; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC11G218730 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC11G218730
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
Genome locationCicolChr11:20656461..20656820
RNA-Seq ExpressionCcUC11G218730
SyntenyCcUC11G218730
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651697.1 hypothetical protein Csa_006343 [Cucumis sativus]1.6e-2159.55Show/hide
Query:  MATQKLVTIPVIVMVIFACFVSTSMLLNHNSSNSIIKGDVLNMHCVRPCSNPYDDESYYNDCVRENNSAGFCYPKLPNISNEKDCCCNI
        MATQKL T+ +++++I AC VST+            KGDVLN++CVRPCS+ YDDES YNDC+REN  AGFCYPKLP  S +KDCCCN+
Subjt:  MATQKLVTIPVIVMVIFACFVSTSMLLNHNSSNSIIKGDVLNMHCVRPCSNPYDDESYYNDCVRENNSAGFCYPKLPNISNEKDCCCNI

KAE8651701.1 hypothetical protein Csa_006400, partial [Cucumis sativus]6.1e-1664.62Show/hide
Query:  SMLLNHNSSNSIIKGDVLNMHCVRPCSNPYDDESYYNDCVRENNSAGFCYPKLPNISNEKDCCCN
        ++L N    + I KGDVLNMHCV+PCS+ YDDES YNDC++EN  AGFCYPKLP  S +KDCCC+
Subjt:  SMLLNHNSSNSIIKGDVLNMHCVRPCSNPYDDESYYNDCVRENNSAGFCYPKLPNISNEKDCCCN

KAG6586428.1 hypothetical protein SDJN03_19161, partial [Cucurbita argyrosperma subsp. sororia]6.7e-1551.14Show/hide
Query:  MATQKLVTIPVIVMVIFACFVSTSMLLNHNSSNSIIKGDVLNMHCVRPCSNPYDDESYYNDCVRENNSAGFCYPKLPNISNEKDCCCN
        MA++KL T+  IVM++F  F S++            KGD+  M C+RPC + +DD+S Y+DCVR N  AGFCYPKLP+++NEKDCCCN
Subjt:  MATQKLVTIPVIVMVIFACFVSTSMLLNHNSSNSIIKGDVLNMHCVRPCSNPYDDESYYNDCVRENNSAGFCYPKLPNISNEKDCCCN

KGN54497.1 hypothetical protein Csa_012842 [Cucumis sativus]1.0e-0742.05Show/hide
Query:  MATQKLVTIPVIVMVIFACFVSTSMLLNHNSSNSIIKGDVLNMHCVRPCSNPYDDESYYNDCVRENNSAGFCYPKLPNISNEKDCCCN
        M TQKL  + ++V V F+CF S+            ++GD L  +CV PCSN   D      C+ ++  AGFC PKLP IS+ K CCCN
Subjt:  MATQKLVTIPVIVMVIFACFVSTSMLLNHNSSNSIIKGDVLNMHCVRPCSNPYDDESYYNDCVRENNSAGFCYPKLPNISNEKDCCCN

KGN61228.1 hypothetical protein Csa_006463 [Cucumis sativus]1.5e-2261.8Show/hide
Query:  MATQKLVTIPVIVMVIFACFVSTSMLLNHNSSNSIIKGDVLNMHCVRPCSNPYDDESYYNDCVRENNSAGFCYPKLPNISNEKDCCCNI
        MATQKL TI ++V++IFAC  ST+            KGDVLN+HCVRPCS+ YDDES YNDC++EN  AGFCYPKLP  S +KDCCCN+
Subjt:  MATQKLVTIPVIVMVIFACFVSTSMLLNHNSSNSIIKGDVLNMHCVRPCSNPYDDESYYNDCVRENNSAGFCYPKLPNISNEKDCCCNI

