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CcUC11G218090 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC11G218090
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionProton_antipo_M domain-containing protein
Genome locationCicolChr11:18201906..18205884
RNA-Seq ExpressionCcUC11G218090
SyntenyCcUC11G218090
Gene Ontology termsGO:0009507 - chloroplast (cellular component)
GO:0009579 - thylakoid (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4072346.1 unnamed protein product [Lactuca saligna]1.1e-0582.5Show/hide
Query:  PARKEARIRAFRQRVEDWEGRLQALRAEQQALIVQAVTHG
        P  KEARIRA R+R+ED EGR QALRAEQQALIVQAVTHG
Subjt:  PARKEARIRAFRQRVEDWEGRLQALRAEQQALIVQAVTHG

CAB4099471.1 unnamed protein product [Lactuca saligna]1.1e-0582.5Show/hide
Query:  PARKEARIRAFRQRVEDWEGRLQALRAEQQALIVQAVTHG
        P  KEARIRA R+R+ED EGR QALRAEQQALIVQAVTHG
Subjt:  PARKEARIRAFRQRVEDWEGRLQALRAEQQALIVQAVTHG

EEF27212.1 conserved hypothetical protein, partial [Ricinus communis]7.4e-0756.72Show/hide
Query:  RTGREKEKEQRIYKSNGRRMADLLKEYKDAFQTPKSNPSGLTPGAGPNRKALDGLTASEIKKAAGPM
        RTGREKEKEQRIYKSNG RMAD L     AF T K NPSGLTP  GP  K          K+++ P+
Subjt:  RTGREKEKEQRIYKSNGRRMADLLKEYKDAFQTPKSNPSGLTPGAGPNRKALDGLTASEIKKAAGPM

PHT68651.1 hypothetical protein T459_28138 [Capsicum annuum]3.2e-1880.6Show/hide
Query:  KSNPSGLTPGAGPNRKALDGLTASEIKKAAGPMCKTLPRESLSPMRIQKVFGQDKKGTRPLFERDKS
        K   S LTP A PNRKAL GL ASEIKKAAGPMCKTLPRESLS MRI+KV GQDKKGTRPL  RDKS
Subjt:  KSNPSGLTPGAGPNRKALDGLTASEIKKAAGPMCKTLPRESLSPMRIQKVFGQDKKGTRPLFERDKS

PLY71280.1 hypothetical protein LSAT_0X38260 [Lactuca sativa]1.1e-0582.5Show/hide
Query:  PARKEARIRAFRQRVEDWEGRLQALRAEQQALIVQAVTHG
        P  KEARIRA R+R+ED EGR QALRAEQQALIVQAVTHG
Subjt:  PARKEARIRAFRQRVEDWEGRLQALRAEQQALIVQAVTHG

TrEMBL top hitse value%identityAlignment
A0A2G2YGD6 Proton_antipo_M domain-containing protein1.6e-1880.6Show/hide
Query:  KSNPSGLTPGAGPNRKALDGLTASEIKKAAGPMCKTLPRESLSPMRIQKVFGQDKKGTRPLFERDKS
        K   S LTP A PNRKAL GL ASEIKKAAGPMCKTLPRESLS MRI+KV GQDKKGTRPL  RDKS
Subjt:  KSNPSGLTPGAGPNRKALDGLTASEIKKAAGPMCKTLPRESLSPMRIQKVFGQDKKGTRPLFERDKS

A0A2J6K863 Uncharacterized protein5.2e-0682.5Show/hide
Query:  PARKEARIRAFRQRVEDWEGRLQALRAEQQALIVQAVTHG
        P  KEARIRA R+R+ED EGR QALRAEQQALIVQAVTHG
Subjt:  PARKEARIRAFRQRVEDWEGRLQALRAEQQALIVQAVTHG

A0A6S7LWT6 Uncharacterized protein5.2e-0682.5Show/hide
Query:  PARKEARIRAFRQRVEDWEGRLQALRAEQQALIVQAVTHG
        P  KEARIRA R+R+ED EGR QALRAEQQALIVQAVTHG
Subjt:  PARKEARIRAFRQRVEDWEGRLQALRAEQQALIVQAVTHG

