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CcUC11G219630 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC11G219630
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionAuxin-responsive protein
Genome locationCicolChr11:23398398..23401457
RNA-Seq ExpressionCcUC11G219630
SyntenyCcUC11G219630
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009734 - auxin-activated signaling pathway (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR000270 - PB1 domain
IPR003311 - AUX/IAA protein
IPR033389 - AUX/IAA domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586078.1 Auxin-responsive protein IAA33, partial [Cucurbita argyrosperma subsp. sororia]5.3e-6480.95Show/hide
Query:  MNAFQSRTTQSPAAAAAAAAEYFKMRRWPE------------RRLAEGEGEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD--
        MN F S  TQSPAAAAAAAAEYFKMRRWPE            +R+ E E EEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD  
Subjt:  MNAFQSRTTQSPAAAAAAAAEYFKMRRWPE------------RRLAEGEGEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD--

Query:  ---GGGGENSGERRLDLTNAVPGHIVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN
           GGGGE SG+R+LDL NAVPGH+VAYEDIENDLLLAGDLNWNDFVRVAKRIRILP+KANSRRGRGN
Subjt:  ---GGGGENSGERRLDLTNAVPGHIVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN

XP_022938283.1 auxin-responsive protein IAA33 [Cucurbita moschata]5.2e-5976.61Show/hide
Query:  MNAFQSRTTQSPAAAAAAAAEYFKMRRWPERRLA---------------EGEGEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDD
        MN F S  TQSP    AAAAEYFKMRRWPE +L                E E EEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDD
Subjt:  MNAFQSRTTQSPAAAAAAAAEYFKMRRWPERRLA---------------EGEGEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDD

Query:  D-----GGGGENSGERRLDLTNAVPGHIVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN
        D     GGGGE S +R+LDL NAVPGH+VAYEDIENDLLLAGDLNWNDFVRVAKRIRILP+KANSRRGRGN
Subjt:  D-----GGGGENSGERRLDLTNAVPGHIVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN

XP_022969694.1 auxin-responsive protein IAA33 [Cucurbita maxima]3.6e-6079.52Show/hide
Query:  MNAFQSRTTQSPAAAAAAAAEYFKMRRWPERRLA----------EGEGEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD----
        MN F S  TQSP  AAAAAAEYFKMRRWPE +L           + E EEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD    
Subjt:  MNAFQSRTTQSPAAAAAAAAEYFKMRRWPERRLA----------EGEGEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD----

Query:  -GGGGENSGERRLDLTNAVPGHIVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN
         GGGGE SG+R+LDL NAVPGH+VAYEDIENDLLLAGDLNWNDFVRVAKRIRILP+KANSRR RGN
Subjt:  -GGGGENSGERRLDLTNAVPGHIVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN

XP_023538318.1 auxin-responsive protein IAA33 [Cucurbita pepo subsp. pepo]3.1e-6483.95Show/hide
Query:  MNAFQSRTTQSPAAAAAAAAEYFKMRRWPERRLA-----------EGEGEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGG
        MN F S  TQSP AAAAAAAEYFKMRRWPE +L            E E EEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGG
Subjt:  MNAFQSRTTQSPAAAAAAAAEYFKMRRWPERRLA-----------EGEGEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGG

Query:  GENSGERRLDLTNAVPGHIVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN
        GE SGER+LDL NAVPGH+VAYEDIENDLLLAGDLNWNDFVRVAKRIRILP+KANSRRGRGN
Subjt:  GENSGERRLDLTNAVPGHIVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN

XP_038890972.1 auxin-responsive protein IAA33 [Benincasa hispida]1.1e-6991.14Show/hide
Query:  MNAFQSRTTQSPAAAAAAAAEYFKMRRWPERRL-----AEGEGEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD--GGGGENS
        MNAFQSRTTQSP  AAAAAAE FKMRRWPERR+     AEGEGEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDD+D  GGGGENS
Subjt:  MNAFQSRTTQSPAAAAAAAAEYFKMRRWPERRL-----AEGEGEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD--GGGGENS

Query:  GERRLDLTNAVPGHIVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN
        GER+LDLTNAVPGHIVAYEDIENDLLLAGDLNWNDFVRVAKRIRI+PVKANSRRGRGN
Subjt:  GERRLDLTNAVPGHIVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN

TrEMBL top hitse value%identityAlignment
A0A0A0LH98 Auxin-responsive protein4.7e-5886.11Show/hide
Query:  TQSPAAAAAAAAEYFKMRRWPERRLA-EGEGEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGGGENSGERRLDLTNAVPGH
        TQSP  AAAAAAEYFKM RW +RR++   + EEDFAAVIPPVTVVLEGRAICQRISLHKH SYESLAKALRRMFVDDDD   GE+SGER LDLTNAVPG+
Subjt:  TQSPAAAAAAAAEYFKMRRWPERRLA-EGEGEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGGGENSGERRLDLTNAVPGH

Query:  IVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN
        IVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGR N
Subjt:  IVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN

A0A1S3BRI6 Auxin-responsive protein2.1e-5886.81Show/hide
Query:  TQSPAAAAAAAAEYFKMRRWPERRLA-EGEGEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGGGENSGERRLDLTNAVPGH
        TQSP  AAAAAAEYFKM RW ERR+    + EEDF+AVIPPVTVVLEGRAICQRISLHKH SYESLAKALRRMFVDDDD   GE SGERRLDLTNAVPG+
Subjt:  TQSPAAAAAAAAEYFKMRRWPERRLA-EGEGEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGGGENSGERRLDLTNAVPGH

Query:  IVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN
        IVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGR N
Subjt:  IVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN

A0A6J1DKE3 Auxin-responsive protein4.9e-5585.82Show/hide
Query:  AAAEYFKMRRWPERRLAEGEGEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGGGEN-SGERRLDLTNAVPGHIVAYEDIEN
        AAAEY K RRWPERR      EED +AVIP VTVVLEGRAICQRISLHKHASYESLAKALR MFV +DDGGGG++ SGERRLDL+NAVPGH+VAYEDIEN
Subjt:  AAAEYFKMRRWPERRLAEGEGEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGGGEN-SGERRLDLTNAVPGHIVAYEDIEN

Query:  DLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRG
        DLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRG
Subjt:  DLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRG

A0A6J1FIF6 Auxin-responsive protein2.5e-5976.61Show/hide
Query:  MNAFQSRTTQSPAAAAAAAAEYFKMRRWPERRLA---------------EGEGEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDD
        MN F S  TQSP    AAAAEYFKMRRWPE +L                E E EEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDD
Subjt:  MNAFQSRTTQSPAAAAAAAAEYFKMRRWPERRLA---------------EGEGEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDD

Query:  D-----GGGGENSGERRLDLTNAVPGHIVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN
        D     GGGGE S +R+LDL NAVPGH+VAYEDIENDLLLAGDLNWNDFVRVAKRIRILP+KANSRRGRGN
Subjt:  D-----GGGGENSGERRLDLTNAVPGHIVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN

A0A6J1I3D9 Auxin-responsive protein1.7e-6079.52Show/hide
Query:  MNAFQSRTTQSPAAAAAAAAEYFKMRRWPERRLA----------EGEGEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD----
        MN F S  TQSP  AAAAAAEYFKMRRWPE +L           + E EEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD    
Subjt:  MNAFQSRTTQSPAAAAAAAAEYFKMRRWPERRLA----------EGEGEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD----

Query:  -GGGGENSGERRLDLTNAVPGHIVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN
         GGGGE SG+R+LDL NAVPGH+VAYEDIENDLLLAGDLNWNDFVRVAKRIRILP+KANSRR RGN
Subjt:  -GGGGENSGERRLDLTNAVPGHIVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN

SwissProt top hitse value%identityAlignment
A2WTQ5 Auxin-responsive protein IAA57.4e-0828.87Show/hide
Query:  SPAAAAAAAAEYFKMRRWPERRLA----EGEGEEDFAAVIPP--VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGGGENSGERRLDLTNAV
        +P AA A    +  +R + +  LA    +G+GE+   A   P  V V ++G    +++ L  ++SYE L+ AL +MF     G  G      R  LTN  
Subjt:  SPAAAAAAAAEYFKMRRWPERRLA----EGEGEEDFAAVIPP--VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGGGENSGERRLDLTNAV

Query:  PG-------HIVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL
                 +++ YED + D +L GDL W+ F  + ++++I+
Subjt:  PG-------HIVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL

Q38831 Auxin-responsive protein IAA131.5e-0834.78Show/hide
Query:  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGGGENSG-ERRLDLTNAVPGHIVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL
        + V ++G AI +++ L+ H+SYE+LA+ L  MF   + G  G  S   + L L +     ++ YED E D +L GD+ W  F+   KR+R++
Subjt:  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGGGENSG-ERRLDLTNAVPGHIVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL

Q69VE0 Auxin-responsive protein IAA235.1e-0929.45Show/hide
Query:  SRTTQSPAAAAAAAAEYFKMR---------RWPERRLAEGEGEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVD---DDDGGGGENS
        S +T  P    AA A++   +          WP  R        + +A    V V ++G    +++ L  HA Y  L +AL  MF        GGGG+  
Subjt:  SRTTQSPAAAAAAAAEYFKMR---------RWPERRLAEGEGEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVD---DDDGGGGENS

Query:  GERRLDLTNAVPGHIVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL
        G + +DL      ++  YED + D +L GD+ W  FV   KRIR++
Subjt:  GERRLDLTNAVPGHIVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL

Q6K846 Auxin-responsive protein IAA92.1e-1039.78Show/hide
Query:  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGGGENSGERRL--DLTNAVPGHIVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL
        V V  EG AI +++ L  H+SY+ LA  L RMF  +D      + GE+++  D      G +V YED + D +L GD+ W+DF R  KR++IL
Subjt:  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGGGENSGERRL--DLTNAVPGHIVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL

Q9FKM7 Auxin-responsive protein IAA331.1e-3566.67Show/hide
Query:  EEDF-AAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGGGENSGERRLDLTNAVPGHIVAYEDIENDLLLAGDLNWNDFVRVAKRIR
        E+D  ++V+PPVTVVLEGR+ICQRISL KH SY+SLA ALR+MFVD     G +++ +  LDL+NA+PGH++AYED+ENDLLLAGDL W DFVRVAKRIR
Subjt:  EEDF-AAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGGGENSGERRLDLTNAVPGHIVAYEDIENDLLLAGDLNWNDFVRVAKRIR

Query:  ILPVKANSRRGRGN
        ILPVK N+R+ + N
Subjt:  ILPVKANSRRGRGN

Arabidopsis top hitse value%identityAlignment
AT1G04550.2 AUX/IAA transcriptional regulator family protein8.9e-0929.41Show/hide
Query:  ERRLAEGEGEEDFAAVIPP-------VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGGGENSGE--RRLDLTNAVPGHIVAYEDIENDLLL
        E+++ + +  +D +  + P       V V ++G  I +++ +  H+SYE+LA+ L  MF     G  G    E  + L L +     ++ YED E D +L
Subjt:  ERRLAEGEGEEDFAAVIPP-------VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGGGENSGE--RRLDLTNAVPGHIVAYEDIENDLLL

Query:  AGDLNWNDFVRVAKRIRIL
         GD+ W  F+   KR+RI+
Subjt:  AGDLNWNDFVRVAKRIRIL

AT2G33310.1 auxin-induced protein 131.1e-0934.78Show/hide
Query:  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGGGENSG-ERRLDLTNAVPGHIVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL
        + V ++G AI +++ L+ H+SYE+LA+ L  MF   + G  G  S   + L L +     ++ YED E D +L GD+ W  F+   KR+R++
Subjt:  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGGGENSG-ERRLDLTNAVPGHIVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL

AT2G33310.2 auxin-induced protein 131.1e-0934.78Show/hide
Query:  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGGGENSG-ERRLDLTNAVPGHIVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL
        + V ++G AI +++ L+ H+SYE+LA+ L  MF   + G  G  S   + L L +     ++ YED E D +L GD+ W  F+   KR+R++
Subjt:  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGGGENSG-ERRLDLTNAVPGHIVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL

AT2G33310.3 auxin-induced protein 131.1e-0934.78Show/hide
Query:  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGGGENSG-ERRLDLTNAVPGHIVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL
        + V ++G AI +++ L+ H+SYE+LA+ L  MF   + G  G  S   + L L +     ++ YED E D +L GD+ W  F+   KR+R++
Subjt:  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGGGENSG-ERRLDLTNAVPGHIVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL

AT5G57420.1 indole-3-acetic acid inducible 337.7e-3766.67Show/hide
Query:  EEDF-AAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGGGENSGERRLDLTNAVPGHIVAYEDIENDLLLAGDLNWNDFVRVAKRIR
        E+D  ++V+PPVTVVLEGR+ICQRISL KH SY+SLA ALR+MFVD     G +++ +  LDL+NA+PGH++AYED+ENDLLLAGDL W DFVRVAKRIR
Subjt:  EEDF-AAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGGGENSGERRLDLTNAVPGHIVAYEDIENDLLLAGDLNWNDFVRVAKRIR

Query:  ILPVKANSRRGRGN
        ILPVK N+R+ + N
Subjt:  ILPVKANSRRGRGN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGCCTTCCAGTCTCGAACAACACAATCCCCTGCTGCTGCTGCCGCCGCCGCTGCAGAGTATTTCAAGATGAGGCGGTGGCCGGAGAGGAGACTGGCTGAGGGGGA
GGGGGAGGAGGATTTTGCGGCGGTGATTCCGCCGGTGACGGTGGTGCTGGAAGGGAGGGCGATCTGTCAGCGGATCAGCCTCCACAAACATGCAAGCTATGAGAGCCTAG
CGAAGGCTCTGAGAAGGATGTTCGTCGACGATGACGACGGCGGCGGTGGTGAAAACTCCGGCGAGCGGCGGCTGGATTTGACGAACGCGGTTCCGGGTCATATTGTTGCT
TATGAAGATATTGAAAATGATCTTCTTCTTGCTGGTGATCTCAATTGGAATGATTTTGTGCGGGTGGCGAAGAGAATTCGAATACTGCCAGTAAAAGCAAATTCAAGGAG
GGGAAGAGGAAATTAA
mRNA sequenceShow/hide mRNA sequence
CATTTTTCTTCACCAAACAAACAAACCCAATTCTTTCTTTTCTCTCTCTAAATCTGATGAATGCCTTCCAGTCTCGAACAACACAATCCCCTGCTGCTGCTGCCGCCGCC
GCTGCAGAGTATTTCAAGATGAGGCGGTGGCCGGAGAGGAGACTGGCTGAGGGGGAGGGGGAGGAGGATTTTGCGGCGGTGATTCCGCCGGTGACGGTGGTGCTGGAAGG
GAGGGCGATCTGTCAGCGGATCAGCCTCCACAAACATGCAAGCTATGAGAGCCTAGCGAAGGCTCTGAGAAGGATGTTCGTCGACGATGACGACGGCGGCGGTGGTGAAA
ACTCCGGCGAGCGGCGGCTGGATTTGACGAACGCGGTTCCGGGTCATATTGTTGCTTATGAAGATATTGAAAATGATCTTCTTCTTGCTGGTGATCTCAATTGGAATGAT
TTTGTGCGGGTGGCGAAGAGAATTCGAATACTGCCAGTAAAAGCAAATTCAAGGAGGGGAAGAGGAAATTAAATTAATATATGTGTTAAATATATATTTTATGGGAGCCA
TTTGTATTAATTAATATTATCTTATAATTATGATTTCTTTCAAAAAAAGAAGAAAAAAGAAAAAAGAAAGAAATAATAAGATTTTCCCTTTTGTTTAATGTTATTGAATG
CTCCCATCTGTGTTCACTCTAATCAAAATATTAAAACCAACTTCTAAG
Protein sequenceShow/hide protein sequence
MNAFQSRTTQSPAAAAAAAAEYFKMRRWPERRLAEGEGEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGGGENSGERRLDLTNAVPGHIVA
YEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN