; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC11G220930 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC11G220930
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionRanBP2-type zinc finger protein
Genome locationCicolChr11:25369791..25377966
RNA-Seq ExpressionCcUC11G220930
SyntenyCcUC11G220930
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001876 - Zinc finger, RanBP2-type
IPR036443 - Zinc finger, RanBP2-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034188.1 ranBP2-type zinc finger protein [Cucumis melo var. makuwa]2.3e-15594.74Show/hide
Query:  MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPIQAPQGYSYSAPYMGSGAHSSMYPGVPPYGSSIFNGS
        MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKP+QAPQGYSYSAPYMGSGA SSMYPGVPPYGSSIFNGS
Subjt:  MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPIQAPQGYSYSAPYMGSGAHSSMYPGVPPYGSSIFNGS

Query:  SIPPYDVPFSGGSAYHYNYGNRFSAGSPYRPLHLSGPAPYS-------SAVYGMPPIMDRYGMALPMGPGAMGPRPGFFPDDMSQKKGADTTRDNDWACP
        SIPPYDVPFSGGSAYHYNYG+RFSAGSPYRPLHLSGPAPYS       SAVYG+PPIMDRYGMALPMGPGAMGPRPGFFPD+MSQKKGADTTRDNDWACP
Subjt:  SIPPYDVPFSGGSAYHYNYGNRFSAGSPYRPLHLSGPAPYS-------SAVYGMPPIMDRYGMALPMGPGAMGPRPGFFPDDMSQKKGADTTRDNDWACP

Query:  KCGNINFSFRTVCNMRKCNTPKPGSQGSKNDKSSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPSPAQDENDQ
        KCGNINFSFRTVCNMRKCNTPKPGSQ SKNDKSSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPA+SEKSPSPAQ+ENDQ
Subjt:  KCGNINFSFRTVCNMRKCNTPKPGSQGSKNDKSSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPSPAQDENDQ

KAG6573592.1 RanBP2-type zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia]1.0e-16084.73Show/hide
Query:  TAFVLPFTRRASP--------FPTEKKFHAAIPVQEQDLSVIVFLIGRNMSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPR
        TAF+ P T+R S              ++     VQEQDL ++VFLIGRNMSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPR
Subjt:  TAFVLPFTRRASP--------FPTEKKFHAAIPVQEQDLSVIVFLIGRNMSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPR

Query:  PADHNSKSAAKPIQAPQGYSYSAPYMGSGAHSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYGNRFSAGSPYRPLHLSGPAPYS-------SAV
        PADHNSKSAAKP+ APQGYSYSAPYMGSGA SSMYPG+PPYGSSIFNGSSIPPYDVPFSGGSAYHYNYG+RFSAGSPYRPLHLSGPAPYS       SAV
Subjt:  PADHNSKSAAKPIQAPQGYSYSAPYMGSGAHSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYGNRFSAGSPYRPLHLSGPAPYS-------SAV

Query:  YGMPPIMDRYGMALPMGPGAMGPRPGFFPDDMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQGSKNDKSSKQKTPEGSWKCEKCNNI
        YGMPPIMDRYG+ALPMGPG MGPRPGFFPDDMSQKKGAD TRDNDW CPKCGNINFSFRTVCNMRKCNTPKPGSQG KNDK SKQKTPEGSWKCEKCNNI
Subjt:  YGMPPIMDRYGMALPMGPGAMGPRPGFFPDDMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQGSKNDKSSKQKTPEGSWKCEKCNNI

Query:  NYPFRTKCNRQNCGADKPADSEKSPSPAQDENDQ
        NYPFRTKCNRQNCGADKPA+SEKSPSPAQDE+++
Subjt:  NYPFRTKCNRQNCGADKPADSEKSPSPAQDENDQ

TYK15732.1 ranBP2-type zinc finger protein [Cucumis melo var. makuwa]2.3e-15594.74Show/hide
Query:  MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPIQAPQGYSYSAPYMGSGAHSSMYPGVPPYGSSIFNGS
        MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKP+QAPQGYSYSAPYMGSGA SSMYPGVPPYGSSIFNGS
Subjt:  MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPIQAPQGYSYSAPYMGSGAHSSMYPGVPPYGSSIFNGS