A0A803Q9F3 Uncharacterized protein2.2e-1275Show/hide
Query:  REKEKEQRIYKSNGRRMADLLKEYKDAFQT-PKSNPSGLTPGAGPNRKALDGLTASEIKKAAGP
        REKEKEQRIYKSNGRRMAD L     AF+T  K NPSGLTPG  PNRK LD L AS+IKKAAGP
Subjt:  REKEKEQRIYKSNGRRMADLLKEYKDAFQT-PKSNPSGLTPGAGPNRKALDGLTASEIKKAAGP

B9TAA3 Uncharacterized protein (Fragment)3.6e-0756.72Show/hide
Query:  RTGREKEKEQRIYKSNGRRMADLLKEYKDAFQTPKSNPSGLTPGAGPNRKALDGLTASEIKKAAGPM
        RTGREKEKEQRIYKSNG RMAD L     AF T K NPSGLTP  GP  K          K+++ P+
Subjt:  RTGREKEKEQRIYKSNGRRMADLLKEYKDAFQTPKSNPSGLTPGAGPNRKALDGLTASEIKKAAGPM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCGGCTAACACGAGGCAATGTATATTGTTTTAAGTGGCACGAGCTTCTTCTTGTGATGACACTTTGGATCAAATCATTTGAACCGGGTCCAGGGGTTGAC
TCTATGGCTATTGCGCTTTTTCCGACAGCTGCTAACTCACTGGCACGCTTAACGCCCTTGCGCCTGGTCTTTCAAAGCCTTGGGCTTGAGCAACGTTCGAATTCC
GGACTCTGTCTACAGAGCAAAGCCATCTCAATGCCATCATTCAGCCTAAGACATCTCATTGGAAGTGGAATGCCTCTAATGAGCTCTTTCCGGCAGCAAGTCTCG
GGAAAGAGGAAATTTGGCTTGAGCCACAGAAGAGAAGACAAAGCATTAGCCTTTGACTATGCTCAGGCTGAACACCAAGTCAATCCTTACGAGTGCCCCGTGGGT
TATCTGTATCTGTCAACCCCTCCTCTGAGTCAGTTGCCTTCCCTGGGGTGTGAGTTGCAATTGGATTCTTTAAGGCAAAAGAGATATCTGAAGTTCCTGCAAGCA
AGTAAAGCCTGCGAGCCAGTGTCAGTCCTCCAGACGAGGCAATCAATGGCCCTAACAGGCATTTCAGCCTCTTTAGACTGTTTGCACGATTCCATTGTTGTCGCA
ATTGATGTCGCCGATGCTATTGAATTCAAGCCAAGTGTGAAAGAATACCCTGTTACTGTGCTCGAAGAAGCCCGTCAATCTAGATGCCAACAATCAGTCCGCAAA
CATCCCGCTCGGAAAGAAGCGCGCATTCGCGCTTTCAGACAACGGGTCGAGGATTGGGAGGGGAGGCTGCAAGCGCTTCGGGCGGAGCAGCAAGCACTCATAGTG
CAGGCTGTCACCCACGGTCCCGGGGAGACTCGAAGAGTCCGTCGACTCTTTTGTTTAGATTGTCTGTCTGTAGACGCAAAGTCGGGGAGAACTGGAAGAGAGAAG
GAAAAAGAGCAAAGGATTTACAAGTCTAATGGGAGAAGAATGGCTGACCTTTTGAAAGAATACAAGGATGCCTTCCAGACTCCAAAATCTAACCCAAGCGGTCTA
ACCCCCGGGGCGGGCCCCAACCGAAAGGCGCTAGACGGACTAACGGCAAGCGAGATAAAGAAAGCAGCTGGCCCTATGTGTAAAACCTTGCCGCGGGAGAGTCTT
