; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC11G218860 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC11G218860
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
Genome locationCicolChr11:21048153..21050628
RNA-Seq ExpressionCcUC11G218860
SyntenyCcUC11G218860
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
OAY70375.1 hypothetical protein ACMD2_03749 [Ananas comosus]1.4e-0662.3Show/hide
Query:  KYISGARGSMENFLQKGTHFLANSAVSDIASKSMAKIDKIVLAVTRGGSFIGSTVLTKMST
        KY SG RGSM    QKGT  LA  AVS  ASKS A+I++ VLAVTRGGS  GS V T  ST
Subjt:  KYISGARGSMENFLQKGTHFLANSAVSDIASKSMAKIDKIVLAVTRGGSFIGSTVLTKMST
TrEMBL top hitse value%identityAlignment
A0A199V0F8 Uncharacterized protein6.8e-0762.3Show/hide
Query:  KYISGARGSMENFLQKGTHFLANSAVSDIASKSMAKIDKIVLAVTRGGSFIGSTVLTKMST
        KY SG RGSM    QKGT  LA  AVS  ASKS A+I++ VLAVTRGGS  GS V T  ST
Subjt:  KYISGARGSMENFLQKGTHFLANSAVSDIASKSMAKIDKIVLAVTRGGSFIGSTVLTKMST
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAAAAGGAACAGACTGAGGTTGGGAGAGAGAGAAACTGGACTGAGCAAGTTACCAAGGCATTCATGGCACCGGCTTTCTTGTGATGCTGGAAACCTGGTC
TTTTCTCACGAGACACATAAACTAGGCGGGGGAGTTCATTTCCTTCTGCATCAAGGCCTCCACTGTGACCCAGAAAGACTTGGATCATACCAGGATGATCTTTTG
TGTTGTTGCCTGGCCACGAAGTACATTTCAGGTGCTCGTGGTTCTATGGAGAACTTCTTACAAAAAGGCACCCATTTCCTCGCAAATTCTGCAGTTTCAGACATT
GCTTCAAAGTCCATGGCCAAGATAGATAAGATTGTGTTAGCTGTTACAAGAGGAGGTTCCTTCATCGGATCTACAGTACTGACAAAGATGTCGACCGGAGCAAGC
AAATTAGGGATAGACGATCCAAGTAGGTTTCACGATCGATTGGGAACCATTTGGGGAACTGATCGAGGATCCATGAAAATGCAAACCAGATTTCGCATATCACAG
AAGTTAGCCACAAGCCCAATGCGTCATGCACTGGATTTAGAATCCGGCGAGAATAACGAGCCGGGCTACAATAACCATCCGGGTCATTGGCATCATCAGGTTCAG
GCCCAAGATTGCCTTGCTGCAATTTCCAATCATCCATTCTATCTTTCCAACCTTCCTCTTTCTTTTCATCCCATCTTGTACTCCCTGAAACTGGATATGGATGTA
CACGTTTGTGCAATGAAGAAGATAACATCTGCTCTCCATAACCTTGAGAAGATAAAGGAAGCTCACCATTTGCCTGCATATGTAGATAATAAAAGTTTTGCTGAC
ACTCACTGTCTGTGTTCTTCCGTATTGTGCATTTTCTTCATCATCTGGGCCTCTACCATAGCTCATCTTGCCATGAAGCATAGCTTCTGCCAGATGACTATGGTT
GTTCCTCTCATCATCATCAATGTTGAACTCATGTTCAATGTCATCTATGTCTTCTTCATCATCATCTCCCTCAACCCTCGGACTCCCTTCACAATATCCAAAAAG
ATATCCTTTGTTCTGTGCTTCACCTTTGAGTCTCTTATATCTAGTTTTACACTGAGGACAATTTTGGCTTCCTTCTCTTCTTTCATACTCATAGCAAGGTCTGCA
