; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC11G217670 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC11G217670
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionJHL23J11.5 protein
Genome locationCicolChr11:15850679..15851233
RNA-Seq ExpressionCcUC11G217670
SyntenyCcUC11G217670
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051315.1 uncharacterized protein E6C27_scaffold55G00280 [Cucumis melo var. makuwa]3.9e-9395.65Show/hide
Query:  MGLSPSSSTSVCKSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAFTIAGAVSGCAMASAATGRWFGVHMVFTVLTAIFQGSITVL
        MGLSPSSSTSV +SHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAFTIAGAVSGCAMASA+TGRWFGVHMVFTVLTAIFQGS+TVL
Subjt:  MGLSPSSSTSVCKSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAFTIAGAVSGCAMASAATGRWFGVHMVFTVLTAIFQGSITVL

Query:  VFTRTGDFLGELKSYVREEDGSVILKLGGGLSGLIFCLEWIVLVLAFCLKYYLYVEGNGSGEGLKRSAKVQQFEDSAWAAPFPV
        VFTRTGDFLGELKSYVREEDGSVILKLGGGLSGLIFCLEW+VLVLAFCLKYY+YVEGNG+GEGLKRSAKVQQFEDS WAAPFPV
Subjt:  VFTRTGDFLGELKSYVREEDGSVILKLGGGLSGLIFCLEWIVLVLAFCLKYYLYVEGNGSGEGLKRSAKVQQFEDSAWAAPFPV

XP_004138889.1 uncharacterized protein LOC101217347 [Cucumis sativus]9.6e-9294.02Show/hide
Query:  MGLSPSSSTSVCKSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAFTIAGAVSGCAMASAATGRWFGVHMVFTVLTAIFQGSITVL
        MGLSPSSSTS+  SHYNIHKLFLLCNYILLGAASSCIFLTLSLRL+PSVCGFFIIFLHAFTIAGAVSGCAMASA+TGRWFGVHMVFTVLTAIFQGS+TVL
Subjt:  MGLSPSSSTSVCKSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAFTIAGAVSGCAMASAATGRWFGVHMVFTVLTAIFQGSITVL

Query:  VFTRTGDFLGELKSYVREEDGSVILKLGGGLSGLIFCLEWIVLVLAFCLKYYLYVEGNGSGEGLKRSAKVQQFEDSAWAAPFPV
        VFTRT DFLGELKSYVREEDGSVILKLGGGLSGLIFCLEW+VLVLAFCLKYY+YVEGNG+GEGLKRSAKVQQFEDS WAAPFPV
Subjt:  VFTRTGDFLGELKSYVREEDGSVILKLGGGLSGLIFCLEWIVLVLAFCLKYYLYVEGNGSGEGLKRSAKVQQFEDSAWAAPFPV

XP_008441816.1 PREDICTED: uncharacterized protein LOC103485869 [Cucumis melo]9.6e-9295.14Show/hide
Query:  MGLSPSSSTSVCKSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAFTIAGAVSGCAMASAATGRWFGVHMVFTVLTAIFQGSITVL
        MGLSPSSSTSV +SHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAFTIAGAVSGCAMASA+TGRWFGVHMVFTVLTAIFQGS+TVL
Subjt:  MGLSPSSSTSVCKSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAFTIAGAVSGCAMASAATGRWFGVHMVFTVLTAIFQGSITVL

Query:  VFTRTGDFLGELKSYVREEDGSVILKLGGGLSGLIFCLEWIVLVLAFCLKYYLYVEGN-GSGEGLKRSAKVQQFEDSAWAAPFPV
        VFTRTGDFLGELKSYVREEDGSVILKLGGGLSGLIFCLEW+VLVLAFCLKYY+YVEGN G+GEGLKRSAKVQQFEDS WAAPFPV
Subjt:  VFTRTGDFLGELKSYVREEDGSVILKLGGGLSGLIFCLEWIVLVLAFCLKYYLYVEGN-GSGEGLKRSAKVQQFEDSAWAAPFPV