TCTCCAATGAGAATCCAGAAAGTTTTTGGGCAAGACAAGAAAGGAACTCGCCCTTTGTTTGAAAGGGATAAGAGCGGATTGCTGGCGATGACTTGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTTCGGCTAACACGAGGCAATGTATATTGTTTTAAGTGGCACGAGCTTCTTCTTGTGATGACACTTTGGATCAAATCATTTGAACCGGGTCCAGGGGTTGAC
TCTATGGCTATTGCGCTTTTTCCGACAGCTGCTAACTCACTGGCACGCTTAACGCCCTTGCGCCTGGTCTTTCAAAGCCTTGGGCTTGAGCAACGTTCGAATTCC
GGACTCTGTCTACAGAGCAAAGCCATCTCAATGCCATCATTCAGCCTAAGACATCTCATTGGAAGTGGAATGCCTCTAATGAGCTCTTTCCGGCAGCAAGTCTCG
GGAAAGAGGAAATTTGGCTTGAGCCACAGAAGAGAAGACAAAGCATTAGCCTTTGACTATGCTCAGGCTGAACACCAAGTCAATCCTTACGAGTGCCCCGTGGGT
TATCTGTATCTGTCAACCCCTCCTCTGAGTCAGTTGCCTTCCCTGGGGTGTGAGTTGCAATTGGATTCTTTAAGGCAAAAGAGATATCTGAAGTTCCTGCAAGCA
AGTAAAGCCTGCGAGCCAGTGTCAGTCCTCCAGACGAGGCAATCAATGGCCCTAACAGGCATTTCAGCCTCTTTAGACTGTTTGCACGATTCCATTGTTGTCGCA
ATTGATGTCGCCGATGCTATTGAATTCAAGCCAAGTGTGAAAGAATACCCTGTTACTGTGCTCGAAGAAGCCCGTCAATCTAGATGCCAACAATCAGTCCGCAAA
CATCCCGCTCGGAAAGAAGCGCGCATTCGCGCTTTCAGACAACGGGTCGAGGATTGGGAGGGGAGGCTGCAAGCGCTTCGGGCGGAGCAGCAAGCACTCATAGTG
CAGGCTGTCACCCACGGTCCCGGGGAGACTCGAAGAGTCCGTCGACTCTTTTGTTTAGATTGTCTGTCTGTAGACGCAAAGTCGGGGAGAACTGGAAGAGAGAAG
GAAAAAGAGCAAAGGATTTACAAGTCTAATGGGAGAAGAATGGCTGACCTTTTGAAAGAATACAAGGATGCCTTCCAGACTCCAAAATCTAACCCAAGCGGTCTA
ACCCCCGGGGCGGGCCCCAACCGAAAGGCGCTAGACGGACTAACGGCAAGCGAGATAAAGAAAGCAGCTGGCCCTATGTGTAAAACCTTGCCGCGGGAGAGTCTT
TCTCCAATGAGAATCCAGAAAGTTTTTGGGCAAGACAAGAAAGGAACTCGCCCTTTGTTTGAAAGGGATAAGAGCGGATTGCTGGCGATGACTTGGTGA
Protein sequenceShow/hide protein sequence
MLRLTRGNVYCFKWHELLLVMTLWIKSFEPGPGVDSMAIALFPTAANSLARLTPLRLVFQSLGLEQRSNSGLCLQSKAISMPSFSLRHLIGSGMPLMSSFRQQVS
GKRKFGLSHRREDKALAFDYAQAEHQVNPYECPVGYLYLSTPPLSQLPSLGCELQLDSLRQKRYLKFLQASKACEPVSVLQTRQSMALTGISASLDCLHDSIVVA
IDVADAIEFKPSVKEYPVTVLEEARQSRCQQSVRKHPARKEARIRAFRQRVEDWEGRLQALRAEQQALIVQAVTHGPGETRRVRRLFCLDCLSVDAKSGRTGREK
EKEQRIYKSNGRRMADLLKEYKDAFQTPKSNPSGLTPGAGPNRKALDGLTASEIKKAAGPMCKTLPRESLSPMRIQKVFGQDKKGTRPLFERDKSGLLAMTW