Query:  SIPPYDVPFSGGSAYHYNYGNRFSAGSPYRPLHLSGPAPYS-------SAVYGMPPIMDRYGMALPMGPGAMGPRPGFFPDDMSQKKGADTTRDNDWACP
        SIPPYDVPFSGGSAYHYNYG+RFSAGSPYRPLHLSGPAPYS       SAVYG+PPIMDRYGMALPMGPGAMGPRPGFFPD+MSQKKGADTTRDNDWACP
Subjt:  SIPPYDVPFSGGSAYHYNYGNRFSAGSPYRPLHLSGPAPYS-------SAVYGMPPIMDRYGMALPMGPGAMGPRPGFFPDDMSQKKGADTTRDNDWACP

Query:  KCGNINFSFRTVCNMRKCNTPKPGSQGSKNDKSSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPSPAQDENDQ
        KCGNINFSFRTVCNMRKCNTPKPGSQ SKNDKSSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPA+SEKSPSPAQ+ENDQ
Subjt:  KCGNINFSFRTVCNMRKCNTPKPGSQGSKNDKSSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPSPAQDENDQ

XP_004135329.1 ranBP2-type zinc finger protein At1g67325 [Cucumis sativus]2.3e-15594.74Show/hide
Query:  MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPIQAPQGYSYSAPYMGSGAHSSMYPGVPPYGSSIFNGS
        MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKP+QAPQGYSYSAPYMGSGA SSMYPGVPPYGSSIFNGS
Subjt:  MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPIQAPQGYSYSAPYMGSGAHSSMYPGVPPYGSSIFNGS

Query:  SIPPYDVPFSGGSAYHYNYGNRFSAGSPYRPLHLSGPAPYS-------SAVYGMPPIMDRYGMALPMGPGAMGPRPGFFPDDMSQKKGADTTRDNDWACP
        SIPPYDVPFSGGSAYHYNYG+RFSAGSPYRPLHLSGPAPYS       SAVYG+PPIMDRYGMALPMGPGAMGPRPGFFPD+MSQKKGADTTRDNDWACP
Subjt:  SIPPYDVPFSGGSAYHYNYGNRFSAGSPYRPLHLSGPAPYS-------SAVYGMPPIMDRYGMALPMGPGAMGPRPGFFPDDMSQKKGADTTRDNDWACP

Query:  KCGNINFSFRTVCNMRKCNTPKPGSQGSKNDKSSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPSPAQDENDQ
        KCGNINFSFRTVCNMRKCNTPKPGSQ SKNDKSSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPA+SEKSPSPAQ+ENDQ
Subjt:  KCGNINFSFRTVCNMRKCNTPKPGSQGSKNDKSSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPSPAQDENDQ

XP_038893077.1 ranBP2-type zinc finger protein At1g67325 [Benincasa hispida]1.0e-15595.44Show/hide
Query:  MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPIQAPQGYSYSAPYMGSGAHSSMYPGVPPYGSSIFNGS
        MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPIQAPQGYSYSAPYMGSGA SSMYPGVPPYGSSIFNGS
Subjt:  MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPIQAPQGYSYSAPYMGSGAHSSMYPGVPPYGSSIFNGS

Query:  SIPPYDVPFSGGSAYHYNYGNRFSAGSPYRPLHLSGPAPYS-------SAVYGMPPIMDRYGMALPMGPGAMGPRPGFFPDDMSQKKGADTTRDNDWACP
        SIPPYDVPFSGGSAYHYNY +RFSAGSPYRPLHLSGPAPYS       SAVYGMPPIMDRYGMALPMGPGAMGPRPGFFPDD+SQKKGADTTRDNDWACP
Subjt:  SIPPYDVPFSGGSAYHYNYGNRFSAGSPYRPLHLSGPAPYS-------SAVYGMPPIMDRYGMALPMGPGAMGPRPGFFPDDMSQKKGADTTRDNDWACP

