; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC11G220670 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC11G220670
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptiontRNA pseudouridine synthase
Genome locationCicolChr11:25140565..25145037
RNA-Seq ExpressionCcUC11G220670
SyntenyCcUC11G220670
Gene Ontology termsGO:0031119 - tRNA pseudouridine synthesis (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0106029 - tRNA pseudouridine synthase activity (molecular function)
InterPro domainsIPR001406 - Pseudouridine synthase I, TruA
IPR020094 - Pseudouridine synthase TruA/RsuA/RluB/E/F, N-terminal
IPR020095 - Pseudouridine synthase I, TruA, C-terminal
IPR020097 - Pseudouridine synthase I, TruA, alpha/beta domain
IPR020103 - Pseudouridine synthase, catalytic domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008445970.1 PREDICTED: tRNA pseudouridine synthase A isoform X1 [Cucumis melo]5.1e-19093.43Show/hide
Query:  MTENQKHGLEFSFDSSSQRPLKIGKTADEVLRGDEEEAEPMNRNPGIQRYLVAVEYIGTRFSGSQKQPTCRTVVGVLEEAFQKFIGQPVSVFCSSRTDAG
        MTENQKHGLE S DSSSQRPLKIGKT D+V  GDEEEAE MN  PGIQRYLVAVEYIGTRFSGSQ+QP CRTVVG LEEAFQKFIGQPVSVFCSSRTDAG
Subjt:  MTENQKHGLEFSFDSSSQRPLKIGKTADEVLRGDEEEAEPMNRNPGIQRYLVAVEYIGTRFSGSQKQPTCRTVVGVLEEAFQKFIGQPVSVFCSSRTDAG

Query:  VHALSNVCHVDVERLSKRKPGEVLPPHEPGVVHRAVNHFLQKHEGDVTVVDVRSVPNDFHARYKAQERTYFYRLVSGPEALLSFEKDRAWHVPETLNIGA
        VHALSNVCHVDVER+SKRKPGEVLPPHEPGVVH+AVNHFLQKHEGDVTVVDVRSVPNDFHARYKAQERTYFYRLVSGPEAL SFEKDRAWHVPETLNIGA
Subjt:  VHALSNVCHVDVERLSKRKPGEVLPPHEPGVVHRAVNHFLQKHEGDVTVVDVRSVPNDFHARYKAQERTYFYRLVSGPEALLSFEKDRAWHVPETLNIGA

Query:  MQEACKVLVGHHDFSSFRAAGCQANSPIRTLDELDVCEVVSTPYFPTSMERKQRQGKEEGENEVPHSETFEVGFGVRRRHRCFVVTARARSFLYHQVRLM
        MQEACKVLVGHHDFSSFRAAGCQANSPIRTLDEL+VCEV STPYFPTSMERKQRQGKEE ENE PHSET EVGFG+RRRHRCFVVTARARSFLYHQVRLM
Subjt:  MQEACKVLVGHHDFSSFRAAGCQANSPIRTLDELDVCEVVSTPYFPTSMERKQRQGKEEGENEVPHSETFEVGFGVRRRHRCFVVTARARSFLYHQVRLM

Query:  VGVLKAVGTGDLTVGDVERILEAKNVNSASPMAPACGLYLGHVKYDLPPA
        VGVLKAVGTGDLTVGDVERILEAKNV+SA PMAPACGLYLGHVKYDLPPA
Subjt:  VGVLKAVGTGDLTVGDVERILEAKNVNSASPMAPACGLYLGHVKYDLPPA

XP_008445972.1 PREDICTED: tRNA pseudouridine synthase A isoform X2 [Cucumis melo]2.8e-18893.14Show/hide
Query:  MTENQKHGLEFSFDSSSQRPLKIGKTADEVLRGDEEEAEPMNRNPGIQRYLVAVEYIGTRFSGSQKQPTCRTVVGVLEEAFQKFIGQPVSVFCSSRTDAG
        MTENQKHGLE S DSSSQRPLKIGKT D+V  GDEEEAE MN  PGIQRYLVAVEYIGTRFSGSQ+QP CRTVVG LEEAFQKFIGQPVSVFCSSRTDAG
Subjt:  MTENQKHGLEFSFDSSSQRPLKIGKTADEVLRGDEEEAEPMNRNPGIQRYLVAVEYIGTRFSGSQKQPTCRTVVGVLEEAFQKFIGQPVSVFCSSRTDAG

Query:  VHALSNVCHVDVERLSKRKPGEVLPPHEPGVVHRAVNHFLQKHEGDVTVVDVRSVPNDFHARYKAQERTYFYRLVSGPEALLSFEKDRAWHVPETLNIGA
        VHALSNVCHVDVER+SKRKPGEVLPPHEPGVVH+AVNHFLQKHEGDVTVVDVRSVPNDFHARYKAQERTYFYRLVSGPEAL SFEKDRAWHVPETLNIGA
Subjt:  VHALSNVCHVDVERLSKRKPGEVLPPHEPGVVHRAVNHFLQKHEGDVTVVDVRSVPNDFHARYKAQERTYFYRLVSGPEALLSFEKDRAWHVPETLNIGA

Query:  MQEACKVLVGHHDFSSFRAAGCQANSPIRTLDELDVCEVVSTPYFPTSMERKQRQGKEEGENEVPHSETFEVGFGVRRRHRCFVVTARARSFLYHQVRLM
        MQEACKVLVGHHDFSSFRAAGCQANSPIRTLDEL+VCEV STPYFPTSMERKQRQGKEE ENE PHSET EVGFG+RRRHRCFVVTARARSFLYHQVRLM
Subjt:  MQEACKVLVGHHDFSSFRAAGCQANSPIRTLDELDVCEVVSTPYFPTSMERKQRQGKEEGENEVPHSETFEVGFGVRRRHRCFVVTARARSFLYHQVRLM

Query:  VGVLKAVGTGDLTVGDVERILEAKNVNSASPMAPACGLYLGHVKYDLPPA
        VGVLKAVGTGDLTVGD ERILEAKNV+SA PMAPACGLYLGHVKYDLPPA
Subjt:  VGVLKAVGTGDLTVGDVERILEAKNVNSASPMAPACGLYLGHVKYDLPPA

XP_011655540.1 uncharacterized protein LOC101221274 isoform X1 [Cucumis sativus]2.0e-18692.29Show/hide
Query:  MTENQKHGLEFSFDSSSQRPLKIGKTADEVLRGDEEEAEPMNRNPGIQRYLVAVEYIGTRFSGSQKQPTCRTVVGVLEEAFQKFIGQPVSVFCSSRTDAG
        MTENQKHGLE S DSSSQRPLKIGKT DE+  GDEEEAE MN  PGIQRYLVAVEYIGTRF GSQ+QP CRTVVG LEEAFQKFIGQPVSVFCSSRTDAG
Subjt:  MTENQKHGLEFSFDSSSQRPLKIGKTADEVLRGDEEEAEPMNRNPGIQRYLVAVEYIGTRFSGSQKQPTCRTVVGVLEEAFQKFIGQPVSVFCSSRTDAG

Query:  VHALSNVCHVDVERLSKRKPGEVLPPHEPGVVHRAVNHFLQKHEGDVTVVDVRSVPNDFHARYKAQERTYFYRLVSGPEALLSFEKDRAWHVPETLNIGA
        VHALSNVCHVDVER+SKRKPGEVLPPHEPGVVH+AVNHFLQKHEGDVTVVDVRSVPNDFHARYKAQERTYFYRLVSGPEAL SFEKDRAWHVPETLNIGA
Subjt:  VHALSNVCHVDVERLSKRKPGEVLPPHEPGVVHRAVNHFLQKHEGDVTVVDVRSVPNDFHARYKAQERTYFYRLVSGPEALLSFEKDRAWHVPETLNIGA

Query:  MQEACKVLVGHHDFSSFRAAGCQANSPIRTLDELDVCEVVSTPYFPTSMERKQRQGKEEGENEVPHSETFEVGFGVRRRHRCFVVTARARSFLYHQVRLM
        MQEACKVLVGHHDFSSFRAAGCQANSPIRTLDEL+VCEV STPYFPTSMERKQRQGKEE E EVP SET EVGFG+RRRHRCFVVTARARSFLYHQVRLM
Subjt:  MQEACKVLVGHHDFSSFRAAGCQANSPIRTLDELDVCEVVSTPYFPTSMERKQRQGKEEGENEVPHSETFEVGFGVRRRHRCFVVTARARSFLYHQVRLM

Query:  VGVLKAVGTGDLTVGDVERILEAKNVNSASPMAPACGLYLGHVKYDLPPA
        VGVLKAVG+GDLTVGDV RILEAKNV+SA PMAPACGLYLGHVKYDLPPA
Subjt:  VGVLKAVGTGDLTVGDVERILEAKNVNSASPMAPACGLYLGHVKYDLPPA

XP_038877866.1 tRNA pseudouridine synthase A isoform X1 [Benincasa hispida]1.4e-18791.16Show/hide
Query:  MTENQKHGLEFSFDSSSQRPLKIGKTADEVLRGDEEEAEPMNRNPGIQRYLVAVEYIGTRFSGSQKQPTCRTVVGV------------LEEAFQKFIGQP
        MTENQKHGLEFS DSS QRPLKIGKT DEVL   EEEAE MNRNPGIQRYLVAVEYIGTRFSGSQ+QP CRTVVG             LEEAFQKFIGQP
Subjt:  MTENQKHGLEFSFDSSSQRPLKIGKTADEVLRGDEEEAEPMNRNPGIQRYLVAVEYIGTRFSGSQKQPTCRTVVGV------------LEEAFQKFIGQP

Query:  VSVFCSSRTDAGVHALSNVCHVDVERLSKRKPGEVLPPHEPGVVHRAVNHFLQKHEGDVTVVDVRSVPNDFHARYKAQERTYFYRLVSGPEALLSFEKDR
        VSVFCSSRTDAGVHALSNVCHVDVER+SKRKPGEVLPPHEPGVVHRAVNHFLQKHEGDVTVVDVRSVPNDFHARYKAQERTYFYRLVSGPEAL SFEKDR
Subjt:  VSVFCSSRTDAGVHALSNVCHVDVERLSKRKPGEVLPPHEPGVVHRAVNHFLQKHEGDVTVVDVRSVPNDFHARYKAQERTYFYRLVSGPEALLSFEKDR

Query:  AWHVPETLNIGAMQEACKVLVGHHDFSSFRAAGCQANSPIRTLDELDVCEVVSTPYFPTSMERKQRQGKEEGENEVPHSETFEVGFGVRRRHRCFVVTAR
        AWHV ETLNIGAMQ+ACKVLVGHHDFSSFRAAGCQANSPIRTLDELDVCEVVSTPYFPTSMERKQRQGK EG++EVPHSET EVGFG+RRRHRCFVVTAR
Subjt:  AWHVPETLNIGAMQEACKVLVGHHDFSSFRAAGCQANSPIRTLDELDVCEVVSTPYFPTSMERKQRQGKEEGENEVPHSETFEVGFGVRRRHRCFVVTAR

Query:  ARSFLYHQVRLMVGVLKAVGTGDLTVGDVERILEAKNVNSASPMAPACGLYLGHVKYDLPPA
        ARSFLYHQVRLMVGVLKAVGTGDLTVGDVERILEAKNVNSASPMAPACGLYLGHV+YDLPPA
Subjt:  ARSFLYHQVRLMVGVLKAVGTGDLTVGDVERILEAKNVNSASPMAPACGLYLGHVKYDLPPA

