; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC11G218080 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC11G218080
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionBeta-lactamase
Genome locationCicolChr11:18200605..18205569
RNA-Seq ExpressionCcUC11G218080
SyntenyCcUC11G218080
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AGC78982.1 hypothetical protein [Vicia faba]1.1e-1987.1Show/hide
Query:  CCLWISFVGKPP-----LINESSVLLATPRGQGRGRTVIPGFAVRYISIMLPSQTRHLMCQS
        CCLWIS  GKPP     LINESSVLLATPRGQGRGRTVIPGFAVRYISIMLPSQTRHL+CQS
Subjt:  CCLWISFVGKPP-----LINESSVLLATPRGQGRGRTVIPGFAVRYISIMLPSQTRHLMCQS

GAU48489.1 hypothetical protein TSUD_291740 [Trifolium subterraneum]5.0e-2080.28Show/hide
Query:  CCLWISFVGKPP-----LINESSVLLATPRGQGRGRTVIPGFAVRYISIMLPSQTRHLMCQSWGKLQKLGF
        CCLWIS  GKPP     LINESSVLLATPRGQGRGRTVIPGFAVRYISIMLPSQTRHL+CQS  K+++L F
Subjt:  CCLWISFVGKPP-----LINESSVLLATPRGQGRGRTVIPGFAVRYISIMLPSQTRHLMCQSWGKLQKLGF

GER46141.1 beta-lactamase, partial [Striga asiatica]5.4e-2280.77Show/hide
Query:  PLIASSGGLTLARRLYLLAG---TSDISFALKNPIATHTPGKATDSEEGLTDTDNPRGTRTNNMMLPSGAETRHNLPP
        PLIASSGGLTLARRL LLAG   T  +  +L +PIATHTPGKATDSEEGLTDTDNP GTRT NMMLPSGAETRH LPP
Subjt:  PLIASSGGLTLARRLYLLAG---TSDISFALKNPIATHTPGKATDSEEGLTDTDNPRGTRTNNMMLPSGAETRHNLPP

KAG5611066.1 hypothetical protein H5410_022347 [Solanum commersonii]3.9e-2088.89Show/hide
Query:  NPLLSLSNKGRVPFLSCPKTFWILIGERLSRGKVLHIGPAAFFISLAVSPSSAFRLGPAPGVR
        N LLSL  KGRVPFLSCPKTF+ILIGERLSRGKVLHIGPAAFFISLA+SPSSAFRLG A GVR
Subjt:  NPLLSLSNKGRVPFLSCPKTFWILIGERLSRGKVLHIGPAAFFISLAVSPSSAFRLGPAPGVR

QVJ97904.1 hypothetical protein [Apium graveolens]2.2e-1582.76Show/hide
Query:  CCLWISFVGKP-PLINESSVLLATPRGQGRGRTVIPGFAVRYISIMLPSQTRHLMCQS
        C LWI   GKP  LI+ SSVLL  PRGQGRGRTVIPGFAVRYISIMLPSQTRHLMCQS
Subjt:  CCLWISFVGKP-PLINESSVLLATPRGQGRGRTVIPGFAVRYISIMLPSQTRHLMCQS

TrEMBL top hitse value%identityAlignment
A0A2Z6PNR1 Uncharacterized protein2.4e-2080.28Show/hide
Query:  CCLWISFVGKPP-----LINESSVLLATPRGQGRGRTVIPGFAVRYISIMLPSQTRHLMCQSWGKLQKLGF
        CCLWIS  GKPP     LINESSVLLATPRGQGRGRTVIPGFAVRYISIMLPSQTRHL+CQS  K+++L F
Subjt:  CCLWISFVGKPP-----LINESSVLLATPRGQGRGRTVIPGFAVRYISIMLPSQTRHLMCQSWGKLQKLGF

A0A3Q7II15 Uncharacterized protein1.5e-2590.28Show/hide
Query:  DSLHQVIASNPLLSLSNKGRVPFLSCPKTFWILIGERLSRGKVLHIGPAAFFISLAVSPSSAFRLGPAPGVR
        DSLHQVIASN LLSL  KGRVPFLSCPKTF+ILIGERLSRGKVLHIGPAAFFISLA+SPSSAFRLG A GVR
Subjt:  DSLHQVIASNPLLSLSNKGRVPFLSCPKTFWILIGERLSRGKVLHIGPAAFFISLAVSPSSAFRLGPAPGVR

A0A5A7QQG8 Beta-lactamase (Fragment)2.6e-2280.77Show/hide
Query:  PLIASSGGLTLARRLYLLAG---TSDISFALKNPIATHTPGKATDSEEGLTDTDNPRGTRTNNMMLPSGAETRHNLPP
        PLIASSGGLTLARRL LLAG   T  +  +L +PIATHTPGKATDSEEGLTDTDNP GTRT NMMLPSGAETRH LPP
Subjt:  PLIASSGGLTLARRLYLLAG---TSDISFALKNPIATHTPGKATDSEEGLTDTDNPRGTRTNNMMLPSGAETRHNLPP

