; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC11G218780 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC11G218780
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Descriptionprefoldin subunit 1
Genome locationCicolChr11:20895816..20900628
RNA-Seq ExpressionCcUC11G218780
SyntenyCcUC11G218780
Gene Ontology termsGO:0006457 - protein folding (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0016272 - prefoldin complex (cellular component)
GO:0044183 - protein folding chaperone (molecular function)
GO:0051082 - unfolded protein binding (molecular function)
InterPro domainsIPR002777 - Prefoldin beta-like
IPR009053 - Prefoldin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004152848.1 prefoldin subunit 1 isoform X1 [Cucumis sativus]5.4e-5796.9Show/hide
Query:  MADEANRAIFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIGRTFVLESKSVLMNEQEQKFKDSETAIASLQSSKEYLEK
        MADE NRA FLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQL+EDTN YKSIGRTFVLESKSVLMNEQEQKFKDSETAIASLQSSKEYLEK
Subjt:  MADEANRAIFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIGRTFVLESKSVLMNEQEQKFKDSETAIASLQSSKEYLEK

Query:  QMAEVENNLRELLQQDPGIARQIMSMSVA
        QMAEVENNLRELLQQDPGIARQIMSMSVA
Subjt:  QMAEVENNLRELLQQDPGIARQIMSMSVA

XP_008450462.1 PREDICTED: prefoldin subunit 1 isoform X1 [Cucumis melo]4.3e-5493.75Show/hide
Query:  MADEANRAIFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIGRTFVLESKSVLMNEQEQKFKDSETAIASLQSSKEYLEK
        MA+EANR  FLEIQGRMIEITGKLKQLQTQIR KEGEKKRAFLTLEELKQLSEDTN YKSIGRTFVLESKSVLMNEQEQKFKDSETAIASLQSSKEYLE+
Subjt:  MADEANRAIFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIGRTFVLESKSVLMNEQEQKFKDSETAIASLQSSKEYLEK

Query:  QMAEVENNLRELLQQDPGIARQIMSMSV
        QMAEVENNLRELLQ DPGIARQIMSMS+
Subjt:  QMAEVENNLRELLQQDPGIARQIMSMSV

XP_022149806.1 prefoldin subunit 1 [Momordica charantia]1.1e-5493.02Show/hide
Query:  MADEANRAIFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIGRTFVLESKSVLMNEQEQKFKDSETAIASLQSSKEYLEK
        MADEANR  FLEIQGRMIE+TGKLKQ+QTQIRNKEGEKKRAFLTLEEL+QLSEDTNAYKSIGRTFVLE KSVLMNEQEQK KDSE AIASLQ+SKEYLEK
Subjt:  MADEANRAIFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIGRTFVLESKSVLMNEQEQKFKDSETAIASLQSSKEYLEK

Query:  QMAEVENNLRELLQQDPGIARQIMSMSVA
        QMAEVENNLRELLQQDPGIARQIMSMSVA
Subjt:  QMAEVENNLRELLQQDPGIARQIMSMSVA

XP_022929581.1 prefoldin subunit 1-like [Cucurbita moschata]1.2e-5391.47Show/hide
Query:  MADEANRAIFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIGRTFVLESKSVLMNEQEQKFKDSETAIASLQSSKEYLEK
        MAD+ANRA FLEIQGRMIEITGKLKQ+QTQIRNKEGEKKRAFLTLEELKQLS+DTNAYKSIGRTFVLE KSVLMNEQEQK KDSE AI SL SSKEYLEK
Subjt:  MADEANRAIFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIGRTFVLESKSVLMNEQEQKFKDSETAIASLQSSKEYLEK

Query:  QMAEVENNLRELLQQDPGIARQIMSMSVA
        Q+AEVENNLRELLQQDPGIARQIMSMS+A
Subjt:  QMAEVENNLRELLQQDPGIARQIMSMSVA

XP_031736852.1 prefoldin subunit 1 isoform X2 [Cucumis sativus]1.2e-5394.57Show/hide
Query:  MADEANRAIFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIGRTFVLESKSVLMNEQEQKFKDSETAIASLQSSKEYLEK
        MADE     FLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQL+EDTN YKSIGRTFVLESKSVLMNEQEQKFKDSETAIASLQSSKEYLEK
Subjt:  MADEANRAIFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIGRTFVLESKSVLMNEQEQKFKDSETAIASLQSSKEYLEK