XP_038877867.1 tRNA pseudouridine synthase A isoform X2 [Benincasa hispida]3.0e-19094.29Show/hide
Query:  MTENQKHGLEFSFDSSSQRPLKIGKTADEVLRGDEEEAEPMNRNPGIQRYLVAVEYIGTRFSGSQKQPTCRTVVGVLEEAFQKFIGQPVSVFCSSRTDAG
        MTENQKHGLEFS DSS QRPLKIGKT DEVL   EEEAE MNRNPGIQRYLVAVEYIGTRFSGSQ+QP CRTVVG LEEAFQKFIGQPVSVFCSSRTDAG
Subjt:  MTENQKHGLEFSFDSSSQRPLKIGKTADEVLRGDEEEAEPMNRNPGIQRYLVAVEYIGTRFSGSQKQPTCRTVVGVLEEAFQKFIGQPVSVFCSSRTDAG

Query:  VHALSNVCHVDVERLSKRKPGEVLPPHEPGVVHRAVNHFLQKHEGDVTVVDVRSVPNDFHARYKAQERTYFYRLVSGPEALLSFEKDRAWHVPETLNIGA
        VHALSNVCHVDVER+SKRKPGEVLPPHEPGVVHRAVNHFLQKHEGDVTVVDVRSVPNDFHARYKAQERTYFYRLVSGPEAL SFEKDRAWHV ETLNIGA
Subjt:  VHALSNVCHVDVERLSKRKPGEVLPPHEPGVVHRAVNHFLQKHEGDVTVVDVRSVPNDFHARYKAQERTYFYRLVSGPEALLSFEKDRAWHVPETLNIGA

Query:  MQEACKVLVGHHDFSSFRAAGCQANSPIRTLDELDVCEVVSTPYFPTSMERKQRQGKEEGENEVPHSETFEVGFGVRRRHRCFVVTARARSFLYHQVRLM
        MQ+ACKVLVGHHDFSSFRAAGCQANSPIRTLDELDVCEVVSTPYFPTSMERKQRQGK EG++EVPHSET EVGFG+RRRHRCFVVTARARSFLYHQVRLM
Subjt:  MQEACKVLVGHHDFSSFRAAGCQANSPIRTLDELDVCEVVSTPYFPTSMERKQRQGKEEGENEVPHSETFEVGFGVRRRHRCFVVTARARSFLYHQVRLM

Query:  VGVLKAVGTGDLTVGDVERILEAKNVNSASPMAPACGLYLGHVKYDLPPA
        VGVLKAVGTGDLTVGDVERILEAKNVNSASPMAPACGLYLGHV+YDLPPA
Subjt:  VGVLKAVGTGDLTVGDVERILEAKNVNSASPMAPACGLYLGHVKYDLPPA

TrEMBL top hitse value%identityAlignment
A0A0A0KRX0 tRNA pseudouridine synthase9.6e-18792.29Show/hide
Query:  MTENQKHGLEFSFDSSSQRPLKIGKTADEVLRGDEEEAEPMNRNPGIQRYLVAVEYIGTRFSGSQKQPTCRTVVGVLEEAFQKFIGQPVSVFCSSRTDAG
        MTENQKHGLE S DSSSQRPLKIGKT DE+  GDEEEAE MN  PGIQRYLVAVEYIGTRF GSQ+QP CRTVVG LEEAFQKFIGQPVSVFCSSRTDAG
Subjt:  MTENQKHGLEFSFDSSSQRPLKIGKTADEVLRGDEEEAEPMNRNPGIQRYLVAVEYIGTRFSGSQKQPTCRTVVGVLEEAFQKFIGQPVSVFCSSRTDAG

Query:  VHALSNVCHVDVERLSKRKPGEVLPPHEPGVVHRAVNHFLQKHEGDVTVVDVRSVPNDFHARYKAQERTYFYRLVSGPEALLSFEKDRAWHVPETLNIGA
        VHALSNVCHVDVER+SKRKPGEVLPPHEPGVVH+AVNHFLQKHEGDVTVVDVRSVPNDFHARYKAQERTYFYRLVSGPEAL SFEKDRAWHVPETLNIGA
Subjt:  VHALSNVCHVDVERLSKRKPGEVLPPHEPGVVHRAVNHFLQKHEGDVTVVDVRSVPNDFHARYKAQERTYFYRLVSGPEALLSFEKDRAWHVPETLNIGA

Query:  MQEACKVLVGHHDFSSFRAAGCQANSPIRTLDELDVCEVVSTPYFPTSMERKQRQGKEEGENEVPHSETFEVGFGVRRRHRCFVVTARARSFLYHQVRLM
        MQEACKVLVGHHDFSSFRAAGCQANSPIRTLDEL+VCEV STPYFPTSMERKQRQGKEE E EVP SET EVGFG+RRRHRCFVVTARARSFLYHQVRLM
Subjt:  MQEACKVLVGHHDFSSFRAAGCQANSPIRTLDELDVCEVVSTPYFPTSMERKQRQGKEEGENEVPHSETFEVGFGVRRRHRCFVVTARARSFLYHQVRLM

Query:  VGVLKAVGTGDLTVGDVERILEAKNVNSASPMAPACGLYLGHVKYDLPPA
        VGVLKAVG+GDLTVGDV RILEAKNV+SA PMAPACGLYLGHVKYDLPPA
Subjt:  VGVLKAVGTGDLTVGDVERILEAKNVNSASPMAPACGLYLGHVKYDLPPA

A0A1S3BDG9 tRNA pseudouridine synthase2.4e-19093.43Show/hide
Query:  MTENQKHGLEFSFDSSSQRPLKIGKTADEVLRGDEEEAEPMNRNPGIQRYLVAVEYIGTRFSGSQKQPTCRTVVGVLEEAFQKFIGQPVSVFCSSRTDAG
        MTENQKHGLE S DSSSQRPLKIGKT D+V  GDEEEAE MN  PGIQRYLVAVEYIGTRFSGSQ+QP CRTVVG LEEAFQKFIGQPVSVFCSSRTDAG
Subjt:  MTENQKHGLEFSFDSSSQRPLKIGKTADEVLRGDEEEAEPMNRNPGIQRYLVAVEYIGTRFSGSQKQPTCRTVVGVLEEAFQKFIGQPVSVFCSSRTDAG