Q5M9Y9 Uncharacterized protein2.0e-1483.64Show/hide
Query:  GKPP------LINESSVLLATPRGQGRGRTVIPGFAVRYISIMLPSQTRHLMCQS
        GKPP      LI  SSVLL TPRGQGRGRTVIPGFAVRYISIMLPSQTRHLMCQS
Subjt:  GKPP------LINESSVLLATPRGQGRGRTVIPGFAVRYISIMLPSQTRHLMCQS

R4IUJ9 Uncharacterized protein5.4e-2087.1Show/hide
Query:  CCLWISFVGKPP-----LINESSVLLATPRGQGRGRTVIPGFAVRYISIMLPSQTRHLMCQS
        CCLWIS  GKPP     LINESSVLLATPRGQGRGRTVIPGFAVRYISIMLPSQTRHL+CQS
Subjt:  CCLWISFVGKPP-----LINESSVLLATPRGQGRGRTVIPGFAVRYISIMLPSQTRHLMCQS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGTTGTCTTTGGATTTCCTTTGTTGGAAAGCCCCCTTTGATTAATGAGAGTTCCGTGCTGCTCGCCACTCCCCGAGGCCAAGGACGGGGTCGAACCGTCATTCCAGGATT
TGCAGTCCGATACATTTCCATTATGTTACCTAGCCAAACCCGCCACCTCATGTGCCAAAGTTGGGGAAAACTCCAAAAACTAGGGTTCCAAAAAGCTTACCGCTCCGTGG
GAAACGATATCCGTTTTCGAAAAGGGCACCCCTACGAGACCCCTAAACTACAAGCTAGCGCGCAACGGCTTTTCCGCCGTTGTTGCTTGCAGCTTGCAGGCTCGAAAATC
TCTCTTTCGCCTCTTCTCCATGTCTCCATTCTGATTGATTCGCTTCTTCTTTTGCGCAAGCGCTTGGTTTTGGGCGGCCCATCTGGTGGGGGCAGCTATCACTGCTGGAA
GCCCCTGCGGTTGTTCGGCTGCGTACTCCCCGTCCGCACTCGTTACGCTGTTCGACTGAACTCGTTGGCTCCGCGCTCTATTCGGTCGGAACCCGATTCCCTTCACCAAG
TCATCGCCAGCAATCCGCTCTTATCCCTTTCAAACAAAGGGCGAGTTCCTTTCTTGTCTTGCCCAAAAACTTTCTGGATTCTCATTGGAGAAAGACTCTCCCGCGGCAAG
GTTTTACACATAGGGCCAGCTGCTTTCTTTATCTCGCTTGCCGTTAGTCCGTCTAGCGCCTTTCGGTTGGGGCCCGCCCCGGGGGTTAGACCGCTTGGGTTAGATTTTGG
AGTCTGGAAGGCATCCTTGTATTCTTTCAAAAGGTCAGCCATTCTTCTCCCATTAGACTTGGGCGGAGAATACCACTCTCTCAATAACAAGAAGAAAGTAGCAATTCCGT
TTCCAATGGCGAGAACAGACAGCTATTTATTGGCAGCTTCGCCTATCTATTCTATTATGGCCGGCTTGGAGACAGAAGAGGAAGACCATCATCCCTATCCGGACAGACAA
TCTAAACAAAAGAGTCGACGGACTCTTCGAGTCTCCCCGGGACCGTGGGTGACAGCCTGCACTATGAGTGCTTGCTGCTCCGCCCGAAGCGCTTGCAGCCTCCCCTCCCA
ATCCTCGACCCGTTGTCTGAAAGCGCGAATGCGCGCTTCTTTCCGAGCGGGATGCTATGTTTTAAAAGGAGGATGGCAATTGGCTTCAAAGTCTACAGTAACAGGGTATT
CTTTCACACTTGGCTTGAATTCAATAGCATCGGCGACATCAATTGCGACAACAATGGAATCGTGCAAACAGTCTAAAGAGGCCTGCACCCCTATCCAAGGGCCATTGATT
GCCTCGTCTGGAGGACTGACACTGGCTCGCAGGCTTTACTTGCTTGCAGGAACTTCAGATATCTCTTTTGCCTTAAAGAATCCAATTGCAACTCACACCCCAGGGAAGGC
AACTGACTCAGAGGAGGGGTTGACAGATACAGATAACCCACGGGGCACTCGTACTAACAATATGATGTTACCCTCTGGGGCAGAGACTAGACACAACTTACCCCCGGAGA
CTAGGCAAGACTACCAGGGAACTGAACGAGTACATAGGACCATTGAATCTGTTGGGGGCGGCAAAGCTCGAGTGTTACGAGAGGGAATTTACAGGATTGACTTGCCTGAG
CATAGTCAAAGGCTAATGCTTTGTCTTCTCTTCTGTGGCTCAAGCCAAATTTCCTCTTTCCTGGTGTATGTACCTTACCCGCTCCTTAAGGGATGCCGGCTTGGTTGGAA
CCTTGTGAAGGACCAAGCAACAGAACGTTATGGGGTAGTTCCAAAGGAAATGACTGATGGTGTAGCCAAGGTTAATAAGGAATATGAGATGCTAGTCTTGGATTACGAAG
AATCGATGGTTATTACTCTTTCGTTTTCTTATAGAATGGCTGAGAAGTCAGGTAGCGAAGCCTTATGTTATGCTATTGAATGCGTTGATGTATGGGAGGATAGAATACCC
GAGACTTGCTGCCGGAAAGAGCTCATTAGAGGCATTCCACTTCCAATGAGATGTCTTAGGCTGAATGATGGCATTGAGATGGCTTTGCTCTGTAGACAGAGTCTAGATAG
AAGGGATTCAAAGGGAAAGTCTCAAGTAGAGTTTAGCAATCAAAAGAACATTGGAACTAGGGAATCCAGCTGCCATTTCGCGTTATACCAGAAAGAGGGAAAAAGAGGTA
GCATAAGGCGCAAGGGCGTTAAGCGTGCCAGTGAGTTAGCAGCTGTCGGAAAAAGCGCAATAGCCATAGAGTCAACCCCTGGACCCGGTTCAAATGATTTGATCCAAAGT
GTCATCACAAGAAGAAGCTCGTGCCACTTAAAACAATATACATTGCCTCGTGTTAGCCGAACTGGGATTGGTAGAAGGAAAAAT
mRNA sequenceShow/hide mRNA sequence
TGTTGTCTTTGGATTTCCTTTGTTGGAAAGCCCCCTTTGATTAATGAGAGTTCCGTGCTGCTCGCCACTCCCCGAGGCCAAGGACGGGGTCGAACCGTCATTCCAGGATT
TGCAGTCCGATACATTTCCATTATGTTACCTAGCCAAACCCGCCACCTCATGTGCCAAAGTTGGGGAAAACTCCAAAAACTAGGGTTCCAAAAAGCTTACCGCTCCGTGG
GAAACGATATCCGTTTTCGAAAAGGGCACCCCTACGAGACCCCTAAACTACAAGCTAGCGCGCAACGGCTTTTCCGCCGTTGTTGCTTGCAGCTTGCAGGCTCGAAAATC
TCTCTTTCGCCTCTTCTCCATGTCTCCATTCTGATTGATTCGCTTCTTCTTTTGCGCAAGCGCTTGGTTTTGGGCGGCCCATCTGGTGGGGGCAGCTATCACTGCTGGAA
GCCCCTGCGGTTGTTCGGCTGCGTACTCCCCGTCCGCACTCGTTACGCTGTTCGACTGAACTCGTTGGCTCCGCGCTCTATTCGGTCGGAACCCGATTCCCTTCACCAAG
TCATCGCCAGCAATCCGCTCTTATCCCTTTCAAACAAAGGGCGAGTTCCTTTCTTGTCTTGCCCAAAAACTTTCTGGATTCTCATTGGAGAAAGACTCTCCCGCGGCAAG
GTTTTACACATAGGGCCAGCTGCTTTCTTTATCTCGCTTGCCGTTAGTCCGTCTAGCGCCTTTCGGTTGGGGCCCGCCCCGGGGGTTAGACCGCTTGGGTTAGATTTTGG
AGTCTGGAAGGCATCCTTGTATTCTTTCAAAAGGTCAGCCATTCTTCTCCCATTAGACTTGGGCGGAGAATACCACTCTCTCAATAACAAGAAGAAAGTAGCAATTCCGT
TTCCAATGGCGAGAACAGACAGCTATTTATTGGCAGCTTCGCCTATCTATTCTATTATGGCCGGCTTGGAGACAGAAGAGGAAGACCATCATCCCTATCCGGACAGACAA
TCTAAACAAAAGAGTCGACGGACTCTTCGAGTCTCCCCGGGACCGTGGGTGACAGCCTGCACTATGAGTGCTTGCTGCTCCGCCCGAAGCGCTTGCAGCCTCCCCTCCCA
ATCCTCGACCCGTTGTCTGAAAGCGCGAATGCGCGCTTCTTTCCGAGCGGGATGCTATGTTTTAAAAGGAGGATGGCAATTGGCTTCAAAGTCTACAGTAACAGGGTATT
