPSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSTDPQDVDDHDDDDHNMISEKNEKEVRARRKLKDLFVSSPPLE
        MATLHKFKLLASQCAVAG PT SPTASPV HLRRRRRKTLRMLLNR DRRRFPYQDNS DPQDVDD DDDD NMI EKN+KEVRARRKLKDLFVSSPPLE
Subjt:  MATLHKFKLLASQCAVAGSPTPSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSTDPQDVDDHDDDDHNMISEKNEKEVRARRKLKDLFVSSPPLE

Query:  DKVSDRRIEEQEGLLTAANTSAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE
        DKVSDRRIEEQE LLT ANTSAAGIG+PS TRRSLRPISATFRYRFLRRAWRPVLV IPE
Subjt:  DKVSDRRIEEQEGLLTAANTSAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE

XP_022993370.1 uncharacterized protein LOC111489414 [Cucurbita maxima]1.6e-7191.88Show/hide
Query:  MATLHKFKLLASQCAVAGSPTPSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSTDPQDVDDHDDDDHNMISEKNEKEVRARRKLKDLFVSSPPLE
        MATLHKFKLLASQCAVAG PT SPTASPV HLRRRRRKTLRMLLNRTDRRRFPYQDNS DPQDVDD DDDD NMI EKN+KEVRARRKLKDLFVSSPPLE
Subjt:  MATLHKFKLLASQCAVAGSPTPSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSTDPQDVDDHDDDDHNMISEKNEKEVRARRKLKDLFVSSPPLE

Query:  DKVSDRRIEEQEGLLTAANTSAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE
        DKVSDRRIEEQE LLT ANTSAAGIG+PS TRRSLRPISATFRYRFLRRAWRPVLV IPE
Subjt:  DKVSDRRIEEQEGLLTAANTSAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE

XP_023546418.1 uncharacterized protein LOC111805523 [Cucurbita pepo subsp. pepo]5.3e-7091.88Show/hide
Query:  MATLHKFKLLASQCAVAGSPTPSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSTDPQDVDDHDDDDHNMISEKNEKEVRARRKLKDLFVSSPPLE
        MATLHKFKLLASQCAV GSPT SPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQD S DPQDVDD DDDD NMI EKN+KEVRARRKLKDLFVSSPPLE
Subjt:  MATLHKFKLLASQCAVAGSPTPSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSTDPQDVDDHDDDDHNMISEKNEKEVRARRKLKDLFVSSPPLE

Query:  DKVSDRRIEEQEGLLTAANTSAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE
        DKVSDRRIEEQEGLLTA N SAAGIG+ STTRRSLRPIS TFRYRFLRRAWRPVLVAIPE
Subjt:  DKVSDRRIEEQEGLLTAANTSAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE

XP_023551541.1 uncharacterized protein LOC111809331 [Cucurbita pepo subsp. pepo]1.8e-7090.62Show/hide
Query:  MATLHKFKLLASQCAVAGSPTPSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSTDPQDVDDHDDDDHNMISEKNEKEVRARRKLKDLFVSSPPLE
        MATLHKFKLLASQCAVAG PT SPTASPV HLRRRRRKTLRMLLNR DRRRFPYQDNS DPQDVDD DDDD NMI EKN+KEVRARRKLKDLFVSSPPLE
Subjt:  MATLHKFKLLASQCAVAGSPTPSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSTDPQDVDDHDDDDHNMISEKNEKEVRARRKLKDLFVSSPPLE

Query:  DKVSDRRIEEQEGLLTAANTSAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE
        DKVSDRRIEEQE LLT ANT AAGIG+PS TRRSLRPISATFRYRFLRRAWRPVLV IPE
Subjt:  DKVSDRRIEEQEGLLTAANTSAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE

XP_038885993.1 uncharacterized protein LOC120076298 [Benincasa hispida]2.1e-7193.12Show/hide
Query:  MATLHKFKLLASQCAVAGSPTPSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSTDPQDVDDHDDDDHNMISEKNEKEVRARRKLKDLFVSSPPLE
        MATLHKFKLLASQCAVAGSPT SP ASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNS D QDVDD DDD   MI EKNEKEVRARRKLKDLFVSSPPLE
Subjt:  MATLHKFKLLASQCAVAGSPTPSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSTDPQDVDDHDDDDHNMISEKNEKEVRARRKLKDLFVSSPPLE

Query:  DKVSDRRIEEQEGLLTAANTSAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE
        DKVSDRRIEE+EG LTAANTSAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE
Subjt:  DKVSDRRIEEQEGLLTAANTSAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE

TrEMBL top hitse value%identityAlignment
A0A6J1BYN1 uncharacterized protein LOC1110064611.1e-6891.25Show/hide
Query:  MATLHKFKLLASQCAVAGSPTPSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSTDPQDVDDHDDDDHNMISEKNEKEVRARRKLKDLFVSSPPLE
        MATLHKFKLLASQC VAGSPT SPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNS DPQDVDD ++DD NMI EKNEKEVRARRKLKDLFVSSPP +
Subjt:  MATLHKFKLLASQCAVAGSPTPSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSTDPQDVDDHDDDDHNMISEKNEKEVRARRKLKDLFVSSPPLE