Query:  KCGNINFSFRTVCNMRKCNTPKPGSQGSKNDKSSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPSPAQDENDQ
        KCGNINFSFRTVCNMRKCNTPKPGSQG KNDKSSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPSPAQ+ENDQ
Subjt:  KCGNINFSFRTVCNMRKCNTPKPGSQGSKNDKSSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPSPAQDENDQ

TrEMBL top hitse value%identityAlignment
A0A0A0KPV4 Uncharacterized protein1.1e-15594.74Show/hide
Query:  MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPIQAPQGYSYSAPYMGSGAHSSMYPGVPPYGSSIFNGS
        MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKP+QAPQGYSYSAPYMGSGA SSMYPGVPPYGSSIFNGS
Subjt:  MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPIQAPQGYSYSAPYMGSGAHSSMYPGVPPYGSSIFNGS

Query:  SIPPYDVPFSGGSAYHYNYGNRFSAGSPYRPLHLSGPAPYS-------SAVYGMPPIMDRYGMALPMGPGAMGPRPGFFPDDMSQKKGADTTRDNDWACP
        SIPPYDVPFSGGSAYHYNYG+RFSAGSPYRPLHLSGPAPYS       SAVYG+PPIMDRYGMALPMGPGAMGPRPGFFPD+MSQKKGADTTRDNDWACP
Subjt:  SIPPYDVPFSGGSAYHYNYGNRFSAGSPYRPLHLSGPAPYS-------SAVYGMPPIMDRYGMALPMGPGAMGPRPGFFPDDMSQKKGADTTRDNDWACP

Query:  KCGNINFSFRTVCNMRKCNTPKPGSQGSKNDKSSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPSPAQDENDQ
        KCGNINFSFRTVCNMRKCNTPKPGSQ SKNDKSSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPA+SEKSPSPAQ+ENDQ
Subjt:  KCGNINFSFRTVCNMRKCNTPKPGSQGSKNDKSSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPSPAQDENDQ

A0A1S3BE27 ranBP2-type zinc finger protein At1g673251.1e-15594.74Show/hide
Query:  MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPIQAPQGYSYSAPYMGSGAHSSMYPGVPPYGSSIFNGS
        MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKP+QAPQGYSYSAPYMGSGA SSMYPGVPPYGSSIFNGS
Subjt:  MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPIQAPQGYSYSAPYMGSGAHSSMYPGVPPYGSSIFNGS

Query:  SIPPYDVPFSGGSAYHYNYGNRFSAGSPYRPLHLSGPAPYS-------SAVYGMPPIMDRYGMALPMGPGAMGPRPGFFPDDMSQKKGADTTRDNDWACP
        SIPPYDVPFSGGSAYHYNYG+RFSAGSPYRPLHLSGPAPYS       SAVYG+PPIMDRYGMALPMGPGAMGPRPGFFPD+MSQKKGADTTRDNDWACP
Subjt:  SIPPYDVPFSGGSAYHYNYGNRFSAGSPYRPLHLSGPAPYS-------SAVYGMPPIMDRYGMALPMGPGAMGPRPGFFPDDMSQKKGADTTRDNDWACP

Query:  KCGNINFSFRTVCNMRKCNTPKPGSQGSKNDKSSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPSPAQDENDQ
        KCGNINFSFRTVCNMRKCNTPKPGSQ SKNDKSSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPA+SEKSPSPAQ+ENDQ
Subjt:  KCGNINFSFRTVCNMRKCNTPKPGSQGSKNDKSSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPSPAQDENDQ

A0A5A7SU69 RanBP2-type zinc finger protein1.1e-15594.74Show/hide
Query:  MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPIQAPQGYSYSAPYMGSGAHSSMYPGVPPYGSSIFNGS
        MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKP+QAPQGYSYSAPYMGSGA SSMYPGVPPYGSSIFNGS
Subjt:  MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPIQAPQGYSYSAPYMGSGAHSSMYPGVPPYGSSIFNGS