Query:  QMAEVENNLRELLQQDPGIARQIMSMSVA
        QMAEVENNLRELLQQDPGIARQIMSMSVA
Subjt:  QMAEVENNLRELLQQDPGIARQIMSMSVA

TrEMBL top hitse value%identityAlignment
A0A0A0LJF7 Uncharacterized protein2.6e-5796.9Show/hide
Query:  MADEANRAIFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIGRTFVLESKSVLMNEQEQKFKDSETAIASLQSSKEYLEK
        MADE NRA FLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQL+EDTN YKSIGRTFVLESKSVLMNEQEQKFKDSETAIASLQSSKEYLEK
Subjt:  MADEANRAIFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIGRTFVLESKSVLMNEQEQKFKDSETAIASLQSSKEYLEK

Query:  QMAEVENNLRELLQQDPGIARQIMSMSVA
        QMAEVENNLRELLQQDPGIARQIMSMSVA
Subjt:  QMAEVENNLRELLQQDPGIARQIMSMSVA

A0A1S3BP94 prefoldin subunit 1 isoform X12.1e-5493.75Show/hide
Query:  MADEANRAIFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIGRTFVLESKSVLMNEQEQKFKDSETAIASLQSSKEYLEK
        MA+EANR  FLEIQGRMIEITGKLKQLQTQIR KEGEKKRAFLTLEELKQLSEDTN YKSIGRTFVLESKSVLMNEQEQKFKDSETAIASLQSSKEYLE+
Subjt:  MADEANRAIFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIGRTFVLESKSVLMNEQEQKFKDSETAIASLQSSKEYLEK

Query:  QMAEVENNLRELLQQDPGIARQIMSMSV
        QMAEVENNLRELLQ DPGIARQIMSMS+
Subjt:  QMAEVENNLRELLQQDPGIARQIMSMSV

A0A6J1D9I1 prefoldin subunit 15.5e-5593.02Show/hide
Query:  MADEANRAIFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIGRTFVLESKSVLMNEQEQKFKDSETAIASLQSSKEYLEK
        MADEANR  FLEIQGRMIE+TGKLKQ+QTQIRNKEGEKKRAFLTLEEL+QLSEDTNAYKSIGRTFVLE KSVLMNEQEQK KDSE AIASLQ+SKEYLEK
Subjt:  MADEANRAIFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIGRTFVLESKSVLMNEQEQKFKDSETAIASLQSSKEYLEK

Query:  QMAEVENNLRELLQQDPGIARQIMSMSVA
        QMAEVENNLRELLQQDPGIARQIMSMSVA
Subjt:  QMAEVENNLRELLQQDPGIARQIMSMSVA

A0A6J1ENI7 prefoldin subunit 1-like6.0e-5491.47Show/hide
Query:  MADEANRAIFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIGRTFVLESKSVLMNEQEQKFKDSETAIASLQSSKEYLEK
        MAD+ANRA FLEIQGRMIEITGKLKQ+QTQIRNKEGEKKRAFLTLEELKQLS+DTNAYKSIGRTFVLE KSVLMNEQEQK KDSE AI SL SSKEYLEK
Subjt:  MADEANRAIFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIGRTFVLESKSVLMNEQEQKFKDSETAIASLQSSKEYLEK

Query:  QMAEVENNLRELLQQDPGIARQIMSMSVA
        Q+AEVENNLRELLQQDPGIARQIMSMS+A
Subjt:  QMAEVENNLRELLQQDPGIARQIMSMSVA

A0A6J1FB94 prefoldin subunit 1-like8.7e-5389.92Show/hide
Query:  MADEANRAIFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIGRTFVLESKSVLMNEQEQKFKDSETAIASLQSSKEYLEK
        MADEANRA FLEIQGRMIEITGKLKQ+Q+Q+RNKEGEKKRAFLTLEELKQLS+DTNAYKSIGR FVLE KSVLM EQEQKFKDSE AI SLQSSKEYLEK
Subjt:  MADEANRAIFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIGRTFVLESKSVLMNEQEQKFKDSETAIASLQSSKEYLEK

Query:  QMAEVENNLRELLQQDPGIARQIMSMSVA
        Q AEVENNL+EL+QQDPGIARQIMSMSVA
Subjt:  QMAEVENNLRELLQQDPGIARQIMSMSVA

SwissProt top hitse value%identityAlignment
O60925 Prefoldin subunit 19.4e-1237.5Show/hide
Query:  FLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIGRTFVLESKSVLMNEQEQKFKDSETAIASLQSSKEYLEKQMAEVENNL
        F E+Q ++I+   K+K    QI      KK A LT  E+  L ++TN Y+ +GR F+L+SK  + ++  +K K +E  I  L+  K YLE+ + E E+N+
Subjt:  FLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIGRTFVLESKSVLMNEQEQKFKDSETAIASLQSSKEYLEKQMAEVENNL