Query:  DKVSDRRIEEQEGLLTAANTSAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE
        DKVSDRRIEEQEGLLTA+NTSAAGIG+ STTRRSLRPIS+TFRYRFLRRAWRPVLVAIPE
Subjt:  DKVSDRRIEEQEGLLTAANTSAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE

A0A6J1FG66 uncharacterized protein LOC1114451193.0e-7191.25Show/hide
Query:  MATLHKFKLLASQCAVAGSPTPSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSTDPQDVDDHDDDDHNMISEKNEKEVRARRKLKDLFVSSPPLE
        MATLHKFKLLASQCAVAG PT SPTASPV HLRRRRRKTLRMLLNR DRRRFPYQDNS DPQDVDD DDDD NMI EKN+KEVRARRKLKDLFVSSPPLE
Subjt:  MATLHKFKLLASQCAVAGSPTPSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSTDPQDVDDHDDDDHNMISEKNEKEVRARRKLKDLFVSSPPLE

Query:  DKVSDRRIEEQEGLLTAANTSAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE
        DKVSDRRIEEQE LLT ANTSAAGIG+PS TRRSLRPISATFRYRFLRRAWRPVLV IPE
Subjt:  DKVSDRRIEEQEGLLTAANTSAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE

A0A6J1H7N8 uncharacterized protein LOC1114609057.4e-7091.25Show/hide
Query:  MATLHKFKLLASQCAVAGSPTPSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSTDPQDVDDHDDDDHNMISEKNEKEVRARRKLKDLFVSSPPLE
        MATLHKFKLLASQCAV GSPT SPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQD S DPQDVDD DDDD NMI EKN+KEV+ARRKLKDLFVSSPPLE
Subjt:  MATLHKFKLLASQCAVAGSPTPSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSTDPQDVDDHDDDDHNMISEKNEKEVRARRKLKDLFVSSPPLE

Query:  DKVSDRRIEEQEGLLTAANTSAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE
        DKVSDRRIEEQEGLLTA N SAAGIG+ STTRRSLRPIS TFRYRFLRRAWRPVLVAIPE
Subjt:  DKVSDRRIEEQEGLLTAANTSAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE

A0A6J1JSX9 uncharacterized protein LOC1114875515.7e-7091.88Show/hide
Query:  MATLHKFKLLASQCAVAGSPTPSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSTDPQDVDDHDDDDHNMISEKNEKEVRARRKLKDLFVSSPPLE
        MATLHKFKLLASQCAV GSPT SPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQD S DPQDVDD DDDD NMI EKN+KEVRARRKLKDLFVSSPPLE
Subjt:  MATLHKFKLLASQCAVAGSPTPSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSTDPQDVDDHDDDDHNMISEKNEKEVRARRKLKDLFVSSPPLE

Query:  DKVSDRRIEEQEGLLTAANTSAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE
        D VSDRRIEEQEGLLTA NTSAAGIG+ STTRRSLRPIS TFRYRFLRRAWRPVLVAIPE
Subjt:  DKVSDRRIEEQEGLLTAANTSAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE

A0A6J1JYC4 uncharacterized protein LOC1114894148.0e-7291.88Show/hide
Query:  MATLHKFKLLASQCAVAGSPTPSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSTDPQDVDDHDDDDHNMISEKNEKEVRARRKLKDLFVSSPPLE
        MATLHKFKLLASQCAVAG PT SPTASPV HLRRRRRKTLRMLLNRTDRRRFPYQDNS DPQDVDD DDDD NMI EKN+KEVRARRKLKDLFVSSPPLE
Subjt:  MATLHKFKLLASQCAVAGSPTPSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSTDPQDVDDHDDDDHNMISEKNEKEVRARRKLKDLFVSSPPLE

Query:  DKVSDRRIEEQEGLLTAANTSAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE
        DKVSDRRIEEQE LLT ANTSAAGIG+PS TRRSLRPISATFRYRFLRRAWRPVLV IPE
Subjt:  DKVSDRRIEEQEGLLTAANTSAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G66890.1 FUNCTIONS IN: molecular_function unknown4.8e-2144Show/hide
Query:  TLHKFKLLASQCAVAGSPTPSPTASPVIHLRRRRRKTLRMLLNR-TDRRRFPYQDNSTDPQDVDDHDDDDHNMISEKNEK--EVRARRKLKDLFVSSPPL
        +L KFKLLA+ C+       SPT SPVIHL  RRRKTLR+LL R +DR R P   N+ D               S+K +K  ++R+ RKL DLFVSSPP 
Subjt:  TLHKFKLLASQCAVAGSPTPSPTASPVIHLRRRRRKTLRMLLNR-TDRRRFPYQDNSTDPQDVDDHDDDDHNMISEKNEK--EVRARRKLKDLFVSSPPL