Query:  SIPPYDVPFSGGSAYHYNYGNRFSAGSPYRPLHLSGPAPYS-------SAVYGMPPIMDRYGMALPMGPGAMGPRPGFFPDDMSQKKGADTTRDNDWACP
        SIPPYDVPFSGGSAYHYNYG+RFSAGSPYRPLHLSGPAPYS       SAVYG+PPIMDRYGMALPMGPGAMGPRPGFFPD+MSQKKGADTTRDNDWACP
Subjt:  SIPPYDVPFSGGSAYHYNYGNRFSAGSPYRPLHLSGPAPYS-------SAVYGMPPIMDRYGMALPMGPGAMGPRPGFFPDDMSQKKGADTTRDNDWACP

Query:  KCGNINFSFRTVCNMRKCNTPKPGSQGSKNDKSSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPSPAQDENDQ
        KCGNINFSFRTVCNMRKCNTPKPGSQ SKNDKSSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPA+SEKSPSPAQ+ENDQ
Subjt:  KCGNINFSFRTVCNMRKCNTPKPGSQGSKNDKSSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPSPAQDENDQ

A0A5D3CW31 RanBP2-type zinc finger protein1.1e-15594.74Show/hide
Query:  MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPIQAPQGYSYSAPYMGSGAHSSMYPGVPPYGSSIFNGS
        MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKP+QAPQGYSYSAPYMGSGA SSMYPGVPPYGSSIFNGS
Subjt:  MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPIQAPQGYSYSAPYMGSGAHSSMYPGVPPYGSSIFNGS

Query:  SIPPYDVPFSGGSAYHYNYGNRFSAGSPYRPLHLSGPAPYS-------SAVYGMPPIMDRYGMALPMGPGAMGPRPGFFPDDMSQKKGADTTRDNDWACP
        SIPPYDVPFSGGSAYHYNYG+RFSAGSPYRPLHLSGPAPYS       SAVYG+PPIMDRYGMALPMGPGAMGPRPGFFPD+MSQKKGADTTRDNDWACP
Subjt:  SIPPYDVPFSGGSAYHYNYGNRFSAGSPYRPLHLSGPAPYS-------SAVYGMPPIMDRYGMALPMGPGAMGPRPGFFPDDMSQKKGADTTRDNDWACP

Query:  KCGNINFSFRTVCNMRKCNTPKPGSQGSKNDKSSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPSPAQDENDQ
        KCGNINFSFRTVCNMRKCNTPKPGSQ SKNDKSSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPA+SEKSPSPAQ+ENDQ
Subjt:  KCGNINFSFRTVCNMRKCNTPKPGSQGSKNDKSSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPSPAQDENDQ

A0A6J1DCL2 ranBP2-type zinc finger protein At1g67325 isoform X25.1e-15393.33Show/hide
Query:  MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPIQAPQGYSYSAPYMGSGAHSSMYPGVPPYGSSIFNGS
        MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKP+QAPQGYSYSAPYMGSGA SS+YPGVPPYGSSIFNGS
Subjt:  MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPIQAPQGYSYSAPYMGSGAHSSMYPGVPPYGSSIFNGS

Query:  SIPPYDVPFSGGSAYHYNYGNRFSAGSPYRPLHLSGPAPYS-------SAVYGMPPIMDRYGMALPMGPGAMGPRPGFFPDDMSQKKGADTTRDNDWACP
        SIPPYDVPFSGGSAYHYNY +RFSAGSPYRPLHLSGPAPYS       SAVYGMPP++DRYGMALPMGP  MGPRPGFFPDDM QKK ADTTRDNDWACP
Subjt:  SIPPYDVPFSGGSAYHYNYGNRFSAGSPYRPLHLSGPAPYS-------SAVYGMPPIMDRYGMALPMGPGAMGPRPGFFPDDMSQKKGADTTRDNDWACP

Query:  KCGNINFSFRTVCNMRKCNTPKPGSQGSKNDKSSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPSPAQDENDQ
        KCGNINFSFRTVCNMRKCNTPKPGSQGSKNDKSSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPSPAQ+ENDQ
Subjt:  KCGNINFSFRTVCNMRKCNTPKPGSQGSKNDKSSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPSPAQDENDQ

SwissProt top hitse value%identityAlignment
Q8GZ43 RanBP2-type zinc finger protein At1g673259.0e-11571.03Show/hide
Query:  MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPIQAPQGYSYSAPYMGSGAHSSMYPGVPPYGSSIFNGS
        MSQVD+RNSSAAKRARTDG RREDDW CPSCGNVNFSFRTTCNMRNCTQPRPADHN KSA KP+Q  QG+S    Y+GSG    +Y G  PYGS +FNGS
Subjt:  MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPIQAPQGYSYSAPYMGSGAHSSMYPGVPPYGSSIFNGS

Query:  SIPPYDVPFSGGSAYHYNYGNRFSAGSPYRPLHLSGPAPY-------SSAVYGMPPIMDRYGMALPMGPG---AMGPRPGFFPDDMSQKKGADTTRDNDW
        S+PPYDVPFSGGS YH+NY +R  AG+ YRPLH+SGP PY       S  +YGMPP +DRYG+ + MGPG   AM PRP F+PD+ SQK+  D+TRDNDW
Subjt:  SIPPYDVPFSGGSAYHYNYGNRFSAGSPYRPLHLSGPAPY-------SSAVYGMPPIMDRYGMALPMGPG---AMGPRPGFFPDDMSQKKGADTTRDNDW

Query:  ACPKCGNINFSFRTVCNMRKCNTPKPGS-QGSKNDKSSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAD-SEKSPSPAQDENDQ
         CP CGN+NFSFRTVCNMRKCNTPKPGS QG  +DK SKQ  PEGSWKC+ C NINYPFR+KCNRQNCGADKP D S  SPS A +ENDQ
Subjt:  ACPKCGNINFSFRTVCNMRKCNTPKPGS-QGSKNDKSSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAD-SEKSPSPAQDENDQ

Q9AST1 Transcription initiation factor TFIID subunit 159.9e-0549.15Show/hide
Query:  GPGAMGPRPGFFPDDMSQKKGADT--TRDNDWACPKCGNINFSFRTVCNMRKCNTPKPG
        G GA G  PG       Q  GA T     NDWACP CGN+N++ R  CN+  CNT KPG
Subjt:  GPGAMGPRPGFFPDDMSQKKGADT--TRDNDWACPKCGNINFSFRTVCNMRKCNTPKPG

Arabidopsis top hitse value%identityAlignment
AT1G50300.1 TBP-associated factor 157.1e-0649.15Show/hide
Query:  GPGAMGPRPGFFPDDMSQKKGADT--TRDNDWACPKCGNINFSFRTVCNMRKCNTPKPG
        G GA G  PG       Q  GA T     NDWACP CGN+N++ R  CN+  CNT KPG
Subjt:  GPGAMGPRPGFFPDDMSQKKGADT--TRDNDWACPKCGNINFSFRTVCNMRKCNTPKPG

AT1G67325.1 Ran BP2/NZF zinc finger-like superfamily protein2.6e-11771.28Show/hide
Query:  MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPIQAPQGYSYSAPYMGSGAHSSMYPGVPPYGSSIFNGS
        MSQVD+RNSSAAKRARTDG RREDDW CPSCGNVNFSFRTTCNMRNCTQPRPADHN KSA KP+Q  QG+S    Y+GSG    +Y G  PYGS +FNGS
Subjt:  MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPIQAPQGYSYSAPYMGSGAHSSMYPGVPPYGSSIFNGS

Query:  SIPPYDVPFSGGSAYHYNYGNRFSAGSPYRPLHLSGPAPY-------SSAVYGMPPIMDRYGMALPMGPG---AMGPRPGFFPDDMSQKKGADTTRDNDW
        S+PPYDVPFSGGS YH+NY +R  AG+ YRPLH+SGP PY       S  +YGMPP +DRYG+ + MGPG   AM PRP F+PD+ SQK+  D+TRDNDW
Subjt:  SIPPYDVPFSGGSAYHYNYGNRFSAGSPYRPLHLSGPAPY-------SSAVYGMPPIMDRYGMALPMGPG---AMGPRPGFFPDDMSQKKGADTTRDNDW