AACTGGAAAACCACATTCATTGCAGGCAACAAACAGATCACCATCCACAGTAAGCCCCACTTCGTCACCACAGATCTCACAAACTTGACCGTCCAAATTCTTCAA
CGGTTTTGGCTGCAGAAGAGAAAACATAACAAAACAAAAACAACCATATCAGCCACAAACACACACCAAAAATTTCTCCCACTGCACTTTCTGATTAAGTTCATC
ACCTCCTCATGGCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGAAAAGGAACAGACTGAGGTTGGGAGAGAGAGAAACTGGACTGAGCAAGTTACCAAGGCATTCATGGCACCGGCTTTCTTGTGATGCTGGAAACCTGGTC
TTTTCTCACGAGACACATAAACTAGGCGGGGGAGTTCATTTCCTTCTGCATCAAGGCCTCCACTGTGACCCAGAAAGACTTGGATCATACCAGGATGATCTTTTG
TGTTGTTGCCTGGCCACGAAGTACATTTCAGGTGCTCGTGGTTCTATGGAGAACTTCTTACAAAAAGGCACCCATTTCCTCGCAAATTCTGCAGTTTCAGACATT
GCTTCAAAGTCCATGGCCAAGATAGATAAGATTGTGTTAGCTGTTACAAGAGGAGGTTCCTTCATCGGATCTACAGTACTGACAAAGATGTCGACCGGAGCAAGC
AAATTAGGGATAGACGATCCAAGTAGGTTTCACGATCGATTGGGAACCATTTGGGGAACTGATCGAGGATCCATGAAAATGCAAACCAGATTTCGCATATCACAG
AAGTTAGCCACAAGCCCAATGCGTCATGCACTGGATTTAGAATCCGGCGAGAATAACGAGCCGGGCTACAATAACCATCCGGGTCATTGGCATCATCAGGTTCAG
GCCCAAGATTGCCTTGCTGCAATTTCCAATCATCCATTCTATCTTTCCAACCTTCCTCTTTCTTTTCATCCCATCTTGTACTCCCTGAAACTGGATATGGATGTA
CACGTTTGTGCAATGAAGAAGATAACATCTGCTCTCCATAACCTTGAGAAGATAAAGGAAGCTCACCATTTGCCTGCATATGTAGATAATAAAAGTTTTGCTGAC
ACTCACTGTCTGTGTTCTTCCGTATTGTGCATTTTCTTCATCATCTGGGCCTCTACCATAGCTCATCTTGCCATGAAGCATAGCTTCTGCCAGATGACTATGGTT
GTTCCTCTCATCATCATCAATGTTGAACTCATGTTCAATGTCATCTATGTCTTCTTCATCATCATCTCCCTCAACCCTCGGACTCCCTTCACAATATCCAAAAAG
ATATCCTTTGTTCTGTGCTTCACCTTTGAGTCTCTTATATCTAGTTTTACACTGAGGACAATTTTGGCTTCCTTCTCTTCTTTCATACTCATAGCAAGGTCTGCA
AACTGGAAAACCACATTCATTGCAGGCAACAAACAGATCACCATCCACAGTAAGCCCCACTTCGTCACCACAGATCTCACAAACTTGACCGTCCAAATTCTTCAA
CGGTTTTGGCTGCAGAAGAGAAAACATAACAAAACAAAAACAACCATATCAGCCACAAACACACACCAAAAATTTCTCCCACTGCACTTTCTGATTAAGTTCATC
ACCTCCTCATGGCCATGA
Protein sequenceShow/hide protein sequence
MGKRNRLRLGERETGLSKLPRHSWHRLSCDAGNLVFSHETHKLGGGVHFLLHQGLHCDPERLGSYQDDLLCCCLATKYISGARGSMENFLQKGTHFLANSAVSDI
ASKSMAKIDKIVLAVTRGGSFIGSTVLTKMSTGASKLGIDDPSRFHDRLGTIWGTDRGSMKMQTRFRISQKLATSPMRHALDLESGENNEPGYNNHPGHWHHQVQ
AQDCLAAISNHPFYLSNLPLSFHPILYSLKLDMDVHVCAMKKITSALHNLEKIKEAHHLPAYVDNKSFADTHCLCSSVLCIFFIIWASTIAHLAMKHSFCQMTMV
VPLIIINVELMFNVIYVFFIIISLNPRTPFTISKKISFVLCFTFESLISSFTLRTILASFSSFILIARSANWKTTFIAGNKQITIHSKPHFVTTDLTNLTVQILQ
RFWLQKRKHNKTKTTISATNTHQKFLPLHFLIKFITSSWP