Query:  E--------DKVSDRRIEEQEGLLTAANTSAAGIGSPSTTRR-----SLRPISA-TFRYRFLRRAWRPVLVAIPE
        E        DK +   +E +  +     ++ AG G   T RR     S+RP+S+ T R R LRR+WRPVLV IPE
Subjt:  E--------DKVSDRRIEEQEGLLTAANTSAAGIGSPSTTRR-----SLRPISA-TFRYRFLRRAWRPVLVAIPE

AT1G68430.1 unknown protein1.1e-0934.94Show/hide
Query:  MATLHKFKLLASQCAVAG-SPT--PSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSTDPQDVDDHDDDDHNMISEKNEKEVRARRKLKDLFVSSP
        MATL +FK L +QC VA  SPT  PSP  SP++ L RR++ TL+MLL+     R   Q                   +   + K+V A RKLKDLFVSS 
Subjt:  MATLHKFKLLASQCAVAG-SPT--PSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSTDPQDVDDHDDDDHNMISEKNEKEVRARRKLKDLFVSSP

Query:  PLEDKVSD---RRIEEQEGLLTAANTSAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE
          E++  +    + + +E +L A                   P+   F  R L+RAWRP L  I E
Subjt:  PLEDKVSD---RRIEEQEGLLTAANTSAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE

AT5G16200.1 50S ribosomal protein-related2.7e-1639.88Show/hide
Query:  MATLHKFKLLAS----QCAVAGSPTPSPTASPVIHLRRRRRKTLRMLLNR-TDRRRFPYQDNSTDPQDVDDHDDDDHNMISEKNEKEVRARRKLKDLFVS
        ++ LHKFKL A+    + + AGSPT SPT SPV +L  RRRKTLRML ++ +D RR   +      Q +++  + D N  ++K       RRKL++L V+
Subjt:  MATLHKFKLLAS----QCAVAGSPTPSPTASPVIHLRRRRRKTLRMLLNR-TDRRRFPYQDNSTDPQDVDDHDDDDHNMISEKNEKEVRARRKLKDLFVS

Query:  --SPPLEDKVSDRRIEEQEGLLTAANTSAAGIGSPSTTRRSLRPISA-TFRYRFLRRAWRPVLVAIPE
          SPP + +     I E+   ++  N ++ G G   T RR     S  +FR R LR+ WRPVLV+IPE
Subjt:  --SPPLEDKVSDRRIEEQEGLLTAANTSAAGIGSPSTTRRSLRPISA-TFRYRFLRRAWRPVLVAIPE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACTTTGCATAAATTCAAGCTCTTAGCCTCTCAATGTGCCGTCGCTGGTAGCCCTACTCCAAGCCCCACTGCTAGTCCCGTCATTCACCTCCGCCGCCGCCGCCG
CAAAACCCTAAGAATGCTCCTCAATCGCACCGATCGCCGCCGATTTCCCTATCAAGATAACTCCACTGATCCTCAAGATGTCGACGACCACGACGACGATGACCACAATA
TGATTTCGGAGAAAAACGAGAAGGAAGTCCGAGCCAGACGGAAACTCAAGGATTTGTTCGTCTCGTCGCCGCCGCTCGAGGATAAGGTTTCCGATAGGAGAATAGAAGAA
CAGGAGGGATTGTTAACGGCGGCCAACACCAGCGCCGCTGGAATCGGTTCGCCATCTACCACTCGCCGCTCTCTTAGACCAATCTCGGCCACATTTCGGTACAGATTTCT
CCGGCGAGCTTGGCGGCCGGTGCTCGTTGCCATTCCCGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTACTTTGCATAAATTCAAGCTCTTAGCCTCTCAATGTGCCGTCGCTGGTAGCCCTACTCCAAGCCCCACTGCTAGTCCCGTCATTCACCTCCGCCGCCGCCGCCG
CAAAACCCTAAGAATGCTCCTCAATCGCACCGATCGCCGCCGATTTCCCTATCAAGATAACTCCACTGATCCTCAAGATGTCGACGACCACGACGACGATGACCACAATA
TGATTTCGGAGAAAAACGAGAAGGAAGTCCGAGCCAGACGGAAACTCAAGGATTTGTTCGTCTCGTCGCCGCCGCTCGAGGATAAGGTTTCCGATAGGAGAATAGAAGAA
CAGGAGGGATTGTTAACGGCGGCCAACACCAGCGCCGCTGGAATCGGTTCGCCATCTACCACTCGCCGCTCTCTTAGACCAATCTCGGCCACATTTCGGTACAGATTTCT
CCGGCGAGCTTGGCGGCCGGTGCTCGTTGCCATTCCCGAGTAG
Protein sequenceShow/hide protein sequence
MATLHKFKLLASQCAVAGSPTPSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSTDPQDVDDHDDDDHNMISEKNEKEVRARRKLKDLFVSSPPLEDKVSDRRIEE
QEGLLTAANTSAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE