; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC11G217550 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC11G217550
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionLate embryogenesis abundant protein family protein, putative
Genome locationCicolChr11:14935104..14937888
RNA-Seq ExpressionCcUC11G217550
SyntenyCcUC11G217550
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598970.1 hypothetical protein SDJN03_08748, partial [Cucurbita argyrosperma subsp. sororia]4.5e-4774.68Show/hide
Query:  MASSTLFKSLPKF----VAAITKRSTTSNPTLILASNPKSIHTRSPQDGSEAKDAINPGANEGMMPGENMMKDKAYSTAEHVSEKTMDMAGMVSAKAHEV
        M S TLFKSLPKF      AI +RS TSN +L+ ASNPKSIHT  PQDGSEAKDAINP ANEGM PGE+MM+DKAYSTAEHVSEKT DMAGM+SA+A EV
Subjt:  MASSTLFKSLPKF----VAAITKRSTTSNPTLILASNPKSIHTRSPQDGSEAKDAINPGANEGMMPGENMMKDKAYSTAEHVSEKTMDMAGMVSAKAHEV

Query:  SAKAKQAIEAAWDSAKDTAQRAKDTLVDTAKDSKEFVKANAKSVEKSMNTKNRS
        SAKAK+A+EA    AKD+A RAKDT+V+T KDSK+FVKANAK+VEK MNTKNRS
Subjt:  SAKAKQAIEAAWDSAKDTAQRAKDTLVDTAKDSKEFVKANAKSVEKSMNTKNRS

XP_022933143.1 uncharacterized protein At4g13230 [Cucurbita moschata]4.5e-4774.68Show/hide
Query:  MASSTLFKSLPKF----VAAITKRSTTSNPTLILASNPKSIHTRSPQDGSEAKDAINPGANEGMMPGENMMKDKAYSTAEHVSEKTMDMAGMVSAKAHEV
        M SSTLFKSLPKF      AI +RS TSN +L+ ASNPK IHT  PQDGSEAKDAINP ANEGM PGE+MM+DKAYSTAEHVSEKT DMAGM+SA+A EV
Subjt:  MASSTLFKSLPKF----VAAITKRSTTSNPTLILASNPKSIHTRSPQDGSEAKDAINPGANEGMMPGENMMKDKAYSTAEHVSEKTMDMAGMVSAKAHEV

Query:  SAKAKQAIEAAWDSAKDTAQRAKDTLVDTAKDSKEFVKANAKSVEKSMNTKNRS
        SAKAK+A+EA    AKD+A RAKDT+V+T KDSK+FVKANAK+VEK MNTKNRS
Subjt:  SAKAKQAIEAAWDSAKDTAQRAKDTLVDTAKDSKEFVKANAKSVEKSMNTKNRS

XP_022973925.1 uncharacterized protein At4g13230 [Cucurbita maxima]7.2e-4574.03Show/hide
Query:  MASSTLFKSLPKF----VAAITKRSTTSNPTLILASNPKSIHTRSPQDGSEAKDAINPGANEGMMPGENMMKDKAYSTAEHVSEKTMDMAGMVSAKAHEV
        M SSTLFKSLPKF     A I  RS TSN +L  ASNPK IHT  PQDGSEAKDAINP ANEGM  GE MM+DKAYSTAEHVSEKT DMAGM+SA+A EV
Subjt:  MASSTLFKSLPKF----VAAITKRSTTSNPTLILASNPKSIHTRSPQDGSEAKDAINPGANEGMMPGENMMKDKAYSTAEHVSEKTMDMAGMVSAKAHEV

Query:  SAKAKQAIEAAWDSAKDTAQRAKDTLVDTAKDSKEFVKANAKSVEKSMNTKNRS
        SAKAKQA+EA    AKD+A RAKD++V+T KDSK+FVKANAK+VEK MNTKNRS
Subjt:  SAKAKQAIEAAWDSAKDTAQRAKDTLVDTAKDSKEFVKANAKSVEKSMNTKNRS

