; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC11G220200 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC11G220200
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionG-patch domain-containing protein
Genome locationCicolChr11:24655378..24661011
RNA-Seq ExpressionCcUC11G220200
SyntenyCcUC11G220200
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR000467 - G-patch domain
IPR039146 - G patch domain and ankyrin repeat-containing protein 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573761.1 hypothetical protein SDJN03_27648, partial [Cucurbita argyrosperma subsp. sororia]2.4e-5186.92Show/hide
Query:  TGGRMDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNRRGLGADKVKKKLKETTDTKASDKKNNQERPPPKKAKGLSK
        TGGRMDLESGSGGSVSA AIDSSNIGFQLLKKHGWREGTGLG++EQGRLEPVQ SVKNN+RGLGADKVKKKL+ETTD  ASD K NQERPP KKAK +SK
Subjt:  TGGRMDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNRRGLGADKVKKKLKETTDTKASDKKNNQERPPPKKAKGLSK

Query:  RMRKMEEEERLFQEKEFERAFFREFWPENV
        +MRKM EEERLF+EKEFERAFFREFWP+NV
Subjt:  RMRKMEEEERLFQEKEFERAFFREFWPENV

XP_004147099.1 G patch domain and ankyrin repeat-containing protein 1 homolog [Cucumis sativus]5.2e-5490.48Show/hide
Query:  MDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNRRGLGADKVKKKLKETTDTKASDKKNNQERPPPKKAKGLSKRMRK
        MDLESG GGSVSAAAIDSSNIGF+LLKKHGWREGTGLGV+EQGRLEPVQASVKNN+RGLGADKVKKK+KETTD   SD+KNNQERPPPKKAKGL+KRMRK
Subjt:  MDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNRRGLGADKVKKKLKETTDTKASDKKNNQERPPPKKAKGLSKRMRK

Query:  MEEEERLFQEKEFERAFFREFWPENV
        M+EEERLFQEKEFE+AFFREFWPENV
Subjt:  MEEEERLFQEKEFERAFFREFWPENV

XP_008445906.1 PREDICTED: G patch domain and ankyrin repeat-containing protein 1 homolog isoform X2 [Cucumis melo]1.4e-5492.06Show/hide
Query:  MDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNRRGLGADKVKKKLKETTDTKASDKKNNQERPPPKKAKGLSKRMRK
        MDLESG GGSVSAAAIDSSNIGFQLLKKHGWREGTGLGV+EQGRLEPVQASVKNN+RGLGADKVKKK+KET D  ASD+KNNQERPPPKK KGLSKRMRK
Subjt:  MDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNRRGLGADKVKKKLKETTDTKASDKKNNQERPPPKKAKGLSKRMRK

Query:  MEEEERLFQEKEFERAFFREFWPENV
        M+EEERLFQEKEFERAFFREFWPENV
Subjt:  MEEEERLFQEKEFERAFFREFWPENV

XP_016900186.1 PREDICTED: G patch domain and ankyrin repeat-containing protein 1 homolog isoform X1 [Cucumis melo]1.6e-5591.47Show/hide
Query:  GGRMDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNRRGLGADKVKKKLKETTDTKASDKKNNQERPPPKKAKGLSKR
        GG MDLESG GGSVSAAAIDSSNIGFQLLKKHGWREGTGLGV+EQGRLEPVQASVKNN+RGLGADKVKKK+KET D  ASD+KNNQERPPPKK KGLSKR
Subjt:  GGRMDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNRRGLGADKVKKKLKETTDTKASDKKNNQERPPPKKAKGLSKR

Query:  MRKMEEEERLFQEKEFERAFFREFWPENV
        MRKM+EEERLFQEKEFERAFFREFWPENV
Subjt:  MRKMEEEERLFQEKEFERAFFREFWPENV

XP_038891672.1 protein PXR1 [Benincasa hispida]1.7e-5288.55Show/hide
Query:  STGGRMDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNRRGLGADKVKKKLKETTDTKASDKKNNQERPPPKKAKGLS
        +TGGRMDLE GSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGV+EQGRLEPVQAS+KNN+RGLGADKVKKKLKETTD  ASD+KNNQ      KAKGLS
Subjt:  STGGRMDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNRRGLGADKVKKKLKETTDTKASDKKNNQERPPPKKAKGLS

Query:  KRMRKMEEEERLFQEKEFERAFFREFWPENV
        KRMRKM+EEERLFQEKEFERAFFREFWPENV
Subjt:  KRMRKMEEEERLFQEKEFERAFFREFWPENV

TrEMBL top hitse value%identityAlignment
A0A0A0KPR8 G-patch domain-containing protein2.5e-5490.48Show/hide
Query:  MDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNRRGLGADKVKKKLKETTDTKASDKKNNQERPPPKKAKGLSKRMRK
        MDLESG GGSVSAAAIDSSNIGF+LLKKHGWREGTGLGV+EQGRLEPVQASVKNN+RGLGADKVKKK+KETTD   SD+KNNQERPPPKKAKGL+KRMRK
Subjt:  MDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNRRGLGADKVKKKLKETTDTKASDKKNNQERPPPKKAKGLSKRMRK

Query:  MEEEERLFQEKEFERAFFREFWPENV
        M+EEERLFQEKEFE+AFFREFWPENV
Subjt:  MEEEERLFQEKEFERAFFREFWPENV

A0A1S3BEH2 G patch domain and ankyrin repeat-containing protein 1 homolog isoform X26.6e-5592.06Show/hide
Query:  MDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNRRGLGADKVKKKLKETTDTKASDKKNNQERPPPKKAKGLSKRMRK
        MDLESG GGSVSAAAIDSSNIGFQLLKKHGWREGTGLGV+EQGRLEPVQASVKNN+RGLGADKVKKK+KET D  ASD+KNNQERPPPKK KGLSKRMRK
Subjt:  MDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNRRGLGADKVKKKLKETTDTKASDKKNNQERPPPKKAKGLSKRMRK

Query:  MEEEERLFQEKEFERAFFREFWPENV
        M+EEERLFQEKEFERAFFREFWPENV
Subjt:  MEEEERLFQEKEFERAFFREFWPENV

A0A1S4DW19 G patch domain and ankyrin repeat-containing protein 1 homolog isoform X17.8e-5691.47Show/hide
Query:  GGRMDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNRRGLGADKVKKKLKETTDTKASDKKNNQERPPPKKAKGLSKR
        GG MDLESG GGSVSAAAIDSSNIGFQLLKKHGWREGTGLGV+EQGRLEPVQASVKNN+RGLGADKVKKK+KET D  ASD+KNNQERPPPKK KGLSKR
Subjt:  GGRMDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNRRGLGADKVKKKLKETTDTKASDKKNNQERPPPKKAKGLSKR

Query:  MRKMEEEERLFQEKEFERAFFREFWPENV
        MRKM+EEERLFQEKEFERAFFREFWPENV
Subjt:  MRKMEEEERLFQEKEFERAFFREFWPENV

A0A6J1CAQ8 G patch domain and ankyrin repeat-containing protein 1 homolog7.8e-4882.54Show/hide
Query:  MDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNRRGLGADKVKKKLKETTDTKASDKKNNQERPPPKKAKGLSKRMRK
        M+ ES SGG+VSA AIDSSNIGFQLLKKHGWREGTGLGV+EQGRLEPVQ SVKNN+RGLGADKVKKKLKET D  ASD+KNNQE PP KK K LSK  RK
Subjt:  MDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNRRGLGADKVKKKLKETTDTKASDKKNNQERPPPKKAKGLSKRMRK

Query:  MEEEERLFQEKEFERAFFREFWPENV
        M+EE+R+FQEKEFERAFFREFWP+NV
Subjt:  MEEEERLFQEKEFERAFFREFWPENV

A0A6J1G054 G patch domain and ankyrin repeat-containing protein 1 homolog8.4e-5087.3Show/hide
Query:  MDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNRRGLGADKVKKKLKETTDTKASDKKNNQERPPPKKAKGLSKRMRK
        MDLESGSGGSVSA AIDSSNIGFQLLKKHGWREGTGLG++EQGRLEPVQ SVKNN+RGLGADKVKKKLKETTD  ASD K NQERPP KKAK +SK+MRK
Subjt:  MDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNRRGLGADKVKKKLKETTDTKASDKKNNQERPPPKKAKGLSKRMRK

Query:  MEEEERLFQEKEFERAFFREFWPENV
        M EEERLF+EKEFERAFFREFWP+NV
Subjt:  MEEEERLFQEKEFERAFFREFWPENV

SwissProt top hitse value%identityAlignment
A0JMV4 RNA-binding protein 5-A1.2e-0552.17Show/hide
Query:  IDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNRRGLGA
        ID+SNIG ++L+  GW+EG+GLG   QG   P+QA V+    GLGA
Subjt:  IDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNRRGLGA

A2A6A1 G patch domain-containing protein 81.2e-0551.11Show/hide
Query:  IDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNRRGLG
        I+S NIG +LL+KHGW+ G GLG + QGR +P+   VK +  G+G
Subjt:  IDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNRRGLG

F4JCU0 SUPPRESSOR OF ABI3-59.3e-0649.02Show/hide
Query:  AIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNRRGLGADKVK
        AID SN+G ++L+  GW EG+GLG    G  EPVQA   + R GLG+ + K
Subjt:  AIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNRRGLGADKVK

Q6C233 Protein SQS11.9e-0655.1Show/hide
Query:  AAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNRRGLGA
        A AID SNIG  LL+K GW  G GLG   +G  EP+ A VK ++RG+GA
Subjt:  AAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNRRGLGA

Q9UKJ3 G patch domain-containing protein 81.2e-0551.11Show/hide
Query:  IDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNRRGLG
        I+S NIG +LL+KHGW+ G GLG + QGR +P+   VK +  G+G
Subjt:  IDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNRRGLG

Arabidopsis top hitse value%identityAlignment
AT3G52350.1 D111/G-patch domain-containing protein3.5e-2454.55Show/hide
Query:  SGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNRRGLGADK-VKKKLKETTDTKASDKKNNQERPPPKKAKGLSKRMRKMEEEE
        S  S  + AI SSNIGFQLLKKHGW+EGTGLG+ EQG L P+QA  K+N++GLGA+K  K+K  +  DT   +          KK+K LSK++ KM E E
Subjt:  SGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNRRGLGADK-VKKKLKETTDTKASDKKNNQERPPPKKAKGLSKRMRKMEEEE

Query:  RLFQEKEFERAFFREFWPENV
        +   E EFERAF REFWP+NV
Subjt:  RLFQEKEFERAFFREFWPENV

AT3G54230.1 suppressor of abi3-56.6e-0749.02Show/hide
Query:  AIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNRRGLGADKVK
        AID SN+G ++L+  GW EG+GLG    G  EPVQA   + R GLG+ + K
Subjt:  AIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNRRGLGADKVK

AT3G54230.2 suppressor of abi3-56.6e-0749.02Show/hide
Query:  AIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNRRGLGADKVK
        AID SN+G ++L+  GW EG+GLG    G  EPVQA   + R GLG+ + K
Subjt:  AIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNRRGLGADKVK

AT5G08535.1 D111/G-patch domain-containing protein6.1e-2960Show/hide
Query:  SGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNRRGLGADKVKKKLKETTDTKASDKKNNQERPPPKKAKGLSKRMRKMEEEER
        SG S S AAI+SSNIGFQLLKKHGW+EGTGLG+AEQG L P+QA  K+N+RG+GA +  K  ++    +A D++ +      K++K LSK+MRKM E E+
Subjt:  SGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNRRGLGADKVKKKLKETTDTKASDKKNNQERPPPKKAKGLSKRMRKMEEEER