TrEMBL top hitse value%identityAlignment
A0A0A0L1R8 Uncharacterized protein5.0e-0842.05Show/hide
Query:  MATQKLVTIPVIVMVIFACFVSTSMLLNHNSSNSIIKGDVLNMHCVRPCSNPYDDESYYNDCVRENNSAGFCYPKLPNISNEKDCCCN
        M TQKL  + ++V V F+CF S+            ++GD L  +CV PCSN   D      C+ ++  AGFC PKLP IS+ K CCCN
Subjt:  MATQKLVTIPVIVMVIFACFVSTSMLLNHNSSNSIIKGDVLNMHCVRPCSNPYDDESYYNDCVRENNSAGFCYPKLPNISNEKDCCCN

A0A0A0LHG9 Uncharacterized protein7.2e-2361.8Show/hide
Query:  MATQKLVTIPVIVMVIFACFVSTSMLLNHNSSNSIIKGDVLNMHCVRPCSNPYDDESYYNDCVRENNSAGFCYPKLPNISNEKDCCCNI
        MATQKL TI ++V++IFAC  ST+            KGDVLN+HCVRPCS+ YDDES YNDC++EN  AGFCYPKLP  S +KDCCCN+
Subjt:  MATQKLVTIPVIVMVIFACFVSTSMLLNHNSSNSIIKGDVLNMHCVRPCSNPYDDESYYNDCVRENNSAGFCYPKLPNISNEKDCCCNI

A0A0A0LJG5 Uncharacterized protein2.1e-2263.64Show/hide
Query:  MATQKLVTIPVIVMVIFACFVSTSMLLNHNSSNSIIKGDVLNMHCVRPCSNPYDDESYYNDCVRENNSAGFCYPKLPNISNEKDCCCN
        MATQKL TI ++V+VIF C VST+            KGDVLN+HCVRPC + YDDES YNDC+REN  AGFCYPKLP  S +KDCCCN
Subjt:  MATQKLVTIPVIVMVIFACFVSTSMLLNHNSSNSIIKGDVLNMHCVRPCSNPYDDESYYNDCVRENNSAGFCYPKLPNISNEKDCCCN

A0A0A0LKF5 Uncharacterized protein3.5e-1775.47Show/hide
Query:  KGDVLNMHCVRPCSNPYDDESYYNDCVRENNSAGFCYPKLPNISNEKDCCCNI
        KGD+LN+HCVRPCS+ YDDES YNDC+REN  AGFCYPKLP  S +KDCCCN+
Subjt:  KGDVLNMHCVRPCSNPYDDESYYNDCVRENNSAGFCYPKLPNISNEKDCCCNI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ACGCATAATTATTCAAAATGCCTAAGAGACATGGCAACTCAGAAGCTTGTTACAATACCAGTCATTGTCATGGTGATATTCGCTTGTTTTGTATCAACAAGTATGCTCTT
AAATCACAACTCCTCTAATTCCATAATCAAAGGAGATGTGTTAAATATGCATTGTGTTCGACCATGCTCTAACCCTTATGATGATGAGTCATATTATAATGATTGCGTCC
GAGAGAATAATAGTGCTGGATTTTGTTACCCAAAACTACCTAACATTTCTAATGAAAAAGATTGTTGCTGCAATATTTGA
mRNA sequenceShow/hide mRNA sequence
ACGCATAATTATTCAAAATGCCTAAGAGACATGGCAACTCAGAAGCTTGTTACAATACCAGTCATTGTCATGGTGATATTCGCTTGTTTTGTATCAACAAGTATGCTCTT
AAATCACAACTCCTCTAATTCCATAATCAAAGGAGATGTGTTAAATATGCATTGTGTTCGACCATGCTCTAACCCTTATGATGATGAGTCATATTATAATGATTGCGTCC
GAGAGAATAATAGTGCTGGATTTTGTTACCCAAAACTACCTAACATTTCTAATGAAAAAGATTGTTGCTGCAATATTTGA
Protein sequenceShow/hide protein sequence
THNYSKCLRDMATQKLVTIPVIVMVIFACFVSTSMLLNHNSSNSIIKGDVLNMHCVRPCSNPYDDESYYNDCVRENNSAGFCYPKLPNISNEKDCCCNI