Query:  RELL
        RE+L
Subjt:  RELL

Q3SZE2 Prefoldin subunit 11.9e-1238.46Show/hide
Query:  FLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIGRTFVLESKSVLMNEQEQKFKDSETAIASLQSSKEYLEKQMAEVENNL
        F E+Q ++I+   K+K    QI      KK A LT  E+  L ++TN Y+ +GR F+L+SK  + N+  +K K +E  I  L+  K YLE+ + E E+N+
Subjt:  FLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIGRTFVLESKSVLMNEQEQKFKDSETAIASLQSSKEYLEKQMAEVENNL

Query:  RELL
        RE+L
Subjt:  RELL

Q5D016 Prefoldin subunit 12.3e-1035.58Show/hide
Query:  FLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIGRTFVLESKSVLMNEQEQKFKDSETAIASLQSSKEYLEKQMAEVENNL
        F E+Q +M++   K+K    QI      KK A LT  E+  L E T  ++  GR F+L+SK  + N+  +K K ++  I  L+  K YLE+ + + E+N+
Subjt:  FLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIGRTFVLESKSVLMNEQEQKFKDSETAIASLQSSKEYLEKQMAEVENNL

Query:  RELL
        RE+L
Subjt:  RELL

Q5RAM7 Prefoldin subunit 12.5e-1238.46Show/hide
Query:  FLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIGRTFVLESKSVLMNEQEQKFKDSETAIASLQSSKEYLEKQMAEVENNL
        F E+Q ++I+   K+K    QI      KK A LT  E+  L ++TN Y+ +GR F+L+SK  + N+  +K K +E  I  L+  K YLE+ + E E+N+
Subjt:  FLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIGRTFVLESKSVLMNEQEQKFKDSETAIASLQSSKEYLEKQMAEVENNL

Query:  RELL
        RE+L
Subjt:  RELL

Q9CWM4 Prefoldin subunit 12.5e-1238.46Show/hide
Query:  FLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIGRTFVLESKSVLMNEQEQKFKDSETAIASLQSSKEYLEKQMAEVENNL
        F E+Q ++I+   K+K    QI      KK A LT  E+  L ++TN Y+ +GR F+L+SK V+ N+  +K K ++  I  L+  K YLE+ + E E+N+
Subjt:  FLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIGRTFVLESKSVLMNEQEQKFKDSETAIASLQSSKEYLEKQMAEVENNL

Query:  RELL
        RE+L
Subjt:  RELL

Arabidopsis top hitse value%identityAlignment
AT2G07340.1 PREFOLDIN 17.5e-4978.12Show/hide
Query:  MADEANRAIFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIGRTFVLESKSVLMNEQEQKFKDSETAIASLQSSKEYLEK
        MADEA RA F+EIQ  MIE+TGKLKQ+Q Q+RNKEG++KRAFLTLEEL+ L E+TN YKSIGRTFVLE K+VL  EQEQK KDSE A+ASLQ+SKEYLEK
Subjt:  MADEANRAIFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIGRTFVLESKSVLMNEQEQKFKDSETAIASLQSSKEYLEK

Query:  QMAEVENNLRELLQQDPGIARQIMSMSV
        Q+AEVENNLRELLQQ+PGIA+QIMSMS+
Subjt:  QMAEVENNLRELLQQDPGIARQIMSMSV

AT2G07340.2 PREFOLDIN 11.6e-4676.56Show/hide
Query:  MADEANRAIFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIGRTFVLESKSVLMNEQEQKFKDSETAIASLQSSKEYLEK
        MADEA RA F+EIQ  MIE+TGKLKQ+Q Q+RNKEG++KRAFLTLEEL+ L E+TN YKSIG+ FVLE K+VL  EQEQK KDSE A+ASLQ+SKEYLEK
Subjt:  MADEANRAIFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIGRTFVLESKSVLMNEQEQKFKDSETAIASLQSSKEYLEK

Query:  QMAEVENNLRELLQQDPGIARQIMSMSV
        Q+AEVENNLRELLQQ+PGIA+QIMSMS+
Subjt:  QMAEVENNLRELLQQDPGIARQIMSMSV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGATGAGGCGAACAGAGCTATTTTCTTGGAAATTCAAGGTCGCATGATTGAGATTACTGGAAAGCTGAAGCAGTTGCAGACCCAGATACGAAACAAGGAGGGAGA
GAAGAAGCGTGCTTTTTTAACCTTGGAGGAACTTAAACAGTTGTCTGAAGACACTAATGCATACAAATCTATAGGGAGAACGTTTGTTTTAGAGTCAAAGTCAGTTCTAA
TGAATGAACAGGAGCAAAAGTTCAAGGATAGTGAAACTGCAATTGCCTCGCTCCAGAGCTCAAAGGAGTATTTAGAGAAGCAGATGGCTGAGGTGGAGAACAACTTGAGG
GAGCTGTTGCAACAAGATCCAGGTATAGCTCGCCAGATTATGTCTATGTCTGTAGCATAG
mRNA sequenceShow/hide mRNA sequence
GGTCAGGTCATAGCATGGTTGGAGGACATTTTTTTTTAATAATTAAATTTAACTGTAAATAAATTTTTAAAAACCCGACCCGGTTCATCACACCCTAGACAGTGCAACAA
TTCATATTGGGAATAAGCATCGTTTACGCGAGCTCTGATCTTCGAAATGGCGGATGAGGCGAACAGAGCTATTTTCTTGGAAATTCAAGGTCGCATGATTGAGATTACTG
GAAAGCTGAAGCAGTTGCAGACCCAGATACGAAACAAGGAGGGAGAGAAGAAGCGTGCTTTTTTAACCTTGGAGGAACTTAAACAGTTGTCTGAAGACACTAATGCATAC
AAATCTATAGGGAGAACGTTTGTTTTAGAGTCAAAGTCAGTTCTAATGAATGAACAGGAGCAAAAGTTCAAGGATAGTGAAACTGCAATTGCCTCGCTCCAGAGCTCAAA
GGAGTATTTAGAGAAGCAGATGGCTGAGGTGGAGAACAACTTGAGGGAGCTGTTGCAACAAGATCCAGGTATAGCTCGCCAGATTATGTCTATGTCTGTAGCATAGGGCA
GCCTCTCTCCCCTTGAAATTGACATTAGCTCAGCTTTGTGTATTGAATGTTCTTGTTCTTGGGTCAGAAGAATTTGGCTGGTGTGGTGTTAGTGAGTTGTGATTCTACTT
GGTTGGCTTCTATAGTTTCTGATGCCAAAACTTTGTTTGATATGCAATTCATACTCCCAAGTTCCGAACTCTGTTTTCCTAGTTTGAAGGGTTTGTTTATTTATTTATTT
TTGGTTGATAAGATTGTTTGTAGGTTAAGACATCAAGTAATCTTCTTGGTTGAAACTTCGAAATTGGTTGATCGTGTGCGATTTTGATAAACACCCTAGTGTAAGGTTGG
TTTTTGCATTTTTTTTTTCTATTTTTCAAAAATGAAACTCAATTTATCTCTTAGATTTTTGTAAAGTTTCAAAATGTGAATTTTTCTTACGTAATTATTTTAAATGGCTC
GTAGTGATAGATATTGACAGTGTCTATCAACTGTTATCACTAATAAATCATAACATTTTACTATATTTGTAAATAAGTTAGGTCATTTTGTTATATTTCAAAAGATTTTG
TTCTTTTTGTAGGATGATAAAAAGTCATGATAAATGAGTGATAAATGAATTTTCTCATTACTGGGATTTTTTTTTTTTGGAGTGAGGGGAATCCATTTATGACTTCTAAA
CTTTAGAAATTGAATTAATTAAAACTCCAAATTAGTAATTATATCAATTAAGATGTAAAGTTTTAATGAGCGAAATTCAGACTTGGTATTTATATTTAGTTTCGTTTAAA
ATCATCTAAAAAACATCTAAACAATATATGTAGAGAAAGAAATAAAGAAAAATCATTTATATTCATGTAAGTCGTTATTATTCTTTTGATTAAGGGGTTGTTTGGCGTGG
TAGTATTTGGGGTGTTGAGTTTATATGTCAGAGTTATTTGATGCAATTTTTTTTTTACATAAATAATCTATTTTTGTGGTATATATATATATATATATATATATATATAT
ATTATCAACTATAGATTACACTTTATTTTGTTGTTTTTTAAGCGCACGCGTATTATTGGAAGTTTTGGAAAATGGAGTTTATGGTTTACTTTTGGATTATGCTTTTCAAT
TTATTTATTTATTTATTTAATTTAAGCAATCATTTTATAAATTTGTGCATGTGATGTTTCTAATTGAGTTATTGGGAT
Protein sequenceShow/hide protein sequence
MADEANRAIFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIGRTFVLESKSVLMNEQEQKFKDSETAIASLQSSKEYLEKQMAEVENNLR
ELLQQDPGIARQIMSMSVA