XP_023546410.1 uncharacterized protein At4g13230 [Cucurbita pepo subsp. pepo]2.2e-4674.03Show/hide
Query:  MASSTLFKSLPKF----VAAITKRSTTSNPTLILASNPKSIHTRSPQDGSEAKDAINPGANEGMMPGENMMKDKAYSTAEHVSEKTMDMAGMVSAKAHEV
        M SSTLFKSLPKF      AI +RS TSN +L+ ASNPKSIHT  PQDG EAKDAI P ANEGM PGE+MM+DKAYSTAEHVSEKT DMAGM+SA+A EV
Subjt:  MASSTLFKSLPKF----VAAITKRSTTSNPTLILASNPKSIHTRSPQDGSEAKDAINPGANEGMMPGENMMKDKAYSTAEHVSEKTMDMAGMVSAKAHEV

Query:  SAKAKQAIEAAWDSAKDTAQRAKDTLVDTAKDSKEFVKANAKSVEKSMNTKNRS
        SAKAK+A+EA    AKD+A RAKDT+V+T KDSK+FVKANAK+VEK MNTKNRS
Subjt:  SAKAKQAIEAAWDSAKDTAQRAKDTLVDTAKDSKEFVKANAKSVEKSMNTKNRS

XP_038889268.1 uncharacterized protein At4g13230-like [Benincasa hispida]5.1e-5988.24Show/hide
Query:  MASSTLFKSLPK---FVAAITKRSTTSNPTLILASNPKSIHTRSPQDGSEAKDAINPGANEGMMPGENMMKDKAYSTAEHVSEKTMDMAGMVSAKAHEVS
        MASSTLFK+LPK   F AAIT+RSTTSN TLILASNPK IHT   QDGSEAKDAINPGANEGMMPGENMMKDKAYSTAEHVSEKT DMAGMVSAKAH VS
Subjt:  MASSTLFKSLPK---FVAAITKRSTTSNPTLILASNPKSIHTRSPQDGSEAKDAINPGANEGMMPGENMMKDKAYSTAEHVSEKTMDMAGMVSAKAHEVS

Query:  AKAKQAIEAAWDSAKDTAQRAKDTLVDTAKDSKEFVKANAKSVEKSMNTKNRS
        AKAKQA+EAAWDSAKDTAQRAKDTLVDTA DSK+FVKAN KSVEKSMNTKN S
Subjt:  AKAKQAIEAAWDSAKDTAQRAKDTLVDTAKDSKEFVKANAKSVEKSMNTKNRS

TrEMBL top hitse value%identityAlignment
A0A2N9J2L7 Uncharacterized protein1.8e-2552.32Show/hide
Query:  MASSTLFKSLPKF--VAAITKRSTTSNPTLILASNPKSIHTRS-PQDGSEAKDAINPGANEGMMPGENMMKDKAYSTAEHVSEKTMDMAGMVSAKAHEVS
        MAS +L   LPKF    A   R  T NP L +ASNP+ I   S P+  S A DA+  GAN+    G+  +K+KA+STAEHV++KT DMAGM+SA A +V+
Subjt:  MASSTLFKSLPKF--VAAITKRSTTSNPTLILASNPKSIHTRS-PQDGSEAKDAINPGANEGMMPGENMMKDKAYSTAEHVSEKTMDMAGMVSAKAHEVS

Query:  AKAKQAIEAAWDSAKDTAQRAKDTLVDTAKDSKEFVKANAKSVEKSMNTKN
         KAKQ  + AW +AKDTAQ+AKDT++  A++SKE +K NA++V++SMNTKN
Subjt:  AKAKQAIEAAWDSAKDTAQRAKDTLVDTAKDSKEFVKANAKSVEKSMNTKN

A0A6J1CSM2 uncharacterized protein At4g13230-like1.2e-3766.24Show/hide
Query:  MASSTLFKSLPKFV---AAITKRSTTSNPTLILASNPKSIHTRSPQD-----GSEAKDAINPGANEGMMPGENMMKDKAYSTAEHVSEKTMDMAGMVSAK
        MAS TL K+LPKF    AAI +RST SNP L+L SNPK +HT SPQD       EAKDAINPGANE MMPGE+MM + AYSTA+HV EK  DM GMV + 
Subjt:  MASSTLFKSLPKFV---AAITKRSTTSNPTLILASNPKSIHTRSPQD-----GSEAKDAINPGANEGMMPGENMMKDKAYSTAEHVSEKTMDMAGMVSAK

Query:  AHEVSAKAKQAIEAAWDSAKDTAQRAKDTLVDTAKDSKEFVKANAKSVEKSMNTKNR
          E+S KAKQ +EAAWDS    AQRAKDT+V+  K+SKEFVKANA+SV+KSMNTKNR
Subjt:  AHEVSAKAKQAIEAAWDSAKDTAQRAKDTLVDTAKDSKEFVKANAKSVEKSMNTKNR

A0A6J1F3W7 uncharacterized protein At4g132302.2e-4774.68Show/hide
Query:  MASSTLFKSLPKF----VAAITKRSTTSNPTLILASNPKSIHTRSPQDGSEAKDAINPGANEGMMPGENMMKDKAYSTAEHVSEKTMDMAGMVSAKAHEV
        M SSTLFKSLPKF      AI +RS TSN +L+ ASNPK IHT  PQDGSEAKDAINP ANEGM PGE+MM+DKAYSTAEHVSEKT DMAGM+SA+A EV
Subjt:  MASSTLFKSLPKF----VAAITKRSTTSNPTLILASNPKSIHTRSPQDGSEAKDAINPGANEGMMPGENMMKDKAYSTAEHVSEKTMDMAGMVSAKAHEV

Query:  SAKAKQAIEAAWDSAKDTAQRAKDTLVDTAKDSKEFVKANAKSVEKSMNTKNRS
        SAKAK+A+EA    AKD+A RAKDT+V+T KDSK+FVKANAK+VEK MNTKNRS
Subjt:  SAKAKQAIEAAWDSAKDTAQRAKDTLVDTAKDSKEFVKANAKSVEKSMNTKNRS

A0A6J1ICL4 uncharacterized protein At4g132303.5e-4574.03Show/hide
Query:  MASSTLFKSLPKF----VAAITKRSTTSNPTLILASNPKSIHTRSPQDGSEAKDAINPGANEGMMPGENMMKDKAYSTAEHVSEKTMDMAGMVSAKAHEV
        M SSTLFKSLPKF     A I  RS TSN +L  ASNPK IHT  PQDGSEAKDAINP ANEGM  GE MM+DKAYSTAEHVSEKT DMAGM+SA+A EV
Subjt:  MASSTLFKSLPKF----VAAITKRSTTSNPTLILASNPKSIHTRSPQDGSEAKDAINPGANEGMMPGENMMKDKAYSTAEHVSEKTMDMAGMVSAKAHEV

Query:  SAKAKQAIEAAWDSAKDTAQRAKDTLVDTAKDSKEFVKANAKSVEKSMNTKNRS
        SAKAKQA+EA    AKD+A RAKD++V+T KDSK+FVKANAK+VEK MNTKNRS
Subjt:  SAKAKQAIEAAWDSAKDTAQRAKDTLVDTAKDSKEFVKANAKSVEKSMNTKNRS

A0A7N2KQQ7 Uncharacterized protein2.9e-2352.63Show/hide
Query:  MASSTLFKSLPKF---VAAITKRSTTSNPTLILASNPKSIHTRS-PQDGSEAKDAINPGANEGMMPGENMMKDKAYSTAEHVSEKTMDMAGMVSAKAHEV
        MAS TL  SLPKF    +AI +RST  NP L  A  P+ I   S P+  S A DA+  GANE    GE  +KDKA STAEHVS+ T DMAG +SA A +V
Subjt:  MASSTLFKSLPKF---VAAITKRSTTSNPTLILASNPKSIHTRS-PQDGSEAKDAINPGANEGMMPGENMMKDKAYSTAEHVSEKTMDMAGMVSAKAHEV

Query:  SAKAKQAIEAAWDSAKDTAQRAKDTLVDTAKDSKEFVKANAKSVEKSMNTKN
        + K KQ  + AW SAKDTAQ+AKD ++   ++SKE +K +A++V+ SMNTKN
Subjt:  SAKAKQAIEAAWDSAKDTAQRAKDTLVDTAKDSKEFVKANAKSVEKSMNTKN

SwissProt top hitse value%identityAlignment
Q8LFD5 Uncharacterized protein At4g132302.5e-0843.75Show/hide
Query:  DKAYSTAEHVSEKTMDMAGMVSAKAHEVSAKAKQAIEAAWDSAKDTAQRAKDTLVDTAKDSKEFVKANAKSVEKSMNTKN
        DKA    + V++K  + A  +S  A  +  KAK   E AWD  KDT ++ KDT+    +++KE +KA AK+VE+SMNTKN
Subjt:  DKAYSTAEHVSEKTMDMAGMVSAKAHEVSAKAKQAIEAAWDSAKDTAQRAKDTLVDTAKDSKEFVKANAKSVEKSMNTKN

