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CcUC11G221920 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC11G221920
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
Genome locationCicolChr11:26350327..26351683
RNA-Seq ExpressionCcUC11G221920
SyntenyCcUC11G221920
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
QDF64401.1 hypothetical chloroplast RF21 [Teucrium stocksianum subsp. stenophyllum]2.9e-0496Show/hide
Query:  TNLGFAIPGNIGSGSWDPFLSDRKG
        TNLGFAIPG IGSGSWDPFLSDRKG
Subjt:  TNLGFAIPGNIGSGSWDPFLSDRKG
TrEMBL top hitse value%identityAlignment
A0A4Y6I4X1 Hypothetical chloroplast RF211.4e-0496Show/hide
Query:  TNLGFAIPGNIGSGSWDPFLSDRKG
        TNLGFAIPG IGSGSWDPFLSDRKG
Subjt:  TNLGFAIPGNIGSGSWDPFLSDRKG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTACAAACTTAGGATTTGCGATCCCAGGTAATATCGGTTCAGGATCATGGGATCCTTTTCTATCAGATAGGAAGGGTGTAATACTAATCGATAGGGCCTCA
TTGGTGATTCGATCTCGATTCTCCGATATATATATTAACCCCACCATTGATGAACCGCCACACCTTCGTCTCGGAGCTGGCCGTACAACGCCAAACACTGCCAGT
AAGCTCGGCTGCCGCCGCCGGAGACCTTCCTGCCACCGTTTTTCTGTGGCTTGCATTCCAAGAAAAGTTCGTCGACCAACCGTACGGCCTTGGATTTCATCATAT
CCTCCACAACCTCGGCTTCTGCTTTCATTACGACGTAATCTTCAGCTTTTACGTTATTTGACAGCCAGTCCGATATGCCGACCTGCAGTGCCTTTGAGGATGGCT
CTTGATCGGGTAGTTGATGTCGAACCAGGTTGTACCGCTTCCGCCTTCCTTCTCCGGAACTCCGGCGTCGATGAAAACATGGCGGGGATAGCTTTCGAGAGAATC
GCCCATCAAATCTGGAAGATATCGTGTTCGTTGCAAATACCGCCTCGATTTTCGCGACGCTGCTCGCGGTGGTTCAAGGAGGACATCTTCGAGTTCATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGATTACAAACTTAGGATTTGCGATCCCAGGTAATATCGGTTCAGGATCATGGGATCCTTTTCTATCAGATAGGAAGGGTGTAATACTAATCGATAGGGCCTCA
TTGGTGATTCGATCTCGATTCTCCGATATATATATTAACCCCACCATTGATGAACCGCCACACCTTCGTCTCGGAGCTGGCCGTACAACGCCAAACACTGCCAGT
AAGCTCGGCTGCCGCCGCCGGAGACCTTCCTGCCACCGTTTTTCTGTGGCTTGCATTCCAAGAAAAGTTCGTCGACCAACCGTACGGCCTTGGATTTCATCATAT
CCTCCACAACCTCGGCTTCTGCTTTCATTACGACGTAATCTTCAGCTTTTACGTTATTTGACAGCCAGTCCGATATGCCGACCTGCAGTGCCTTTGAGGATGGCT
CTTGATCGGGTAGTTGATGTCGAACCAGGTTGTACCGCTTCCGCCTTCCTTCTCCGGAACTCCGGCGTCGATGAAAACATGGCGGGGATAGCTTTCGAGAGAATC
GCCCATCAAATCTGGAAGATATCGTGTTCGTTGCAAATACCGCCTCGATTTTCGCGACGCTGCTCGCGGTGGTTCAAGGAGGACATCTTCGAGTTCATTTAG
Protein sequenceShow/hide protein sequence
MITNLGFAIPGNIGSGSWDPFLSDRKGVILIDRASLVIRSRFSDIYINPTIDEPPHLRLGAGRTTPNTASKLGCRRRRPSCHRFSVACIPRKVRRPTVRPWISSY
PPQPRLLLSLRRNLQLLRYLTASPICRPAVPLRMALDRVVDVEPGCTASAFLLRNSGVDENMAGIAFERIAHQIWKISCSLQIPPRFSRRCSRWFKEDIFEFI