Query:  VHALSNVCHVDVERLSKRKPGEVLPPHEPGVVHRAVNHFLQKHEGDVTVVDVRSVPNDFHARYKAQERTYFYRLVSGPEALLSFEKDRAWHVPETLNIGA
        VHALSNVCHVDVER+SKRKPGEVLPPHEPGVVH+AVNHFLQKHEGDVTVVDVRSVPNDFHARYKAQERTYFYRLVSGPEAL SFEKDRAWHVPETLNIGA
Subjt:  VHALSNVCHVDVERLSKRKPGEVLPPHEPGVVHRAVNHFLQKHEGDVTVVDVRSVPNDFHARYKAQERTYFYRLVSGPEALLSFEKDRAWHVPETLNIGA

Query:  MQEACKVLVGHHDFSSFRAAGCQANSPIRTLDELDVCEVVSTPYFPTSMERKQRQGKEEGENEVPHSETFEVGFGVRRRHRCFVVTARARSFLYHQVRLM
        MQEACKVLVGHHDFSSFRAAGCQANSPIRTLDEL+VCEV STPYFPTSMERKQRQGKEE ENE PHSET EVGFG+RRRHRCFVVTARARSFLYHQVRLM
Subjt:  MQEACKVLVGHHDFSSFRAAGCQANSPIRTLDELDVCEVVSTPYFPTSMERKQRQGKEEGENEVPHSETFEVGFGVRRRHRCFVVTARARSFLYHQVRLM

Query:  VGVLKAVGTGDLTVGDVERILEAKNVNSASPMAPACGLYLGHVKYDLPPA
        VGVLKAVGTGDLTVGDVERILEAKNV+SA PMAPACGLYLGHVKYDLPPA
Subjt:  VGVLKAVGTGDLTVGDVERILEAKNVNSASPMAPACGLYLGHVKYDLPPA

A0A1S3BDY4 tRNA pseudouridine synthase1.3e-18893.14Show/hide
Query:  MTENQKHGLEFSFDSSSQRPLKIGKTADEVLRGDEEEAEPMNRNPGIQRYLVAVEYIGTRFSGSQKQPTCRTVVGVLEEAFQKFIGQPVSVFCSSRTDAG
        MTENQKHGLE S DSSSQRPLKIGKT D+V  GDEEEAE MN  PGIQRYLVAVEYIGTRFSGSQ+QP CRTVVG LEEAFQKFIGQPVSVFCSSRTDAG
Subjt:  MTENQKHGLEFSFDSSSQRPLKIGKTADEVLRGDEEEAEPMNRNPGIQRYLVAVEYIGTRFSGSQKQPTCRTVVGVLEEAFQKFIGQPVSVFCSSRTDAG

Query:  VHALSNVCHVDVERLSKRKPGEVLPPHEPGVVHRAVNHFLQKHEGDVTVVDVRSVPNDFHARYKAQERTYFYRLVSGPEALLSFEKDRAWHVPETLNIGA
        VHALSNVCHVDVER+SKRKPGEVLPPHEPGVVH+AVNHFLQKHEGDVTVVDVRSVPNDFHARYKAQERTYFYRLVSGPEAL SFEKDRAWHVPETLNIGA
Subjt:  VHALSNVCHVDVERLSKRKPGEVLPPHEPGVVHRAVNHFLQKHEGDVTVVDVRSVPNDFHARYKAQERTYFYRLVSGPEALLSFEKDRAWHVPETLNIGA

Query:  MQEACKVLVGHHDFSSFRAAGCQANSPIRTLDELDVCEVVSTPYFPTSMERKQRQGKEEGENEVPHSETFEVGFGVRRRHRCFVVTARARSFLYHQVRLM
        MQEACKVLVGHHDFSSFRAAGCQANSPIRTLDEL+VCEV STPYFPTSMERKQRQGKEE ENE PHSET EVGFG+RRRHRCFVVTARARSFLYHQVRLM
Subjt:  MQEACKVLVGHHDFSSFRAAGCQANSPIRTLDELDVCEVVSTPYFPTSMERKQRQGKEEGENEVPHSETFEVGFGVRRRHRCFVVTARARSFLYHQVRLM

Query:  VGVLKAVGTGDLTVGDVERILEAKNVNSASPMAPACGLYLGHVKYDLPPA
        VGVLKAVGTGDLTVGD ERILEAKNV+SA PMAPACGLYLGHVKYDLPPA
Subjt:  VGVLKAVGTGDLTVGDVERILEAKNVNSASPMAPACGLYLGHVKYDLPPA

A0A5D3CZZ6 tRNA pseudouridine synthase2.4e-19093.43Show/hide
Query:  MTENQKHGLEFSFDSSSQRPLKIGKTADEVLRGDEEEAEPMNRNPGIQRYLVAVEYIGTRFSGSQKQPTCRTVVGVLEEAFQKFIGQPVSVFCSSRTDAG
        MTENQKHGLE S DSSSQRPLKIGKT D+V  GDEEEAE MN  PGIQRYLVAVEYIGTRFSGSQ+QP CRTVVG LEEAFQKFIGQPVSVFCSSRTDAG
Subjt:  MTENQKHGLEFSFDSSSQRPLKIGKTADEVLRGDEEEAEPMNRNPGIQRYLVAVEYIGTRFSGSQKQPTCRTVVGVLEEAFQKFIGQPVSVFCSSRTDAG

Query:  VHALSNVCHVDVERLSKRKPGEVLPPHEPGVVHRAVNHFLQKHEGDVTVVDVRSVPNDFHARYKAQERTYFYRLVSGPEALLSFEKDRAWHVPETLNIGA
        VHALSNVCHVDVER+SKRKPGEVLPPHEPGVVH+AVNHFLQKHEGDVTVVDVRSVPNDFHARYKAQERTYFYRLVSGPEAL SFEKDRAWHVPETLNIGA
Subjt:  VHALSNVCHVDVERLSKRKPGEVLPPHEPGVVHRAVNHFLQKHEGDVTVVDVRSVPNDFHARYKAQERTYFYRLVSGPEALLSFEKDRAWHVPETLNIGA