Query:  LFQEKEFERAFFREFWPENV
          QEKEFERAFFREFWP+NV
Subjt:  LFQEKEFERAFFREFWPENV

AT5G08535.2 D111/G-patch domain-containing protein6.1e-2960Show/hide
Query:  SGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNRRGLGADKVKKKLKETTDTKASDKKNNQERPPPKKAKGLSKRMRKMEEEER
        SG S S AAI+SSNIGFQLLKKHGW+EGTGLG+AEQG L P+QA  K+N+RG+GA +  K  ++    +A D++ +      K++K LSK+MRKM E E+
Subjt:  SGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNRRGLGADKVKKKLKETTDTKASDKKNNQERPPPKKAKGLSKRMRKMEEEER

Query:  LFQEKEFERAFFREFWPENV
          QEKEFERAFFREFWP+NV
Subjt:  LFQEKEFERAFFREFWPENV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGGTGTGATTAGCCGATTGAAATTGAAATTTCAGTGGAACGAGCCGACGCTGACCAAACAGATCTATCCCACCCTCCGCCCCCCTTTTGTTAATTTCGCT
AATCGAAGTCTTCGAGTTTGCATTTGCACGGCGGCATCCGTTCTTCAGAATCAAGAACAAGGAAAAAGGTTGAAGACTCGGCACGCTAGGATTATCCAGAAGTCC
TTTCTCAGTTCCACAGGAGGAAGGATGGACTTGGAGTCCGGCTCAGGAGGCTCTGTTTCTGCTGCAGCCATTGATTCTTCGAACATAGGGTTTCAGCTTTTGAAG
AAGCATGGTTGGAGGGAAGGAACGGGCCTTGGAGTTGCTGAGCAGGGTAGGTTGGAACCCGTACAGGCATCTGTAAAGAATAATAGACGTGGCTTGGGAGCAGAT
AAAGTGAAGAAGAAGCTTAAAGAAACTACCGATACTAAAGCCTCTGATAAGAAAAATAACCAGGAACGTCCTCCTCCAAAGAAAGCGAAGGGGCTGTCAAAAAGG
ATGAGGAAGATGGAAGAGGAAGAGAGGCTATTTCAAGAGAAGGAATTTGAGCGAGCATTTTTTAGGGAATTTTGGCCAGAAAATGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGGTGTGATTAGCCGATTGAAATTGAAATTTCAGTGGAACGAGCCGACGCTGACCAAACAGATCTATCCCACCCTCCGCCCCCCTTTTGTTAATTTCGCT
AATCGAAGTCTTCGAGTTTGCATTTGCACGGCGGCATCCGTTCTTCAGAATCAAGAACAAGGAAAAAGGTTGAAGACTCGGCACGCTAGGATTATCCAGAAGTCC
TTTCTCAGTTCCACAGGAGGAAGGATGGACTTGGAGTCCGGCTCAGGAGGCTCTGTTTCTGCTGCAGCCATTGATTCTTCGAACATAGGGTTTCAGCTTTTGAAG
AAGCATGGTTGGAGGGAAGGAACGGGCCTTGGAGTTGCTGAGCAGGGTAGGTTGGAACCCGTACAGGCATCTGTAAAGAATAATAGACGTGGCTTGGGAGCAGAT
AAAGTGAAGAAGAAGCTTAAAGAAACTACCGATACTAAAGCCTCTGATAAGAAAAATAACCAGGAACGTCCTCCTCCAAAGAAAGCGAAGGGGCTGTCAAAAAGG
ATGAGGAAGATGGAAGAGGAAGAGAGGCTATTTCAAGAGAAGGAATTTGAGCGAGCATTTTTTAGGGAATTTTGGCCAGAAAATGTTTGA
Protein sequenceShow/hide protein sequence
MEGVISRLKLKFQWNEPTLTKQIYPTLRPPFVNFANRSLRVCICTAASVLQNQEQGKRLKTRHARIIQKSFLSSTGGRMDLESGSGGSVSAAAIDSSNIGFQLLK
KHGWREGTGLGVAEQGRLEPVQASVKNNRRGLGADKVKKKLKETTDTKASDKKNNQERPPPKKAKGLSKRMRKMEEEERLFQEKEFERAFFREFWPENV