Query:  ACPKCGNINFSFRTVCNMRKCNTPKPGSQGSKNDKSSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAD-SEKSPSPAQDENDQ
         CP CGN+NFSFRTVCNMRKCNTPKPGSQG  +DK SKQ  PEGSWKC+ C NINYPFR+KCNRQNCGADKP D S  SPS A +ENDQ
Subjt:  ACPKCGNINFSFRTVCNMRKCNTPKPGSQGSKNDKSSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAD-SEKSPSPAQDENDQ

AT1G67325.2 Ran BP2/NZF zinc finger-like superfamily protein6.4e-11671.03Show/hide
Query:  MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPIQAPQGYSYSAPYMGSGAHSSMYPGVPPYGSSIFNGS
        MSQVD+RNSSAAKRARTDG RREDDW CPSCGNVNFSFRTTCNMRNCTQPRPADHN KSA KP+Q  QG+S    Y+GSG    +Y G  PYGS +FNGS
Subjt:  MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPIQAPQGYSYSAPYMGSGAHSSMYPGVPPYGSSIFNGS

Query:  SIPPYDVPFSGGSAYHYNYGNRFSAGSPYRPLHLSGPAPY-------SSAVYGMPPIMDRYGMALPMGPG---AMGPRPGFFPDDMSQKKGADTTRDNDW
        S+PPYDVPFSGGS YH+NY +R  AG+ YRPLH+SGP PY       S  +YGMPP +DRYG+ + MGPG   AM PRP F+PD+ SQK+  D+TRDNDW
Subjt:  SIPPYDVPFSGGSAYHYNYGNRFSAGSPYRPLHLSGPAPY-------SSAVYGMPPIMDRYGMALPMGPG---AMGPRPGFFPDDMSQKKGADTTRDNDW