Query:  MQEACKVLVGHHDFSSFRAAGCQANSPIRTLDELDVCEVVSTPYFPTSMERKQRQGKEEGENEVPHSETFEVGFGVRRRHRCFVVTARARSFLYHQVRLM
        MQEACKVLVGHHDFSSFRAAGCQANSPIRTLDEL+VCEV STPYFPTSMERKQRQGKEE ENE PHSET EVGFG+RRRHRCFVVTARARSFLYHQVRLM
Subjt:  MQEACKVLVGHHDFSSFRAAGCQANSPIRTLDELDVCEVVSTPYFPTSMERKQRQGKEEGENEVPHSETFEVGFGVRRRHRCFVVTARARSFLYHQVRLM

Query:  VGVLKAVGTGDLTVGDVERILEAKNVNSASPMAPACGLYLGHVKYDLPPA
        VGVLKAVGTGDLTVGDVERILEAKNV+SA PMAPACGLYLGHVKYDLPPA
Subjt:  VGVLKAVGTGDLTVGDVERILEAKNVNSASPMAPACGLYLGHVKYDLPPA

A0A6J1KFZ8 tRNA pseudouridine synthase4.0e-18590.34Show/hide
Query:  MTENQKHGLEFSFDSSSQRPLKIGKTADEVLRGDEEEAEPMNRNPGIQRYLVAVEYIGTRFSGSQKQPTCRTVVGVLEEAFQKFIGQPVSVFCSSRTDAG
        MTENQKH LEFS DSS QRPLKIGKT +E L GD+EEAE MNRNPGIQRYLVAVEYIGTRFSGSQ+QP CRTVVGVLEEAF+KFIGQ VSVFCSSRTDAG
Subjt:  MTENQKHGLEFSFDSSSQRPLKIGKTADEVLRGDEEEAEPMNRNPGIQRYLVAVEYIGTRFSGSQKQPTCRTVVGVLEEAFQKFIGQPVSVFCSSRTDAG

Query:  VHALSNVCHVDVERLSKRKPGEVLPPHEPGVVHRAVNHFLQKHEGDVTVVDVRSVPNDFHARYKAQERTYFYRLVSGPEALLSFEKDRAWHVPETLNIGA
        VHALSNVCHVDVER+SKRKPGEVLPPHEPGVV RAVNHFLQK++GDVTVVDVRSVPND+HARYKAQERTYFYRLVSGPE L SF+KDR WHVPE LNIGA
Subjt:  VHALSNVCHVDVERLSKRKPGEVLPPHEPGVVHRAVNHFLQKHEGDVTVVDVRSVPNDFHARYKAQERTYFYRLVSGPEALLSFEKDRAWHVPETLNIGA

Query:  MQEACKVLVGHHDFSSFRAAGCQANSPIRTLDELDVCEVVSTPYFPTSMERKQRQGKEEGENEVPHSETFEVGFGVRRRHRCFVVTARARSFLYHQVRLM
        MQEACKVLVGHHDFSSFRAAGCQANSP+RTLDELDVCEV+STPYFP+SMERKQRQGKEEGENEV HSE++EVGFG+RRRHRCFVVTARARSFLYHQVRLM
Subjt:  MQEACKVLVGHHDFSSFRAAGCQANSPIRTLDELDVCEVVSTPYFPTSMERKQRQGKEEGENEVPHSETFEVGFGVRRRHRCFVVTARARSFLYHQVRLM

Query:  VGVLKAVGTGDLTVGDVERILEAKNVNSASPMAPACGLYLGHVKYDLPPASP
        VGVLK VGTGDLTVGDVERILEAKNV+SASPMAPACGLYLGHVKYDLPP  P
Subjt:  VGVLKAVGTGDLTVGDVERILEAKNVNSASPMAPACGLYLGHVKYDLPPASP

SwissProt top hitse value%identityAlignment
A7HPQ3 tRNA pseudouridine synthase A3.5e-4537.25Show/hide
Query:  RYLVAVEYIGTRFSGSQKQPTCRTVVGVLEEAFQKFIGQPVSVFCSSRTDAGVHALSNVCHVDVERLSKRKPGEVLPPHEPGVVHRAVNHFLQKHEGDVT
        RY + +EY G+ F G Q Q   R+V  VLEE  + F GQ + +F + RTDAGVHAL  V HVD E            P  P  +  AVN  ++ H   V 
Subjt:  RYLVAVEYIGTRFSGSQKQPTCRTVVGVLEEAFQKFIGQPVSVFCSSRTDAGVHALSNVCHVDVERLSKRKPGEVLPPHEPGVVHRAVNHFLQKHEGDVT

Query:  VVDVRSVPNDFHARYKAQERTYFYRLVSGPEALLSFEKDRAWHVPETLNIGAMQEACKVLVGHHDFSSFRAAGCQANSPIRTLDELDVCEVVSTPYFPTS
        +V+   VP+ F AR+ A +R Y YR+V+   A L+ ++ +AW V +TL+  AM +A + LVG+HDF++FR+  CQA SP++T+DE+ V            
Subjt:  VVDVRSVPNDFHARYKAQERTYFYRLVSGPEALLSFEKDRAWHVPETLNIGAMQEACKVLVGHHDFSSFRAAGCQANSPIRTLDELDVCEVVSTPYFPTS

Query:  MERKQRQGKEEGENEVPHSETFEVGFGVRRRHRCFVVTARARSFLYHQVRLMVGVLKAVGTGDLTVGDVERILEAKNVNSASPMAPACGLYLGHVKYD
                         +++  E             +  RARSFL++QVR  VG LK VG G  T   VE+ L AK+  +  P+AP  GLYL  V Y+
Subjt:  MERKQRQGKEEGENEVPHSETFEVGFGVRRRHRCFVVTARARSFLYHQVRLMVGVLKAVGTGDLTVGDVERILEAKNVNSASPMAPACGLYLGHVKYD