XP_022996789.1 uncharacterized protein LOC111491920 [Cucurbita maxima]7.9e-8688.59Show/hide
Query:  MGLSPSSSTSVCKSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAFTIAGAVSGCAMASAATGRWFGVHMVFTVLTAIFQGSITVL
        MGLS SSSTS+ ++HYNIH LFLLCNY+LLGAASSCIFLTLSLRL+PSVCGFFIIFLHAFTIAGA+SGCAMASAATGRW+GVHMVFTVLTAIFQGS+TVL
Subjt:  MGLSPSSSTSVCKSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAFTIAGAVSGCAMASAATGRWFGVHMVFTVLTAIFQGSITVL

Query:  VFTRTGDFLGELKSYVREEDGSVILKLGGGLSGLIFCLEWIVLVLAFCLKYYLYVEGNGSGEGLKRSAKVQQFEDSAWAAPFPV
        V+TRT +FLGELKSYVREE G+VILKL GGLSGLIFCLEWIVLVLAFCLKYYLYVEGNGSGE LKRS KVQQFEDS WA PFPV
Subjt:  VFTRTGDFLGELKSYVREEDGSVILKLGGGLSGLIFCLEWIVLVLAFCLKYYLYVEGNGSGEGLKRSAKVQQFEDSAWAAPFPV

XP_038890643.1 uncharacterized protein LOC120080148 [Benincasa hispida]1.3e-9195.11Show/hide
Query:  MGLSPSSSTSVCKSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAFTIAGAVSGCAMASAATGRWFGVHMVFTVLTAIFQGSITVL
        MGLSPSSSTS+ +SHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAFTIAGAVSGCAMASAATGRWFGVHMVFTVLTAIFQGS+TVL
Subjt:  MGLSPSSSTSVCKSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAFTIAGAVSGCAMASAATGRWFGVHMVFTVLTAIFQGSITVL

Query:  VFTRTGDFLGELKSYVREEDGSVILKLGGGLSGLIFCLEWIVLVLAFCLKYYLYVEGNGSGEGLKRSAKVQQFEDSAWAAPFPV
        VFTRT DFLGELKSYVREEDGSVILKLGGGLSGLIFCLEWIVLVLAFCLKYY+YVEGNGS EGLKRS KVQQFEDS WAAPFPV
Subjt:  VFTRTGDFLGELKSYVREEDGSVILKLGGGLSGLIFCLEWIVLVLAFCLKYYLYVEGNGSGEGLKRSAKVQQFEDSAWAAPFPV

TrEMBL top hitse value%identityAlignment
A0A0A0LHB3 Uncharacterized protein4.7e-9294.02Show/hide
Query:  MGLSPSSSTSVCKSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAFTIAGAVSGCAMASAATGRWFGVHMVFTVLTAIFQGSITVL
        MGLSPSSSTS+  SHYNIHKLFLLCNYILLGAASSCIFLTLSLRL+PSVCGFFIIFLHAFTIAGAVSGCAMASA+TGRWFGVHMVFTVLTAIFQGS+TVL
Subjt:  MGLSPSSSTSVCKSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAFTIAGAVSGCAMASAATGRWFGVHMVFTVLTAIFQGSITVL

Query:  VFTRTGDFLGELKSYVREEDGSVILKLGGGLSGLIFCLEWIVLVLAFCLKYYLYVEGNGSGEGLKRSAKVQQFEDSAWAAPFPV
        VFTRT DFLGELKSYVREEDGSVILKLGGGLSGLIFCLEW+VLVLAFCLKYY+YVEGNG+GEGLKRSAKVQQFEDS WAAPFPV
Subjt:  VFTRTGDFLGELKSYVREEDGSVILKLGGGLSGLIFCLEWIVLVLAFCLKYYLYVEGNGSGEGLKRSAKVQQFEDSAWAAPFPV

A0A1S3B526 uncharacterized protein LOC1034858694.7e-9295.14Show/hide
Query:  MGLSPSSSTSVCKSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAFTIAGAVSGCAMASAATGRWFGVHMVFTVLTAIFQGSITVL
        MGLSPSSSTSV +SHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAFTIAGAVSGCAMASA+TGRWFGVHMVFTVLTAIFQGS+TVL
Subjt:  MGLSPSSSTSVCKSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAFTIAGAVSGCAMASAATGRWFGVHMVFTVLTAIFQGSITVL

Query:  VFTRTGDFLGELKSYVREEDGSVILKLGGGLSGLIFCLEWIVLVLAFCLKYYLYVEGN-GSGEGLKRSAKVQQFEDSAWAAPFPV
        VFTRTGDFLGELKSYVREEDGSVILKLGGGLSGLIFCLEW+VLVLAFCLKYY+YVEGN G+GEGLKRSAKVQQFEDS WAAPFPV
Subjt:  VFTRTGDFLGELKSYVREEDGSVILKLGGGLSGLIFCLEWIVLVLAFCLKYYLYVEGN-GSGEGLKRSAKVQQFEDSAWAAPFPV

A0A5A7UCF0 Uncharacterized protein1.9e-9395.65Show/hide
Query:  MGLSPSSSTSVCKSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAFTIAGAVSGCAMASAATGRWFGVHMVFTVLTAIFQGSITVL
        MGLSPSSSTSV +SHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAFTIAGAVSGCAMASA+TGRWFGVHMVFTVLTAIFQGS+TVL
Subjt:  MGLSPSSSTSVCKSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAFTIAGAVSGCAMASAATGRWFGVHMVFTVLTAIFQGSITVL

Query:  VFTRTGDFLGELKSYVREEDGSVILKLGGGLSGLIFCLEWIVLVLAFCLKYYLYVEGNGSGEGLKRSAKVQQFEDSAWAAPFPV
        VFTRTGDFLGELKSYVREEDGSVILKLGGGLSGLIFCLEW+VLVLAFCLKYY+YVEGNG+GEGLKRSAKVQQFEDS WAAPFPV
Subjt:  VFTRTGDFLGELKSYVREEDGSVILKLGGGLSGLIFCLEWIVLVLAFCLKYYLYVEGNGSGEGLKRSAKVQQFEDSAWAAPFPV

A0A5D3DJ66 Uncharacterized protein4.7e-9295.14Show/hide
Query:  MGLSPSSSTSVCKSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAFTIAGAVSGCAMASAATGRWFGVHMVFTVLTAIFQGSITVL
        MGLSPSSSTSV +SHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAFTIAGAVSGCAMASA+TGRWFGVHMVFTVLTAIFQGS+TVL
Subjt:  MGLSPSSSTSVCKSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAFTIAGAVSGCAMASAATGRWFGVHMVFTVLTAIFQGSITVL

Query:  VFTRTGDFLGELKSYVREEDGSVILKLGGGLSGLIFCLEWIVLVLAFCLKYYLYVEGN-GSGEGLKRSAKVQQFEDSAWAAPFPV
        VFTRTGDFLGELKSYVREEDGSVILKLGGGLSGLIFCLEW+VLVLAFCLKYY+YVEGN G+GEGLKRSAKVQQFEDS WAAPFPV
Subjt:  VFTRTGDFLGELKSYVREEDGSVILKLGGGLSGLIFCLEWIVLVLAFCLKYYLYVEGN-GSGEGLKRSAKVQQFEDSAWAAPFPV

A0A6J1K9N5 uncharacterized protein LOC1114919203.8e-8688.59Show/hide
Query:  MGLSPSSSTSVCKSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAFTIAGAVSGCAMASAATGRWFGVHMVFTVLTAIFQGSITVL
        MGLS SSSTS+ ++HYNIH LFLLCNY+LLGAASSCIFLTLSLRL+PSVCGFFIIFLHAFTIAGA+SGCAMASAATGRW+GVHMVFTVLTAIFQGS+TVL
Subjt:  MGLSPSSSTSVCKSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAFTIAGAVSGCAMASAATGRWFGVHMVFTVLTAIFQGSITVL

Query:  VFTRTGDFLGELKSYVREEDGSVILKLGGGLSGLIFCLEWIVLVLAFCLKYYLYVEGNGSGEGLKRSAKVQQFEDSAWAAPFPV
        V+TRT +FLGELKSYVREE G+VILKL GGLSGLIFCLEWIVLVLAFCLKYYLYVEGNGSGE LKRS KVQQFEDS WA PFPV
Subjt:  VFTRTGDFLGELKSYVREEDGSVILKLGGGLSGLIFCLEWIVLVLAFCLKYYLYVEGNGSGEGLKRSAKVQQFEDSAWAAPFPV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G02640.1 unknown protein1.0e-5964.29Show/hide
Query:  MGLSPSSSTSVCKSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAFTIAGAVSGCAMASAATGRWFGVHMVFTVLTAIFQGSITVL
        MGL P    S+ +SHY  HKLFL  NY+LLGA+SSCIFLTLSLRL+PS+CGFF+I LHA TIA AVSGCA AS    RW+  HM+ TVLTAIFQGS++VL
Subjt:  MGLSPSSSTSVCKSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAFTIAGAVSGCAMASAATGRWFGVHMVFTVLTAIFQGSITVL

Query:  VFTRTGDFLGELKSYVREEDGSVILKLGGGLSGLIFCLEWIVLVLAFCLKYYLYVEGNGSGEGLKRSAKVQQFE---DSAWA
        +FT T +FL  L SYVRE++ S+ILKL GGL  +IFCLEWIVLVLAF LKYY YV+G+ +G  +KR+ KVQ  E   +S WA
Subjt:  VFTRTGDFLGELKSYVREEDGSVILKLGGGLSGLIFCLEWIVLVLAFCLKYYLYVEGNGSGEGLKRSAKVQQFE---DSAWA

AT5G16250.1 unknown protein2.1e-6067.78Show/hide
Query:  SSSTSVCKSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAFTIAGAVSGCAMASAATGRWFGVHMVFTVLTAIFQGSITVLVFTRT
        SSS+ V +SHY+ HK+FL  NYILLGAASSCIFLTLSLRL+PS+CGF +I LHA TIA AVSGCA AS    RW+  HMV TVLTAIFQGS++VL+FT T
Subjt:  SSSTSVCKSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAFTIAGAVSGCAMASAATGRWFGVHMVFTVLTAIFQGSITVLVFTRT

Query:  GDFLGELKSYVREEDGSVILKLGGGLSGLIFCLEWIVLVLAFCLKYYLYVEGNGSGEGLKRSAKVQQFED-SAWAAPFPV
          FLG LKSYVREED +VILKLGGGL  +IFCL+WIVLV AF LKYY YV+G G G  +KR+ KVQ  E+   W  PF V
Subjt:  GDFLGELKSYVREEDGSVILKLGGGLSGLIFCLEWIVLVLAFCLKYYLYVEGNGSGEGLKRSAKVQQFED-SAWAAPFPV

AT5G36710.1 unknown protein1.7e-4667.11Show/hide
Query:  KSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAFTIAGAVSGCAM-----ASAATGRWFGVHMVFTVLTAIFQGSITVLVFTRTGD
        KS  N H +FLLCNYILLG+ASSCIFLT+SLRL PS+ G  +IFL+  TIA AVSGC++     ++ A+ R +G HMV TVLTAIFQG+++VL+FTRTGD
Subjt:  KSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAFTIAGAVSGCAM-----ASAATGRWFGVHMVFTVLTAIFQGSITVLVFTRTGD

Query:  FLGELKSYVREEDGSVILKLGGGLSGLIFCLEWIVLVLAFCLKYYLYVE
        FL  LKSYVREEDG VILKL GGL  L+FCLEWIVLVLAF LKY  Y++
Subjt:  FLGELKSYVREEDGSVILKLGGGLSGLIFCLEWIVLVLAFCLKYYLYVE

