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CcUC11G217080 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC11G217080
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionRING-type domain-containing protein
Genome locationCicolChr11:11866516..11867936
RNA-Seq ExpressionCcUC11G217080
SyntenyCcUC11G217080
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575644.1 hypothetical protein SDJN03_26283, partial [Cucurbita argyrosperma subsp. sororia]7.0e-3179.78Show/hide
Query:  MDIMENDNLNLQNNLSDFISEDENEVLRCLGTMRSDANFNGLHEEYSAAVGFHHSLFPNPPVSFHPNLASSFSDSISYTDIDWSFDSSQ
        MD +E DNLNL+N LS FIS+DENE  RCLGT+RSDANFNGLHEEYSAA GFHHS FP+P VS HPNLA SFSDSISYTDIDWSFD S+
Subjt:  MDIMENDNLNLQNNLSDFISEDENEVLRCLGTMRSDANFNGLHEEYSAAVGFHHSLFPNPPVSFHPNLASSFSDSISYTDIDWSFDSSQ
XP_023547723.1 uncharacterized protein LOC111806582 isoform X1 [Cucurbita pepo subsp. pepo]9.1e-3179.78Show/hide
Query:  MDIMENDNLNLQNNLSDFISEDENEVLRCLGTMRSDANFNGLHEEYSAAVGFHHSLFPNPPVSFHPNLASSFSDSISYTDIDWSFDSSQ
        MD ME DNLNL++ LS FIS+DENE  RCLGT+RSDANFNGLHEEYSAA GFHHS FP+P VS HPNLA SFSDSISYTDIDWSFD S+
Subjt:  MDIMENDNLNLQNNLSDFISEDENEVLRCLGTMRSDANFNGLHEEYSAAVGFHHSLFPNPPVSFHPNLASSFSDSISYTDIDWSFDSSQ
XP_023547724.1 uncharacterized protein LOC111806582 isoform X2 [Cucurbita pepo subsp. pepo]9.1e-3179.78Show/hide
Query:  MDIMENDNLNLQNNLSDFISEDENEVLRCLGTMRSDANFNGLHEEYSAAVGFHHSLFPNPPVSFHPNLASSFSDSISYTDIDWSFDSSQ
        MD ME DNLNL++ LS FIS+DENE  RCLGT+RSDANFNGLHEEYSAA GFHHS FP+P VS HPNLA SFSDSISYTDIDWSFD S+
Subjt:  MDIMENDNLNLQNNLSDFISEDENEVLRCLGTMRSDANFNGLHEEYSAAVGFHHSLFPNPPVSFHPNLASSFSDSISYTDIDWSFDSSQ
XP_023547725.1 uncharacterized protein LOC111806582 isoform X3 [Cucurbita pepo subsp. pepo]9.1e-3179.78Show/hide
Query:  MDIMENDNLNLQNNLSDFISEDENEVLRCLGTMRSDANFNGLHEEYSAAVGFHHSLFPNPPVSFHPNLASSFSDSISYTDIDWSFDSSQ
        MD ME DNLNL++ LS FIS+DENE  RCLGT+RSDANFNGLHEEYSAA GFHHS FP+P VS HPNLA SFSDSISYTDIDWSFD S+
Subjt:  MDIMENDNLNLQNNLSDFISEDENEVLRCLGTMRSDANFNGLHEEYSAAVGFHHSLFPNPPVSFHPNLASSFSDSISYTDIDWSFDSSQ
XP_023547726.1 uncharacterized protein LOC111806582 isoform X4 [Cucurbita pepo subsp. pepo]9.1e-3179.78Show/hide
Query:  MDIMENDNLNLQNNLSDFISEDENEVLRCLGTMRSDANFNGLHEEYSAAVGFHHSLFPNPPVSFHPNLASSFSDSISYTDIDWSFDSSQ
        MD ME DNLNL++ LS FIS+DENE  RCLGT+RSDANFNGLHEEYSAA GFHHS FP+P VS HPNLA SFSDSISYTDIDWSFD S+
Subjt:  MDIMENDNLNLQNNLSDFISEDENEVLRCLGTMRSDANFNGLHEEYSAAVGFHHSLFPNPPVSFHPNLASSFSDSISYTDIDWSFDSSQ
TrEMBL top hitse value%identityAlignment
A0A6J1JN28 uncharacterized protein LOC111488380 isoform X25.8e-3179.78Show/hide
Query:  MDIMENDNLNLQNNLSDFISEDENEVLRCLGTMRSDANFNGLHEEYSAAVGFHHSLFPNPPVSFHPNLASSFSDSISYTDIDWSFDSSQ
        MD ME DNLNL+N LS FIS+DENE  RCLGT+RSDANFNGLHEEYSAA G HHS FP+P VS HPNLA SFSDSISYTDIDWSFD S+
Subjt:  MDIMENDNLNLQNNLSDFISEDENEVLRCLGTMRSDANFNGLHEEYSAAVGFHHSLFPNPPVSFHPNLASSFSDSISYTDIDWSFDSSQ
A0A6J1JU43 uncharacterized protein LOC111488380 isoform X15.8e-3179.78Show/hide
Query:  MDIMENDNLNLQNNLSDFISEDENEVLRCLGTMRSDANFNGLHEEYSAAVGFHHSLFPNPPVSFHPNLASSFSDSISYTDIDWSFDSSQ
        MD ME DNLNL+N LS FIS+DENE  RCLGT+RSDANFNGLHEEYSAA G HHS FP+P VS HPNLA SFSDSISYTDIDWSFD S+
Subjt:  MDIMENDNLNLQNNLSDFISEDENEVLRCLGTMRSDANFNGLHEEYSAAVGFHHSLFPNPPVSFHPNLASSFSDSISYTDIDWSFDSSQ
A0A6J1JU48 uncharacterized protein LOC111488380 isoform X55.8e-3179.78Show/hide
Query:  MDIMENDNLNLQNNLSDFISEDENEVLRCLGTMRSDANFNGLHEEYSAAVGFHHSLFPNPPVSFHPNLASSFSDSISYTDIDWSFDSSQ
        MD ME DNLNL+N LS FIS+DENE  RCLGT+RSDANFNGLHEEYSAA G HHS FP+P VS HPNLA SFSDSISYTDIDWSFD S+
Subjt:  MDIMENDNLNLQNNLSDFISEDENEVLRCLGTMRSDANFNGLHEEYSAAVGFHHSLFPNPPVSFHPNLASSFSDSISYTDIDWSFDSSQ
A0A6J1JW07 uncharacterized protein LOC111488380 isoform X45.8e-3179.78Show/hide
Query:  MDIMENDNLNLQNNLSDFISEDENEVLRCLGTMRSDANFNGLHEEYSAAVGFHHSLFPNPPVSFHPNLASSFSDSISYTDIDWSFDSSQ
        MD ME DNLNL+N LS FIS+DENE  RCLGT+RSDANFNGLHEEYSAA G HHS FP+P VS HPNLA SFSDSISYTDIDWSFD S+
Subjt:  MDIMENDNLNLQNNLSDFISEDENEVLRCLGTMRSDANFNGLHEEYSAAVGFHHSLFPNPPVSFHPNLASSFSDSISYTDIDWSFDSSQ
A0A6J1JXH5 uncharacterized protein LOC111488380 isoform X35.8e-3179.78Show/hide
Query:  MDIMENDNLNLQNNLSDFISEDENEVLRCLGTMRSDANFNGLHEEYSAAVGFHHSLFPNPPVSFHPNLASSFSDSISYTDIDWSFDSSQ
        MD ME DNLNL+N LS FIS+DENE  RCLGT+RSDANFNGLHEEYSAA G HHS FP+P VS HPNLA SFSDSISYTDIDWSFD S+
Subjt:  MDIMENDNLNLQNNLSDFISEDENEVLRCLGTMRSDANFNGLHEEYSAAVGFHHSLFPNPPVSFHPNLASSFSDSISYTDIDWSFDSSQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACATTATGGAAAATGACAATCTGAACCTGCAAAACAATCTGTCTGATTTTATTTCTGAGGATGAAAATGAAGTGTTGAGATGCCTTGGTACAATGAGAAGTGATGC
TAACTTCAATGGACTCCATGAAGAATACAGTGCAGCTGTTGGATTCCATCATTCCCTATTTCCAAATCCACCAGTCTCCTTTCATCCAAATTTGGCTAGTTCCTTCTCTG
ATTCAATTTCATATACTGATATTGATTGGTCATTTGATAGCTCCCAATCTCCTAAACTTACAAACAAAAACTTTTGTTCTAAGAATGATGTATGA
mRNA sequenceShow/hide mRNA sequence
AGATTATTTCACACAATCCCTAAACCCACGCCACCTATCCCTCTCGCAAGAAGTCGCCGCCCATTCCTAAACCCACGCTGCTCGTCCCCCAACGGTGATCGGAAATCTCG
CTTCGGCCATCGTTCTCCGCTAAAATTCATCACTCTCTTTCTCATGGACATTATGGAAAATGACAATCTGAACCTGCAAAACAATCTGTCTGATTTTATTTCTGAGGATG
AAAATGAAGTGTTGAGATGCCTTGGTACAATGAGAAGTGATGCTAACTTCAATGGACTCCATGAAGAATACAGTGCAGCTGTTGGATTCCATCATTCCCTATTTCCAAAT
CCACCAGTCTCCTTTCATCCAAATTTGGCTAGTTCCTTCTCTGATTCAATTTCATATACTGATATTGATTGGTCATTTGATAGCTCCCAATCTCCTAAACTTACAAACAA
AAACTTTTGTTCTAAGAATGATGTATGAGAAGGATGCTTAGACTTGCATGAATGTTGTGATTATTGTTGTCATCGACTCATTGAGAGTCAAATAATTATAAATAATATTA
GAACGTGT
Protein sequenceShow/hide protein sequence
MDIMENDNLNLQNNLSDFISEDENEVLRCLGTMRSDANFNGLHEEYSAAVGFHHSLFPNPPVSFHPNLASSFSDSISYTDIDWSFDSSQSPKLTNKNFCSKNDV