CuGenDBv2

Gene ID	CcUC11G220150
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	S-adenosyl-l-methionine decarboxylase leader peptide
Genome location	CicolChr11:24595985..24601053
RNA-Seq Expression	CcUC11G220150
Synteny	CcUC11G220150
Gene Ontology terms	GO:0006557 - S-adenosylmethioninamine biosynthetic process (biological process) GO:0006597 - spermine biosynthetic process (biological process) GO:0008295 - spermidine biosynthetic process (biological process) GO:0004014 - adenosylmethionine decarboxylase activity (molecular function)
InterPro domains	IPR012511 - S-adenosyl-l-methionine decarboxylase leader peptide

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6586035.1 hypothetical protein SDJN03_18768, partial [Cucurbita argyrosperma subsp. sororia]

2.8e-21

90.48

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Query:  RRSVDVVMEAKGGKKKSSSSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
        RRSV+VVMEAK G KKS S SS SSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
Subjt:  RRSVDVVMEAKGGKKKSSSSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS

KAG6599133.1 hypothetical protein SDJN03_08911, partial [Cucurbita argyrosperma subsp. sororia]

3.9e-31

93.75

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Query:  KFLVLLYIYSAIDEDFRRSVDVVMEAKGGKKKSSSSS-SKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
        +FLV LYIYSAIDEDFRRSVDVVMEAKGGKKKSSSSS SKSSKRQQYEAPLGYIIEDVRPHGGI+KFRSAAYSNC+RKPS
Subjt:  KFLVLLYIYSAIDEDFRRSVDVVMEAKGGKKKSSSSS-SKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS

KAG7030075.1 hypothetical protein SDJN02_08422, partial [Cucurbita argyrosperma subsp. argyrosperma]

5.2e-23

95.31

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Query:  RRSVDVVMEAKGGKKKSSSSS-SKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
        RRSVDVVMEAKGGKKKSSSSS SKSSKRQQYEAPLGYIIEDVRPHGGI+KFRSAAYSNC+RKPS
Subjt:  RRSVDVVMEAKGGKKKSSSSS-SKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS

TYJ96391.1 S-adenosylmethionine decarboxylase proenzyme-like [Cucumis melo var. makuwa]

2.7e-24

96.83

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Query:  RRSVDVVMEAKGGKKKSSSSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
        RRSVDVVME KGGKKKS+SSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
Subjt:  RRSVDVVMEAKGGKKKSSSSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS

XP_038890197.1 S-adenosylmethionine decarboxylase proenzyme-like [Benincasa hispida]

1.4e-33

93.98

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Query:  KFAEKFLVLLYIYSAIDEDFRRSVDVVMEAKGGKKKSSSSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
        KFAEKFLVL YIY AIDEDFRRSVDVVM+ +GGKKKSSSSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
Subjt:  KFAEKFLVLLYIYSAIDEDFRRSVDVVMEAKGGKKKSSSSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LM83 Uncharacterized protein

7.5e-20

96.49

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Query:  MEAKGGKKKS-SSSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
        ME KGGKKKS SSSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
Subjt:  MEAKGGKKKS-SSSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS

A0A1S3BUN9 Adenosylmethionine decarboxylase

6.8e-21

96.43

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Query:  MEAKGGKKKSSSSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
        ME KGGKKKS+SSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
Subjt:  MEAKGGKKKSSSSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS

A0A4S8JYX5 Uncharacterized protein

1.3e-16

77.78

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Query:  RRSVDVVMEAKGGKKKSSSSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
        R SVD +ME+KGGKKKSSSSSS      QYEAPLGY IED+RPHGGI+KF+SAAYSNCVRKPS
Subjt:  RRSVDVVMEAKGGKKKSSSSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS

A0A5D3BCP3 S-adenosylmethionine decarboxylase proenzyme-like

1.3e-24

96.83

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Query:  RRSVDVVMEAKGGKKKSSSSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
        RRSVDVVME KGGKKKS+SSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
Subjt:  RRSVDVVMEAKGGKKKSSSSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS

A5BJ64 Reverse transcriptase Ty1/copia-type domain-containing protein

1.2e-17

83.87

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Query:  RSVDVVMEAKGGKKKSSSSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
        +SVDVVME KGGKKKSSSSSS      QYE PLGYIIEDVRP+GGIEKFRSAAYSNCVRKPS
Subjt:  RSVDVVMEAKGGKKKSSSSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G02468.1 conserved peptide upstream open reading frame 9

7.2e-15

68.42

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Query:  VMEAKGGKKKSSSSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
        +ME+KGGKKKSSSSSS       YEAPLGY IEDVRP+GGI+KF+S+ YSNC ++PS
Subjt:  VMEAKGGKKKSSSSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS

AT3G25572.1 conserved peptide upstream open reading frame 11

1.0e-13

71.43

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Query:  MEAKGGKKKSSSSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
        ME KGGKKKSS+SSS+ S    +EAPL Y IEDVRP+GGI+KFRSAAYSN   KPS
Subjt:  MEAKGGKKKSSSSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS

AT5G15948.1 conserved peptide upstream open reading frame 10

4.0e-13

64.29

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Query:  MEAKGGKKKSSSSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
        ME+K G KKSSS+SS       YEAPLGY IEDVRP GGI+KF+S+ YSNC ++PS
Subjt:  MEAKGGKKKSSSSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS

Sequences

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CDS sequence

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ATGAGTCTTGTTGATGATTTGAAGCTCCACAAAACGACCCAACAATTTATAAAATTTGCCGAGAAATTCCTGGTTCTTCTCTATATTTATTCCGCCATTGACGAAGATTT
TAGAAGAAGCGTGGATGTTGTAATGGAGGCTAAAGGCGGTAAGAAGAAATCTAGCAGTAGTAGCAGCAAGAGTAGTAAAAGGCAACAATACGAAGCTCCGCTCGGATACA
TTATTGAAGACGTTCGTCCCCACGGTGGCATTGAGAAGTTCCGTTCTGCTGCGTATTCCAACTGCGTGAGGAAGCCATCCTGA

mRNA sequence

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Protein sequence

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MSLVDDLKLHKTTQQFIKFAEKFLVLLYIYSAIDEDFRRSVDVVMEAKGGKKKSSSSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS

CcUC11G220150 (gene) of Watermelon (PI 537277) v1 genome