Query:  ACPKCGNINFSFRTVCNMRKCNTPKPGS-QGSKNDKSSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAD-SEKSPSPAQDENDQ
         CP CGN+NFSFRTVCNMRKCNTPKPGS QG  +DK SKQ  PEGSWKC+ C NINYPFR+KCNRQNCGADKP D S  SPS A +ENDQ
Subjt:  ACPKCGNINFSFRTVCNMRKCNTPKPGS-QGSKNDKSSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAD-SEKSPSPAQDENDQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAACGAACAAATTCTGGCAGCCCACTTGCGCTCATTCACGCAACAAAACGGCGTTCGTACTCCCTTTTACCCGACGAGCATCGCCGTTTCCGACTGAAAAA
AAGTTCCACGCAGCTATTCCGGTCCAAGAACAAGATCTCTCCGTCATCGTCTTCCTGATAGGTCGCAATATGTCCCAGGTTGATAGCAGGAATTCCTCTGCGGCC
AAACGTGCTAGAACTGATGGTAGCCGAAGGGAAGATGATTGGACTTGCCCTAGTTGTGGAAACGTCAATTTTTCATTTAGAACAACTTGCAATATGCGCAATTGC
ACTCAGCCACGTCCTGCTGATCATAATTCTAAATCTGCTGCCAAGCCCATTCAAGCTCCTCAGGGTTACTCCTATTCTGCCCCTTACATGGGGTCAGGTGCACAC
TCTTCAATGTATCCTGGTGTACCGCCATATGGTTCTTCCATATTCAATGGTTCATCTATACCTCCCTATGATGTGCCATTTTCTGGGGGATCAGCATATCATTAC
AACTACGGCAACCGGTTTTCTGCGGGCAGCCCCTACAGACCCTTGCACTTATCTGGGCCTGCACCTTATTCAAGTGCAGTGTATGGTATGCCACCCATAATGGAT
CGCTATGGCATGGCTTTGCCAATGGGCCCTGGTGCCATGGGTCCAAGGCCTGGTTTTTTTCCAGATGATATGTCTCAGAAGAAGGGTGCAGACACTACTCGCGAC
AATGATTGGGCATGTCCAAAATGTGGAAATATCAACTTCTCATTTAGAACTGTTTGTAACATGAGGAAGTGCAATACACCGAAACCTGGGTCACAGGGTTCCAAA
AATGACAAAAGTTCTAAGCAAAAGACGCCAGAGGGTAGCTGGAAATGTGAGAAATGTAACAACATAAATTATCCATTCCGAACCAAGTGCAACAGACAAAATTGT
GGAGCAGACAAGCCAGCGGATTCAGAGAAATCCCCATCACCAGCACAAGATGAAAATGATCAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAACGAACAAATTCTGGCAGCCCACTTGCGCTCATTCACGCAACAAAACGGCGTTCGTACTCCCTTTTACCCGACGAGCATCGCCGTTTCCGACTGAAAAA
AAGTTCCACGCAGCTATTCCGGTCCAAGAACAAGATCTCTCCGTCATCGTCTTCCTGATAGGTCGCAATATGTCCCAGGTTGATAGCAGGAATTCCTCTGCGGCC
AAACGTGCTAGAACTGATGGTAGCCGAAGGGAAGATGATTGGACTTGCCCTAGTTGTGGAAACGTCAATTTTTCATTTAGAACAACTTGCAATATGCGCAATTGC
ACTCAGCCACGTCCTGCTGATCATAATTCTAAATCTGCTGCCAAGCCCATTCAAGCTCCTCAGGGTTACTCCTATTCTGCCCCTTACATGGGGTCAGGTGCACAC
TCTTCAATGTATCCTGGTGTACCGCCATATGGTTCTTCCATATTCAATGGTTCATCTATACCTCCCTATGATGTGCCATTTTCTGGGGGATCAGCATATCATTAC
AACTACGGCAACCGGTTTTCTGCGGGCAGCCCCTACAGACCCTTGCACTTATCTGGGCCTGCACCTTATTCAAGTGCAGTGTATGGTATGCCACCCATAATGGAT
CGCTATGGCATGGCTTTGCCAATGGGCCCTGGTGCCATGGGTCCAAGGCCTGGTTTTTTTCCAGATGATATGTCTCAGAAGAAGGGTGCAGACACTACTCGCGAC
AATGATTGGGCATGTCCAAAATGTGGAAATATCAACTTCTCATTTAGAACTGTTTGTAACATGAGGAAGTGCAATACACCGAAACCTGGGTCACAGGGTTCCAAA
AATGACAAAAGTTCTAAGCAAAAGACGCCAGAGGGTAGCTGGAAATGTGAGAAATGTAACAACATAAATTATCCATTCCGAACCAAGTGCAACAGACAAAATTGT
GGAGCAGACAAGCCAGCGGATTCAGAGAAATCCCCATCACCAGCACAAGATGAAAATGATCAGTGAGTTCTAGAACATGTTTGAGGGTTGAGAAGGTCCAGAGTT
ATCTTCCAGCGTTGCTCAATATGGGTGTCTGAAAGTCAGTCTTGTCGTCCTCATGTTGCTGCAGTTGTCAAGTCAGTCTACCTCTCTTGATCCGTGTCAAGTTGT
ATTAACTCAATTTTAGTGCTGGTCTTTTCACTCATTTAATGCACAATTTCATATGATCTGGCAAAAGATTTAATGGTTGGTTTCTGATATTAGGGACATTTTACC
TTTGGAATCCACTTATTTAGTCTAGTGGGCCTGTTAATTTGTGCACTAAAATATGTTGCGAGTAGACTAGACTCTGTACCCTTTTGGGTTGCGGCTTGATCTCTT
CATTGTCTTTGTGCTGTTGGGTGTGCCGAACTGATATTTTTCTAGGACAGTGCCCCAAAGTTCTGAGGATGCATTGGATTAGATAGGATTTACTTTTGTTTTTGG
GTTGGCCTGTTAACGTATGACACTTATTTGGTGGGGTCACGTCATCATTATGGTCAGTAAACTATGTGAGCATGGTTACTGTTTGCATTGCATGGTCGTCAAAAG
TAATGGTTGCCTTCCCAAATGGAGTTTGAAATTGAGACGATGACTTAGGTTATATTTACTAGATTGAATGTAAGTTAGATTGCTATCTGTTTCGGGCTCGCCAAG
GGCCCTTTTCGCCATCAGTATTCTTCTCTCATTTATTAGCTTTTGTCTATCCATGTTCATGCACTGTCTTGAGATGTTCGTGTATCCATGACAGGAATATTTCAT
TACCCAACTATTTGAAGTAGGTTACCTTGTATACTTTGTTTGAAAGTTATCTTTTAGCATCTTCTTGAGACCAGTTAGTTTCTAGAAATAGATAATTCCTAATGT
TAACCTGCGAGGATGTGATGTAGATGAAGGTAAGCTTCAGAGTCTCTTCGAATGGTTATGAGATTACGGTAACATAACATAAGTAGGCATACTGGCAATGTACTT
TATTGTCATTTTCTTCTGTCGTTTCACTTTCTATATTAACTTATTTTTAGGGGGAGGCTGTCTGTGGTGTAGCTTTATTGTTCTTATGGTGTTGCTAACCTCATT
GTCATTATTTAACGTTCTTCATGTTCATTTCATTAACTTTTTTAAGGTAAAGAGTACTTTTGCTTTTGGGTTAAAAATGTACAAGGATTTATGATTTTTGTTCAC
AATTTAAAAAATACTAACGTCATTAAAGTCATACATTTTGTAAAGTTGTGCACATGCATCTTTTGAACATTTTGTTGTTTTATATATGTTTTTGAAAATAGATTT
AAAATTAGTGTACTCTTGAGCTGATTGAAAGATGTATTTTCCAACTATTTTGTTAAATCGTTTAGGAAAATAATTGTTTAAAAGATAAATTTTACAAATAAATAA
TCTTTTTATGTTGAGGAAGGATGATTGGGATGTTTTCAAAAATAGAAAAACTGTGGAAAATAATTACAACTATATCAAAATTTTACTTTCTATCTGATGGACTGT
GATAAACTTAGATAGACATCTATCACTTTATTAGATATGCACGGATGGATATCTTGGTCTATTGCGGTCGATCACGGATAGAAAGTGAATAAATAGTTTGATATT
CTTTTTATTTTATAATAATTTTCTAGGATGATTTATTATTTATATATAAGATTAAAGTTATTTTAAGAGTGAAAATTTAAGCATTATTTTCTCTTGGCCATTGAA
CGTTGGACGCACTTTCTGAAGTTGGACAAGTCAGCATCATCTGTAGTTGAGTTTAGGCTTTCTTTATGTTGGCGAACGTAGTCCTTGCTTGTTATCAATGTTTTT
TTAAAAGAATTTGCCTTGCTTGTGTTATGCTATTAGTTTGGTTTGTTGTTTGTTTTCTAGTAACTAAAATATTACAGTAAACTGCACAATCATTTTTCATTTTCA
TAGTAGAAAGTACAATTACTTATGGGCAGGAGTTGGAAAAAGCTGTGAATTGTTTAATGTTTATGGAAAAGGAATATCTTTTTATTGAAAAATATGTAGAGCTCA
TCTTTTACTCAGTTTAACTTCTATCTAAATTCGTTTTCTGACATTCAAATTATTTAATTTTTTTCTCATCTTTGACTTAATATAATGTAGAAAATATTATTTTAT
AGCCTCTACTTGTCCTTAAAAAAAA
Protein sequenceShow/hide protein sequence
METNKFWQPTCAHSRNKTAFVLPFTRRASPFPTEKKFHAAIPVQEQDLSVIVFLIGRNMSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNC
TQPRPADHNSKSAAKPIQAPQGYSYSAPYMGSGAHSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYGNRFSAGSPYRPLHLSGPAPYSSAVYGMPPIMD
RYGMALPMGPGAMGPRPGFFPDDMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQGSKNDKSSKQKTPEGSWKCEKCNNINYPFRTKCNRQNC
GADKPADSEKSPSPAQDENDQ