A7IKI9 tRNA pseudouridine synthase A1.6e-4538.59Show/hide
Query:  RYLVAVEYIGTRFSGSQKQPTCRTVVGVLEEAFQKFIGQPVSVFCSSRTDAGVHALSNVCHVDVERLSKRKPGEVLPPHEPGVVHRAVNHFLQKHEGDVT
        RY + +EY GT ++G Q Q   +TV G L +AF++F G+ V V  + RTDAGVHA   V HVD+ R                 V  A+   L+ H   + 
Subjt:  RYLVAVEYIGTRFSGSQKQPTCRTVVGVLEEAFQKFIGQPVSVFCSSRTDAGVHALSNVCHVDVERLSKRKPGEVLPPHEPGVVHRAVNHFLQKHEGDVT

Query:  VVDVRSVPNDFHARYKAQERTYFYRLVS-GPEALLSFEKDRAWHVPETLNIGAMQEACKVLVGHHDFSSFRAAGCQANSPIRTLDELDVCEVVSTPYFPT
        V+    VP+ F AR+ A +R Y YR+++  P+  L+ ++DRAW +P+ L+  AM EA + L+G HDFS+FRAA CQA SP++TLD+LDV           
Subjt:  VVDVRSVPNDFHARYKAQERTYFYRLVS-GPEALLSFEKDRAWHVPETLNIGAMQEACKVLVGHHDFSSFRAAGCQANSPIRTLDELDVCEVVSTPYFPT

Query:  SMERKQRQGKEEGENEVPHSETFEVGFGVRRRHRCFVVTARARSFLYHQVRLMVGVLKAVGTGDLTVGDVERILEAKNVNSASPMAPACGLYLGHVKY
              R G E                          V   ARSFL+HQVR MVG L  VG G  +  D+E  L+A +     PMAPA GLYL  V Y
Subjt:  SMERKQRQGKEEGENEVPHSETFEVGFGVRRRHRCFVVTARARSFLYHQVRLMVGVLKAVGTGDLTVGDVERILEAKNVNSASPMAPACGLYLGHVKY

A9ILJ7 tRNA pseudouridine synthase A1.8e-4435.55Show/hide
Query:  IQRYLVAVEYIGTRFSGSQKQPTCRTVVGVLEEAFQKFIGQPVSVFCSSRTDAGVHALSNVCHVDVERLSKRKPGEVLPPHEPGVVHRAVNHFLQKHEGD
        + R+ + +EY G+ ++G Q+Q    T+ G LE+A  +F GQ +++  + RTDAGVHA   V HVD  +          PPH    V  A+N  L++    
Subjt:  IQRYLVAVEYIGTRFSGSQKQPTCRTVVGVLEEAFQKFIGQPVSVFCSSRTDAGVHALSNVCHVDVERLSKRKPGEVLPPHEPGVVHRAVNHFLQKHEGD

Query:  VTVVDVRSVPNDFHARYKAQERTYFYRLVS--GPEALLSFEKDRAWHVPETLNIGAMQEACKVLVGHHDFSSFRAAGCQANSPIRTLDELDVCEVVSTPY
        +++++V +VP+DF AR+ A +R Y +++++   P AL      R W +P+ LN  AM EA + LVG HDF++FR+A CQA SPIRTL+ LD+        
Subjt:  VTVVDVRSVPNDFHARYKAQERTYFYRLVS--GPEALLSFEKDRAWHVPETLNIGAMQEACKVLVGHHDFSSFRAAGCQANSPIRTLDELDVCEVVSTPY

Query:  FPTSMERKQRQGKEEGENEVPHSETFEVGFGVRRRHRCFVVTARARSFLYHQVRLMVGVLKAVGTGDLTVGDVERILEAKNVNSASPMAPACGLYLGHVK
                Q++G+E                          + A+ARSFL+HQ+R   G L  VG G  T  D+E  L AK+      +AP  GLYL  V+
Subjt:  FPTSMERKQRQGKEEGENEVPHSETFEVGFGVRRRHRCFVVTARARSFLYHQVRLMVGVLKAVGTGDLTVGDVERILEAKNVNSASPMAPACGLYLGHVK

Query:  Y
        Y
Subjt:  Y

B6IPI0 tRNA pseudouridine synthase A3.2e-4640.13Show/hide
Query:  IQRYLVAVEYIGTRFSGSQKQPTCRTVVGVLEEAFQKFIGQPVSVFCSSRTDAGVHALSNVCHVDVERLSKRKPGEVLPPHEPGVVHRAVNHFLQKHEGD
        +QR+ + +EY G  F G Q+Q    +V   LEEA  +F  + V+VFC+ RTDAGVHAL+ V  VD+ R +               V  A+N  L+ H   
Subjt:  IQRYLVAVEYIGTRFSGSQKQPTCRTVVGVLEEAFQKFIGQPVSVFCSSRTDAGVHALSNVCHVDVERLSKRKPGEVLPPHEPGVVHRAVNHFLQKHEGD

Query:  VTVVDVRSVPNDFHARYKAQERTYFYRLVSGPEALLSFEKDRAWHVPETLNIGAMQEACKVLVGHHDFSSFRAAGCQANSPIRTLDELDVCEVVSTPYFP
        V V+ V  V  DFHAR+    R Y YR+++   A  + E  R WHV   L+  AM EA + LVG HDFSSFRA+ CQA SP++TL +L V          
Subjt:  VTVVDVRSVPNDFHARYKAQERTYFYRLVSGPEALLSFEKDRAWHVPETLNIGAMQEACKVLVGHHDFSSFRAAGCQANSPIRTLDELDVCEVVSTPYFP

Query:  TSMERKQRQGKEEGENEVPHSETFEVGFGVRRRHRCFVVTARARSFLYHQVRLMVGVLKAVGTGDLTVGDVERILEAKNVNSASPMAPACGLYLGHVKY
                                 VG  VR       + ARARSFL+HQVR MVG LK VG G  T  DV R L A+N ++A P APA GLY     Y
Subjt:  TSMERKQRQGKEEGENEVPHSETFEVGFGVRRRHRCFVVTARARSFLYHQVRLMVGVLKAVGTGDLTVGDVERILEAKNVNSASPMAPACGLYLGHVKY