Arabidopsis top hitse value%identityAlignment
AT4G13230.1 Late embryogenesis abundant protein (LEA) family protein1.8e-0943.75Show/hide
Query:  DKAYSTAEHVSEKTMDMAGMVSAKAHEVSAKAKQAIEAAWDSAKDTAQRAKDTLVDTAKDSKEFVKANAKSVEKSMNTKN
        DKA    + V++K  + A  +S  A  +  KAK   E AWD  KDT ++ KDT+    +++KE +KA AK+VE+SMNTKN
Subjt:  DKAYSTAEHVSEKTMDMAGMVSAKAHEVSAKAKQAIEAAWDSAKDTAQRAKDTLVDTAKDSKEFVKANAKSVEKSMNTKN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGCTCCACCCTCTTCAAAAGCCTTCCAAAGTTTGTTGCTGCAATTACAAAAAGATCAACAACCTCCAACCCTACTCTCATTTTGGCTTCTAACCCTAAA
TCTATTCATACAAGATCACCACAAGATGGGTCAGAAGCCAAAGATGCCATAAACCCAGGAGCAAATGAAGGAATGATGCCTGGTGAAAATATGATGAAAGATAAG
GCTTACTCCACTGCAGAACATGTGAGTGAAAAGACAATGGATATGGCAGGAATGGTAAGTGCAAAAGCACATGAGGTTTCAGCAAAGGCAAAGCAAGCAATTGAA
GCAGCATGGGACTCAGCAAAGGACACAGCCCAAAGGGCAAAAGACACGTTGGTTGACACTGCCAAAGACTCCAAGGAATTTGTCAAAGCAAATGCTAAGTCTGTT
GAGAAGAGCATGAACACCAAGAACCGTTCTTAA
mRNA sequenceShow/hide mRNA sequence
TGCCACTCTTCTAATTCTCCATACTCCTTCAAATTTCTCTTCTCATATATATATACTTTTTTTAAAGTAAAAAGTAAGAAAAATGGCAAGCTCCACCCTCTTCAA
AAGCCTTCCAAAGTTTGTTGCTGCAATTACAAAAAGATCAACAACCTCCAACCCTACTCTCATTTTGGCTTCTAACCCTAAATCTATTCATACAAGATCACCACA
AGATGGGTCAGAAGCCAAAGATGCCATAAACCCAGGAGCAAATGAAGGAATGATGCCTGGTGAAAATATGATGAAAGATAAGGCTTACTCCACTGCAGAACATGT
GAGTGAAAAGACAATGGATATGGCAGGAATGGTAAGTGCAAAAGCACATGAGGTTTCAGCAAAGGCAAAGCAAGCAATTGAAGCAGCATGGGACTCAGCAAAGGA
CACAGCCCAAAGGGCAAAAGACACGTTGGTTGACACTGCCAAAGACTCCAAGGAATTTGTCAAAGCAAATGCTAAGTCTGTTGAGAAGAGCATGAACACCAAGAA
CCGTTCTTAAATCCCATTAACCCTCTTCTCAAACTTAGCCTTTTCTTTTTAACTCTTCCTTCCAATAAAGCTTCGGATTGTATTGTAAAATTATCGATCAATCCA
AAAGCTTAAGTTAGATTGCGGTAATTAATGTTATGACGTTGTCCTTTATTTTTTGAAATCCACATTAATTGAGGAAGAAAATTATATTACAATGCTTTGGACGGA
GAATCTCTTACTTGGTACCATGTAAGATCATCATCAATCAACCTAAAAACTTATAATGATGACTTATAATGATGATAGGTTACAATAACTTAGTTATATCGATAT
GATGACATTCACCCGTATTATTATATATGTATATTTGTGTGAAAGATGGGTTCACACTAAAAGGCAATAATGAG
Protein sequenceShow/hide protein sequence
MASSTLFKSLPKFVAAITKRSTTSNPTLILASNPKSIHTRSPQDGSEAKDAINPGANEGMMPGENMMKDKAYSTAEHVSEKTMDMAGMVSAKAHEVSAKAKQAIE
AAWDSAKDTAQRAKDTLVDTAKDSKEFVKANAKSVEKSMNTKNRS