AT5G36800.1 unknown protein1.7e-4667.11Show/hide
Query:  KSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAFTIAGAVSGCAM-----ASAATGRWFGVHMVFTVLTAIFQGSITVLVFTRTGD
        KS  N H +FLLCNYILLG+ASSCIFLT+SLRL PS+ G  +IFL+  TIA AVSGC++     ++ A+ R +G HMV TVLTAIFQG+++VL+FTRTGD
Subjt:  KSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAFTIAGAVSGCAM-----ASAATGRWFGVHMVFTVLTAIFQGSITVLVFTRTGD

Query:  FLGELKSYVREEDGSVILKLGGGLSGLIFCLEWIVLVLAFCLKYYLYVE
        FL  LKSYVREEDG VILKL GGL  L+FCLEWIVLVLAF LKY  Y++
Subjt:  FLGELKSYVREEDGSVILKLGGGLSGLIFCLEWIVLVLAFCLKYYLYVE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCCTTTCACCTTCGTCTTCAACCTCCGTTTGTAAATCGCACTACAACATCCACAAACTCTTCCTCCTCTGCAACTACATCCTCCTCGGCGCCGCCTCCAGCTGCAT
TTTCCTTACTCTCTCCCTCCGCCTCGTCCCTTCCGTTTGCGGCTTCTTCATCATCTTCCTCCACGCCTTCACCATCGCCGGTGCCGTCTCTGGATGCGCCATGGCCTCTG
CTGCCACCGGCCGGTGGTTCGGTGTCCACATGGTTTTCACCGTCCTCACTGCCATCTTCCAAGGCTCCATCACAGTCTTGGTCTTCACTAGAACCGGTGACTTCCTCGGC
GAATTGAAATCGTATGTTCGAGAGGAAGACGGATCCGTGATTCTGAAATTGGGCGGGGGATTGAGCGGGTTGATCTTCTGTTTGGAGTGGATTGTTCTGGTTCTTGCGTT
TTGTTTGAAGTATTATTTGTATGTTGAAGGAAATGGAAGTGGTGAGGGTTTGAAGAGGAGTGCTAAGGTTCAGCAGTTTGAAGATTCAGCTTGGGCAGCACCGTTCCCTG
TTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGCCTTTCACCTTCGTCTTCAACCTCCGTTTGTAAATCGCACTACAACATCCACAAACTCTTCCTCCTCTGCAACTACATCCTCCTCGGCGCCGCCTCCAGCTGCAT
TTTCCTTACTCTCTCCCTCCGCCTCGTCCCTTCCGTTTGCGGCTTCTTCATCATCTTCCTCCACGCCTTCACCATCGCCGGTGCCGTCTCTGGATGCGCCATGGCCTCTG
CTGCCACCGGCCGGTGGTTCGGTGTCCACATGGTTTTCACCGTCCTCACTGCCATCTTCCAAGGCTCCATCACAGTCTTGGTCTTCACTAGAACCGGTGACTTCCTCGGC
GAATTGAAATCGTATGTTCGAGAGGAAGACGGATCCGTGATTCTGAAATTGGGCGGGGGATTGAGCGGGTTGATCTTCTGTTTGGAGTGGATTGTTCTGGTTCTTGCGTT
TTGTTTGAAGTATTATTTGTATGTTGAAGGAAATGGAAGTGGTGAGGGTTTGAAGAGGAGTGCTAAGGTTCAGCAGTTTGAAGATTCAGCTTGGGCAGCACCGTTCCCTG
TTTAG
Protein sequenceShow/hide protein sequence
MGLSPSSSTSVCKSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAFTIAGAVSGCAMASAATGRWFGVHMVFTVLTAIFQGSITVLVFTRTGDFLG
ELKSYVREEDGSVILKLGGGLSGLIFCLEWIVLVLAFCLKYYLYVEGNGSGEGLKRSAKVQQFEDSAWAAPFPV