Q2WAT0 tRNA pseudouridine synthase A2.5e-4639.06Show/hide
Query:  RYLVAVEYIGTRFSGSQKQPTCRTVVGVLEEAFQKFIGQPVSVFCSSRTDAGVHALSNVCHVDVERLSKRKPGEVLPPHEPGVVHRAVNHFLQKHEGDVT
        RY + VEY GT F+G Q+Q    +V G+LE+A +K  G P ++  + RTDAGVHA   V HVD+ R            +    V  A+N+ ++     V 
Subjt:  RYLVAVEYIGTRFSGSQKQPTCRTVVGVLEEAFQKFIGQPVSVFCSSRTDAGVHALSNVCHVDVERLSKRKPGEVLPPHEPGVVHRAVNHFLQKHEGDVT

Query:  VVDVRSVPNDFHARYKAQERTYFYRLVSGPEALLSFEKDRAWHVPETLNIGAMQEACKVLVGHHDFSSFRAAGCQANSPIRTLDELDVCEVVSTPYFPTS
        VV    V  DFHAR+ A  R Y YR+V+   A L+ ++ RAW VP  L+  AM E  + L+GHHDFS+FRA+ CQA SP++TLD LDV  V         
Subjt:  VVDVRSVPNDFHARYKAQERTYFYRLVSGPEALLSFEKDRAWHVPETLNIGAMQEACKVLVGHHDFSSFRAAGCQANSPIRTLDELDVCEVVSTPYFPTS

Query:  MERKQRQGKEEGENEVPHSETFEVGFGVRRRHRCFVVTARARSFLYHQVRLMVGVLKAVGTGDLTVGDVERILEAKNVNSASPMAPACGLYLGHVKY
               G+E                          + A ARSFL+HQVR MVG LK VG G  +  D+ ++LEA++     P APA GL L  V Y
Subjt:  MERKQRQGKEEGENEVPHSETFEVGFGVRRRHRCFVVTARARSFLYHQVRLMVGVLKAVGTGDLTVGDVERILEAKNVNSASPMAPACGLYLGHVKY

Arabidopsis top hitse value%identityAlignment
AT1G09800.1 Pseudouridine synthase family protein3.4e-12863.64Show/hide
Query:  MTENQKHGLEFSFDSSSQRPLKIGKTADEVLRGDEE--------EAEPMNR-NPGIQRYLVAVEYIGTRFSGSQKQPTCRTVVGVLEEAFQKFIGQPVSV
        M++N KH L+ +  +S +   ++ K A      DEE        + E MN  NP +QRYLVA+EYIGTRFSGSQ+Q   RTVVGVL+EAF KFIGQPV +
Subjt:  MTENQKHGLEFSFDSSSQRPLKIGKTADEVLRGDEE--------EAEPMNR-NPGIQRYLVAVEYIGTRFSGSQKQPTCRTVVGVLEEAFQKFIGQPVSV

Query:  FCSSRTDAGVHALSNVCHVDVERLSKRKPGEVLPPHEPGVVHRAVNHFLQKHEGDVTVVDVRSVPNDFHARYKAQERTYFYRLVSGPEALLSFEKDRAWH
        FCSSRTDAGVHALSNVCHVDVER+SKRKPGEVLPPHEPGVV RAVNHFLQ+ +GDV V+DVR VP+++HARYKAQERTYFYRL+SG + L   EKDR WH
Subjt:  FCSSRTDAGVHALSNVCHVDVERLSKRKPGEVLPPHEPGVVHRAVNHFLQKHEGDVTVVDVRSVPNDFHARYKAQERTYFYRLVSGPEALLSFEKDRAWH

Query:  VPETLNIGAMQEACKVLVGHHDFSSFRAAGCQANSPIRTLDELDVCEVVSTPYFPTSMER---KQRQGKEEGENEVPHSETFEV--------------GF
        VPE LN+  MQEAC+VLVG HDFSSFRAAGCQA SP+R+LDEL++ EV STPYFP+  ER       G     +  P SET  V               F
Subjt:  VPETLNIGAMQEACKVLVGHHDFSSFRAAGCQANSPIRTLDELDVCEVVSTPYFPTSMER---KQRQGKEEGENEVPHSETFEV--------------GF

Query:  GVRRRHRCFVVTARARSFLYHQVRLMVGVLKAVGTGDLTVGDVERILEAKNVNSASPMAPACGLYLGHVKYDLP
        G RRRHRC+VVTAR+R FLYHQVRL+VG LK VGTG+LTV DVERILEAK V++A PMAPA GLYL  V+Y+ P
Subjt:  GVRRRHRCFVVTARARSFLYHQVRLMVGVLKAVGTGDLTVGDVERILEAKNVNSASPMAPACGLYLGHVKYDLP

AT1G34150.1 Pseudouridine synthase family protein2.2e-1024.65Show/hide
Query:  QRYL-VAVEYIGTRFSG----SQKQPTCRTVVGVLEEAFQKFIGQPVSVFCS--SRTDAGVHALSNVCHVDVERLSKRKPGEVLPPHEPGVVHRAVNHFL
        +RY+ + + Y G RF G    +Q +P+  + V    E  +  +G       S   RTD GV +   V  + +    K  PG+           R    ++
Subjt:  QRYL-VAVEYIGTRFSG----SQKQPTCRTVVGVLEEAFQKFIGQPVSVFCS--SRTDAGVHALSNVCHVDVERLSKRKPGEVLPPHEPGVVHRAVNHFL

Query:  ----QKHEGDVTVVDVRSVPNDFHARYKAQERTYFYRLVSGPEALLSFEKDRAWHVPETLNIGAMQEACKVLVGHHDFSSFRAAGCQANSPIRTLDELDV
            +    D+ V+     P DFHAR+    R Y Y                 W   + LN+ AM  A K  +G HDF +F    C          ++DV
Subjt:  ----QKHEGDVTVVDVRSVPNDFHARYKAQERTYFYRLVSGPEALLSFEKDRAWHVPETLNIGAMQEACKVLVGHHDFSSFRAAGCQANSPIRTLDELDV

