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CcUC11G215890 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC11G215890
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Descriptionzinc finger protein 6-like
Genome locationCicolChr11:8659652..8660113
RNA-Seq ExpressionCcUC11G215890
SyntenyCcUC11G215890
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009736 - cytokinin-activated signaling pathway (biological process)
GO:0009740 - gibberellic acid mediated signaling pathway (biological process)
GO:0010090 - trichome morphogenesis (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily
IPR044299 - Zinc finger protein GIS3/ZFP5/ZFP6


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578343.1 Zinc finger protein 6, partial [Cucurbita argyrosperma subsp. sororia]2.4e-4868.48Show/hide
Query:  MPKSQLKLFGFNISKENKKVSNFIEPPAVEWLESQSLHAPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSWHPNYFTALHVQNWLSSSFTPP
        M  SQLKLFGFNIS+++K VSNF EPP  E  ES+  HAPKFECQYCCR FSNSQALGGHQNAHREER+LLKRAQ+KS H NYFT LHVQNWLSSSF P 
Subjt:  MPKSQLKLFGFNISKENKKVSNFIEPPAVEWLESQSLHAPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSWHPNYFTALHVQNWLSSSFTPP

Query:  PSPTVMGAPPPPPAGLYAM-----SQEVRRQAGV-------QGDEDVSGRSLGLDLQLSLGPGKP
        P  T     P   AGL+AM     SQ+V RQAGV        GDE V GR LGLDLQLSLGP KP
Subjt:  PSPTVMGAPPPPPAGLYAM-----SQEVRRQAGV-------QGDEDVSGRSLGLDLQLSLGPGKP

XP_022939247.1 zinc finger protein 6-like [Cucurbita moschata]3.2e-4867.88Show/hide
Query:  MPKSQLKLFGFNISKENKKVSNFIEPPAVEWLESQSLHAPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSWHPNYFTALHVQNWLSSSFTPP
        M  SQLKLFGFNIS+++K VSNF EPP  E  ES+  HAPKFECQYCCR FSNSQALGGHQNAHREER+LLKRAQ+KS H NYFT LH+ NWLSSSF P 
Subjt:  MPKSQLKLFGFNISKENKKVSNFIEPPAVEWLESQSLHAPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSWHPNYFTALHVQNWLSSSFTPP

Query:  PSPTVMGAPPPPPAGLYAM-----SQEVRRQAGV-------QGDEDVSGRSLGLDLQLSLGPGKP
        P P++    PP  AGL+AM     SQ+V RQAGV        GDE V GR LGLDLQLSLGP KP
Subjt:  PSPTVMGAPPPPPAGLYAM-----SQEVRRQAGV-------QGDEDVSGRSLGLDLQLSLGPGKP

XP_022993371.1 zinc finger protein 6-like [Cucurbita maxima]4.6e-4767.27Show/hide
Query:  MPKSQLKLFGFNISKENKKVSNFIEPPAVEWLESQSLHAPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSWHPNYFTALHVQNWLSSSFTPP
        M  SQLKLFGFNIS+ +  VSNF EPP  E  ES+  HAPKFECQYCCR FSNSQALGGHQNAHREER+LLKRAQ+KS H NYFT LHV+NWLSSSF P 
Subjt:  MPKSQLKLFGFNISKENKKVSNFIEPPAVEWLESQSLHAPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSWHPNYFTALHVQNWLSSSFTPP

Query:  PSPTVMGAPPPPPAGLYAM-----SQEVRRQAGV-------QGDEDVSGRSLGLDLQLSLGPGKP
        P  T     P   AGL+AM     SQ+V RQAGV        GDE V GR LGLDLQLSLGP KP
Subjt:  PSPTVMGAPPPPPAGLYAM-----SQEVRRQAGV-------QGDEDVSGRSLGLDLQLSLGPGKP

XP_023550962.1 zinc finger protein 6-like [Cucurbita pepo subsp. pepo]2.4e-4868.48Show/hide
Query:  MPKSQLKLFGFNISKENKKVSNFIEPPAVEWLESQSLHAPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSWHPNYFTALHVQNWLSSSFTPP
        M  SQLKLFGFNIS+++K VSNF EPP  E  ES+  HAPKFECQYCCR FSNSQALGGHQNAHREER+LLKRAQ+KS H NYFT LHVQNWLSSSF P 
Subjt:  MPKSQLKLFGFNISKENKKVSNFIEPPAVEWLESQSLHAPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSWHPNYFTALHVQNWLSSSFTPP