CTTTCACACTTGGCTTGAATTCAATAGCATCGGCGACATCAATTGCGACAACAATGGAATCGTGCAAACAGTCTAAAGAGGCCTGCACCCCTATCCAAGGGCCATTGATT
GCCTCGTCTGGAGGACTGACACTGGCTCGCAGGCTTTACTTGCTTGCAGGAACTTCAGATATCTCTTTTGCCTTAAAGAATCCAATTGCAACTCACACCCCAGGGAAGGC
AACTGACTCAGAGGAGGGGTTGACAGATACAGATAACCCACGGGGCACTCGTACTAACAATATGATGTTACCCTCTGGGGCAGAGACTAGACACAACTTACCCCCGGAGA
CTAGGCAAGACTACCAGGGAACTGAACGAGTACATAGGACCATTGAATCTGTTGGGGGCGGCAAAGCTCGAGTGTTACGAGAGGGAATTTACAGGATTGACTTGCCTGAG
CATAGTCAAAGGCTAATGCTTTGTCTTCTCTTCTGTGGCTCAAGCCAAATTTCCTCTTTCCTGGTGTATGTACCTTACCCGCTCCTTAAGGGATGCCGGCTTGGTTGGAA
CCTTGTGAAGGACCAAGCAACAGAACGTTATGGGGTAGTTCCAAAGGAAATGACTGATGGTGTAGCCAAGGTTAATAAGGAATATGAGATGCTAGTCTTGGATTACGAAG
AATCGATGGTTATTACTCTTTCGTTTTCTTATAGAATGGCTGAGAAGTCAGGTAGCGAAGCCTTATGTTATGCTATTGAATGCGTTGATGTATGGGAGGATAGAATACCC
GAGACTTGCTGCCGGAAAGAGCTCATTAGAGGCATTCCACTTCCAATGAGATGTCTTAGGCTGAATGATGGCATTGAGATGGCTTTGCTCTGTAGACAGAGTCTAGATAG
AAGGGATTCAAAGGGAAAGTCTCAAGTAGAGTTTAGCAATCAAAAGAACATTGGAACTAGGGAATCCAGCTGCCATTTCGCGTTATACCAGAAAGAGGGAAAAAGAGGTA
GCATAAGGCGCAAGGGCGTTAAGCGTGCCAGTGAGTTAGCAGCTGTCGGAAAAAGCGCAATAGCCATAGAGTCAACCCCTGGACCCGGTTCAAATGATTTGATCCAAAGT
GTCATCACAAGAAGAAGCTCGTGCCACTTAAAACAATATACATTGCCTCGTGTTAGCCGAACTGGGATTGGTAGAAGGAAAAAT
Protein sequenceShow/hide protein sequence
CCLWISFVGKPPLINESSVLLATPRGQGRGRTVIPGFAVRYISIMLPSQTRHLMCQSWGKLQKLGFQKAYRSVGNDIRFRKGHPYETPKLQASAQRLFRRCCLQLAGSKI
SLSPLLHVSILIDSLLLLRKRLVLGGPSGGGSYHCWKPLRLFGCVLPVRTRYAVRLNSLAPRSIRSEPDSLHQVIASNPLLSLSNKGRVPFLSCPKTFWILIGERLSRGK
VLHIGPAAFFISLAVSPSSAFRLGPAPGVRPLGLDFGVWKASLYSFKRSAILLPLDLGGEYHSLNNKKKVAIPFPMARTDSYLLAASPIYSIMAGLETEEEDHHPYPDRQ
SKQKSRRTLRVSPGPWVTACTMSACCSARSACSLPSQSSTRCLKARMRASFRAGCYVLKGGWQLASKSTVTGYSFTLGLNSIASATSIATTMESCKQSKEACTPIQGPLI
ASSGGLTLARRLYLLAGTSDISFALKNPIATHTPGKATDSEEGLTDTDNPRGTRTNNMMLPSGAETRHNLPPETRQDYQGTERVHRTIESVGGGKARVLREGIYRIDLPE
HSQRLMLCLLFCGSSQISSFLVYVPYPLLKGCRLGWNLVKDQATERYGVVPKEMTDGVAKVNKEYEMLVLDYEESMVITLSFSYRMAEKSGSEALCYAIECVDVWEDRIP
ETCCRKELIRGIPLPMRCLRLNDGIEMALLCRQSLDRRDSKGKSQVEFSNQKNIGTRESSCHFALYQKEGKRGSIRRKGVKRASELAAVGKSAIAIESTPGPGSNDLIQS
VITRRSSCHLKQYTLPRVSRTGIGRRKN