Query:  CEVVSTPYFPTSMERKQRQGKEEGENEVPHSETFEVGFGVRRRHRCFVVTARARSFLYHQVRLMVGVLKAVGTGDLTVGDVERILEAK
          V       T  E    Q   EG+                   +    T R  +FL+HQ+R MV VL  +G G  +V  ++ +L+ K
Subjt:  CEVVSTPYFPTSMERKQRQGKEEGENEVPHSETFEVGFGVRRRHRCFVVTARARSFLYHQVRLMVGVLKAVGTGDLTVGDVERILEAK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGGAAAACCAGAAGCACGGGCTAGAATTCAGTTTTGATTCATCATCTCAAAGGCCCTTGAAAATTGGAAAGACTGCAGACGAAGTTCTCCGCGGCGACGAG
GAGGAAGCAGAACCCATGAACCGTAACCCTGGAATTCAACGCTACCTTGTCGCAGTCGAATATATAGGAACTCGTTTTTCTGGGTCTCAGAAGCAGCCGACCTGC
CGTACGGTGGTTGGCGTGCTTGAGGAAGCGTTCCAGAAGTTTATCGGCCAACCAGTCTCAGTGTTTTGTTCCAGCAGAACTGATGCTGGAGTACACGCCTTGTCA
AATGTTTGTCATGTTGATGTTGAGCGCTTAAGCAAAAGAAAGCCTGGAGAAGTGTTACCACCTCATGAACCGGGAGTGGTTCATAGGGCCGTGAATCATTTCTTA
CAGAAACATGAAGGTGATGTTACAGTAGTTGATGTTCGAAGTGTTCCCAATGATTTTCATGCTAGATATAAAGCTCAAGAGCGTACATACTTTTATCGGTTAGTT
TCTGGGCCAGAAGCTCTGTTAAGCTTTGAGAAGGATCGAGCATGGCACGTGCCTGAGACACTGAATATTGGGGCAATGCAGGAGGCATGCAAAGTGCTTGTTGGG
CATCATGATTTTAGCTCCTTCAGGGCAGCTGGTTGTCAGGCAAACTCACCAATCAGAACTCTGGATGAACTAGACGTTTGTGAGGTGGTTTCAACTCCTTATTTT
CCAACATCAATGGAGCGAAAGCAAAGGCAGGGCAAAGAGGAAGGTGAGAATGAAGTGCCACATTCAGAAACTTTTGAGGTTGGATTTGGAGTCAGGAGAAGACAT
CGTTGTTTTGTGGTGACAGCACGAGCACGCTCTTTTCTCTATCATCAGGTGAGACTAATGGTTGGAGTTCTTAAAGCGGTTGGCACCGGAGATCTAACCGTAGGA
GATGTAGAAAGAATCTTGGAAGCGAAGAATGTGAATTCAGCAAGCCCAATGGCTCCTGCTTGCGGACTCTACCTCGGCCATGTCAAATATGATCTACCGCCAGCT
TCCCCCGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGACGGAAAACCAGAAGCACGGGCTAGAATTCAGTTTTGATTCATCATCTCAAAGGCCCTTGAAAATTGGAAAGACTGCAGACGAAGTTCTCCGCGGCGACGAG
GAGGAAGCAGAACCCATGAACCGTAACCCTGGAATTCAACGCTACCTTGTCGCAGTCGAATATATAGGAACTCGTTTTTCTGGGTCTCAGAAGCAGCCGACCTGC
CGTACGGTGGTTGGCGTGCTTGAGGAAGCGTTCCAGAAGTTTATCGGCCAACCAGTCTCAGTGTTTTGTTCCAGCAGAACTGATGCTGGAGTACACGCCTTGTCA
AATGTTTGTCATGTTGATGTTGAGCGCTTAAGCAAAAGAAAGCCTGGAGAAGTGTTACCACCTCATGAACCGGGAGTGGTTCATAGGGCCGTGAATCATTTCTTA
CAGAAACATGAAGGTGATGTTACAGTAGTTGATGTTCGAAGTGTTCCCAATGATTTTCATGCTAGATATAAAGCTCAAGAGCGTACATACTTTTATCGGTTAGTT
TCTGGGCCAGAAGCTCTGTTAAGCTTTGAGAAGGATCGAGCATGGCACGTGCCTGAGACACTGAATATTGGGGCAATGCAGGAGGCATGCAAAGTGCTTGTTGGG
CATCATGATTTTAGCTCCTTCAGGGCAGCTGGTTGTCAGGCAAACTCACCAATCAGAACTCTGGATGAACTAGACGTTTGTGAGGTGGTTTCAACTCCTTATTTT
CCAACATCAATGGAGCGAAAGCAAAGGCAGGGCAAAGAGGAAGGTGAGAATGAAGTGCCACATTCAGAAACTTTTGAGGTTGGATTTGGAGTCAGGAGAAGACAT
CGTTGTTTTGTGGTGACAGCACGAGCACGCTCTTTTCTCTATCATCAGGTGAGACTAATGGTTGGAGTTCTTAAAGCGGTTGGCACCGGAGATCTAACCGTAGGA
GATGTAGAAAGAATCTTGGAAGCGAAGAATGTGAATTCAGCAAGCCCAATGGCTCCTGCTTGCGGACTCTACCTCGGCCATGTCAAATATGATCTACCGCCAGCT
TCCCCCGAATGA
Protein sequenceShow/hide protein sequence
MTENQKHGLEFSFDSSSQRPLKIGKTADEVLRGDEEEAEPMNRNPGIQRYLVAVEYIGTRFSGSQKQPTCRTVVGVLEEAFQKFIGQPVSVFCSSRTDAGVHALS
NVCHVDVERLSKRKPGEVLPPHEPGVVHRAVNHFLQKHEGDVTVVDVRSVPNDFHARYKAQERTYFYRLVSGPEALLSFEKDRAWHVPETLNIGAMQEACKVLVG
HHDFSSFRAAGCQANSPIRTLDELDVCEVVSTPYFPTSMERKQRQGKEEGENEVPHSETFEVGFGVRRRHRCFVVTARARSFLYHQVRLMVGVLKAVGTGDLTVG
DVERILEAKNVNSASPMAPACGLYLGHVKYDLPPASPE