Query:  PSPTVMGAPPPPPAGLYAM-----SQEVRRQAGV-------QGDEDVSGRSLGLDLQLSLGPGKP
        P  T     P   AGL+AM     SQ+V RQAGV        GDE V GR LGLDLQLSLGP KP
Subjt:  PSPTVMGAPPPPPAGLYAM-----SQEVRRQAGV-------QGDEDVSGRSLGLDLQLSLGPGKP

XP_038886238.1 zinc finger protein 6-like [Benincasa hispida]7.6e-5875.3Show/hide
Query:  MPKSQLKLFGFNISKENKKVSNFIE-PPAVEWLESQSLHAPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSWHPNYFTALHVQNWLSSSFTP
        MPKS+LKLFGFNISKE K VSN  + PPA+EW ES++ HAPKFECQYCCREFSNSQALGGHQNAHREERQLLK AQMKS H NY TALHVQNWLSSSF P
Subjt:  MPKSQLKLFGFNISKENKKVSNFIE-PPAVEWLESQSLHAPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSWHPNYFTALHVQNWLSSSFTP

Query:  PPSPTVMGAPPPPPAGLYAM-----SQEVRRQA-------GVQGDEDVSGRSLGLDLQLSLGPGKP
        PP P V+G PP     +YAM     SQEVRRQA       GV GDEDVSG SLGLDLQLSLGPGKP
Subjt:  PPSPTVMGAPPPPPAGLYAM-----SQEVRRQA-------GVQGDEDVSGRSLGLDLQLSLGPGKP

TrEMBL top hitse value%identityAlignment
A0A0A0LQ31 C2H2-type domain-containing protein1.3e-2371.95Show/hide
Query:  SQLKLFGFNISKENKKVSNFIEPP-AVEWLESQSLHAPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSWHPNYF
        S LKLFGF+ISKENK+VSNF EPP  VE  ES++   PKFEC+YCCR+FSNSQALGGHQNAH+EERQLLK  Q+K +  NYF
Subjt:  SQLKLFGFNISKENKKVSNFIEPP-AVEWLESQSLHAPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSWHPNYF

A0A371HDT5 Chloroplastic group IIB intron splicing facilitator CRS2-A, chloroplastic (Fragment)3.0e-2053.15Show/hide
Query:  LKLFGFNISKENKKVSNFIEPPAVEWLESQSLHAPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSWHPNYFTALHVQNWLSSSFTPPPSPTV
        LKLFG NI+K  K  +   E    +     S  A K+EC+YCCREF+NSQALGGHQNAH++ERQLLKRAQM++     F A H+QN + S F+PP  P +
Subjt:  LKLFGFNISKENKKVSNFIEPPAVEWLESQSLHAPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSWHPNYFTALHVQNWLSSSFTPPPSPTV

Query:  MGAPPPPPAGL
        +  PPPPP  L
Subjt:  MGAPPPPPAGL

A0A6A1VGC0 Zinc finger protein 69.8e-1940.4Show/hide
Query:  LKLFGFNI---SKENKKVSNFIEPPAVEWLESQSLHAPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSWHPNYFTALHV-QNWLSSSFTPPP
        LKLFGFNI   S+EN   ++     + E    QS    K+ECQYCCREF+NSQALGGHQNAH++ERQLLKRAQM++       A H+ QN + S+FTPP 
Subjt:  LKLFGFNI---SKENKKVSNFIEPPAVEWLESQSLHAPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSWHPNYFTALHV-QNWLSSSFTPPP

Query:  SPTVMGAPPP-----------------PPAGLY-----------------------AMSQEVRRQAGV-------QGDEDVS--GRSLGLDLQLSLGP
              APP                  P  G Y                         S  V  +AGV        GD +VS   + LGLDLQL LGP
Subjt:  SPTVMGAPPP-----------------PPAGLY-----------------------AMSQEVRRQAGV-------QGDEDVS--GRSLGLDLQLSLGP

A0A6J1FG99 zinc finger protein 6-like1.5e-4867.88Show/hide
Query:  MPKSQLKLFGFNISKENKKVSNFIEPPAVEWLESQSLHAPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSWHPNYFTALHVQNWLSSSFTPP
        M  SQLKLFGFNIS+++K VSNF EPP  E  ES+  HAPKFECQYCCR FSNSQALGGHQNAHREER+LLKRAQ+KS H NYFT LH+ NWLSSSF P 
Subjt:  MPKSQLKLFGFNISKENKKVSNFIEPPAVEWLESQSLHAPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSWHPNYFTALHVQNWLSSSFTPP

Query:  PSPTVMGAPPPPPAGLYAM-----SQEVRRQAGV-------QGDEDVSGRSLGLDLQLSLGPGKP
        P P++    PP  AGL+AM     SQ+V RQAGV        GDE V GR LGLDLQLSLGP KP
Subjt:  PSPTVMGAPPPPPAGLYAM-----SQEVRRQAGV-------QGDEDVSGRSLGLDLQLSLGPGKP

A0A6J1JW51 zinc finger protein 6-like2.2e-4767.27Show/hide
Query:  MPKSQLKLFGFNISKENKKVSNFIEPPAVEWLESQSLHAPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSWHPNYFTALHVQNWLSSSFTPP
        M  SQLKLFGFNIS+ +  VSNF EPP  E  ES+  HAPKFECQYCCR FSNSQALGGHQNAHREER+LLKRAQ+KS H NYFT LHV+NWLSSSF P 
Subjt:  MPKSQLKLFGFNISKENKKVSNFIEPPAVEWLESQSLHAPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSWHPNYFTALHVQNWLSSSFTPP

Query:  PSPTVMGAPPPPPAGLYAM-----SQEVRRQAGV-------QGDEDVSGRSLGLDLQLSLGPGKP
        P  T     P   AGL+AM     SQ+V RQAGV        GDE V GR LGLDLQLSLGP KP
Subjt:  PSPTVMGAPPPPPAGLYAM-----SQEVRRQAGV-------QGDEDVSGRSLGLDLQLSLGPGKP

SwissProt top hitse value%identityAlignment
P93751 Zinc finger protein 82.8e-0749.12Show/hide
Query:  KFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSW--HPNYFTALHVQNWLSS
        +FEC YC R F  SQALGGHQNAH+ ERQ  KR  M S+  H       H+  +L++
Subjt:  KFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSW--HPNYFTALHVQNWLSS

Q39264 Zinc finger protein 54.4e-0839.77Show/hide
Query:  LKLFGFNISKENKKVSNFIEPPAVEWLESQSLHAPK-FECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSWHPN--YFTALHVQ
        +KLFGF +   ++               + SL   K  ECQYC +EF+NSQALGGHQNAH++ER   KR Q+++   +  Y+   H Q
Subjt:  LKLFGFNISKENKKVSNFIEPPAVEWLESQSLHAPK-FECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSWHPN--YFTALHVQ

Q39265 Zinc finger protein 62.0e-1648.21Show/hide
Query:  SQLKLFGFNISKENKKVSNFIEPPAVEWLESQSLHAPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSWH--PNYFTALHVQNWLSSSFTPPP
        S LKLFG N+ +     +   EP       S+S    K+ECQYCCREF+NSQALGGHQNAH++ERQLLKRAQM +    P +       N L S+F   P
Subjt:  SQLKLFGFNISKENKKVSNFIEPPAVEWLESQSLHAPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSWH--PNYFTALHVQNWLSSSFTPPP

Query:  SPTVMGAPPPPP
         P ++  P PPP
Subjt:  SPTVMGAPPPPP

Q84WI0 Zinc finger protein GIS4.4e-0843.37Show/hide
Query:  HAPKFECQYCCREFSNSQALGGHQNAHREERQLLKR-AQMKSWHP--NYFTALHVQNWLSSSFTPPPSPTVMGAPPPPPAGLY
        H  +FEC YC R F  SQALGGHQNAH+ ERQL KR      +HP  N ++  H  +W +   T   S     +  P P+G Y
Subjt:  HAPKFECQYCCREFSNSQALGGHQNAHREERQLLKR-AQMKSWHP--NYFTALHVQNWLSSSFTPPPSPTVMGAPPPPPAGLY

Q9C9H1 Zinc finger protein GIS31.0e-1251.22Show/hide
Query:  KFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSWH---PNYFTA----LHVQNWLSSSFTPPPSPTVMGAPPPPPAG
        K+ECQYCCREF NSQALGGHQNAH++ERQ LKRAQ+++      N+  A      ++N + S+F PPP      A P P  G
Subjt:  KFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSWH---PNYFTA----LHVQNWLSSSFTPPPSPTVMGAPPPPPAG

Arabidopsis top hitse value%identityAlignment
AT1G10480.1 zinc finger protein 53.1e-0939.77Show/hide
Query:  LKLFGFNISKENKKVSNFIEPPAVEWLESQSLHAPK-FECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSWHPN--YFTALHVQ
        +KLFGF +   ++               + SL   K  ECQYC +EF+NSQALGGHQNAH++ER   KR Q+++   +  Y+   H Q
Subjt:  LKLFGFNISKENKKVSNFIEPPAVEWLESQSLHAPK-FECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSWHPN--YFTALHVQ

AT1G67030.1 zinc finger protein 61.4e-1748.21Show/hide
Query:  SQLKLFGFNISKENKKVSNFIEPPAVEWLESQSLHAPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSWH--PNYFTALHVQNWLSSSFTPPP
        S LKLFG N+ +     +   EP       S+S    K+ECQYCCREF+NSQALGGHQNAH++ERQLLKRAQM +    P +       N L S+F   P
Subjt:  SQLKLFGFNISKENKKVSNFIEPPAVEWLESQSLHAPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSWH--PNYFTALHVQNWLSSSFTPPP

Query:  SPTVMGAPPPPP
         P ++  P PPP
Subjt:  SPTVMGAPPPPP

AT1G68360.1 C2H2 and C2HC zinc fingers superfamily protein7.1e-1451.22Show/hide
Query:  KFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSWH---PNYFTA----LHVQNWLSSSFTPPPSPTVMGAPPPPPAG
        K+ECQYCCREF NSQALGGHQNAH++ERQ LKRAQ+++      N+  A      ++N + S+F PPP      A P P  G
Subjt:  KFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSWH---PNYFTA----LHVQNWLSSSFTPPPSPTVMGAPPPPPAG

AT2G41940.1 zinc finger protein 82.0e-0849.12Show/hide
Query:  KFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSW--HPNYFTALHVQNWLSS
        +FEC YC R F  SQALGGHQNAH+ ERQ  KR  M S+  H       H+  +L++
Subjt:  KFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSW--HPNYFTALHVQNWLSS

AT3G58070.1 C2H2 and C2HC zinc fingers superfamily protein3.1e-0943.37Show/hide
Query:  HAPKFECQYCCREFSNSQALGGHQNAHREERQLLKR-AQMKSWHP--NYFTALHVQNWLSSSFTPPPSPTVMGAPPPPPAGLY
        H  +FEC YC R F  SQALGGHQNAH+ ERQL KR      +HP  N ++  H  +W +   T   S     +  P P+G Y
Subjt:  HAPKFECQYCCREFSNSQALGGHQNAHREERQLLKR-AQMKSWHP--NYFTALHVQNWLSSSFTPPPSPTVMGAPPPPPAGLY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTAAGTCTCAGCTGAAGCTTTTTGGCTTCAACATCTCAAAAGAGAATAAAAAAGTTTCAAATTTTATAGAGCCGCCGGCGGTGGAGTGGCTGGAATCTCAAAGTCT
TCATGCCCCAAAGTTCGAGTGCCAATATTGTTGCAGAGAATTTTCCAATTCGCAAGCTTTGGGCGGCCATCAAAACGCCCACAGAGAAGAAAGACAGCTTTTGAAGAGGG
CTCAAATGAAATCTTGGCATCCTAATTACTTCACAGCTCTGCACGTGCAGAACTGGCTGTCGTCGTCGTTTACGCCGCCGCCGTCTCCGACGGTGATGGGCGCTCCTCCA
CCGCCGCCGGCGGGGCTCTACGCTATGTCTCAAGAGGTGCGGCGGCAGGCCGGAGTTCAAGGAGATGAAGATGTTTCCGGTAGGAGTTTGGGCCTGGATTTACAGCTTAG
CCTTGGGCCTGGTAAGCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTAAGTCTCAGCTGAAGCTTTTTGGCTTCAACATCTCAAAAGAGAATAAAAAAGTTTCAAATTTTATAGAGCCGCCGGCGGTGGAGTGGCTGGAATCTCAAAGTCT
TCATGCCCCAAAGTTCGAGTGCCAATATTGTTGCAGAGAATTTTCCAATTCGCAAGCTTTGGGCGGCCATCAAAACGCCCACAGAGAAGAAAGACAGCTTTTGAAGAGGG
CTCAAATGAAATCTTGGCATCCTAATTACTTCACAGCTCTGCACGTGCAGAACTGGCTGTCGTCGTCGTTTACGCCGCCGCCGTCTCCGACGGTGATGGGCGCTCCTCCA
CCGCCGCCGGCGGGGCTCTACGCTATGTCTCAAGAGGTGCGGCGGCAGGCCGGAGTTCAAGGAGATGAAGATGTTTCCGGTAGGAGTTTGGGCCTGGATTTACAGCTTAG
CCTTGGGCCTGGTAAGCCTTGA
Protein sequenceShow/hide protein sequence
MPKSQLKLFGFNISKENKKVSNFIEPPAVEWLESQSLHAPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSWHPNYFTALHVQNWLSSSFTPPPSPTVMGAPP
PPPAGLYAMSQEVRRQAGVQGDEDVSGRSLGLDLQLSLGPGKP