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CcUC11G224710 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC11G224710
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionLRR-RLK
Genome locationCicolChr11:29087873..29089345
RNA-Seq ExpressionCcUC11G224710
SyntenyCcUC11G224710
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7056855.1 hypothetical protein CFC21_064228 [Triticum aestivum]5.0e-0661.82Show/hide
Query:  RGSTSSNKRSFSFKVPATRVLICVFSSSSSFAKPKSEILGLRFLSSRTLVALISR
        R + SSN+  F++ VPAT VLICV     SFA PKS+ILGLR LSSR L+AL+SR
Subjt:  RGSTSSNKRSFSFKVPATRVLICVFSSSSSFAKPKSEILGLRFLSSRTLVALISR
TrEMBL top hitse value%identityAlignment
A0A2P2MSY2 LRR-RLK4.5e-0852.24Show/hide
Query:  EQGYCFPNTHILAKVDFLQYNIHKASLDEGAAMQISCLSHSQIHDFLALILKKVVSLQLQCHLQEYP
        EQ YC P T      DFLQ+NIH+A  D     QISC SHSQ H  LALI  +    QL CHL+E P
Subjt:  EQGYCFPNTHILAKVDFLQYNIHKASLDEGAAMQISCLSHSQIHDFLALILKKVVSLQLQCHLQEYP
A0A3B6KBF8 Uncharacterized protein2.4e-0661.82Show/hide
Query:  RGSTSSNKRSFSFKVPATRVLICVFSSSSSFAKPKSEILGLRFLSSRTLVALISR
        R + SSN+  F++ VPAT VLICV     SFA PKS+ILGLR LSSR L+AL+SR
Subjt:  RGSTSSNKRSFSFKVPATRVLICVFSSSSSFAKPKSEILGLRFLSSRTLVALISR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCAAACTTTGCGTCTGGCTTACACTCGTTGTTTCCCCTTTCTGGCGATAAATCTGGCTCCACATTGCATTCACATCTTGTTTTGAGACACTGGGATCTGAAACCACCTCC
TTCACAACAACCTTCCCCTCCAGCATGCTCACCACTGATGACATGGCAGGCCTGTCACCAGCAACAACAGCCTAACCGTGGATCGACAAGCTCTAATAAACGGTCTTTCT
CTTTTAAAGTTCCAGCAACCCGGGTGCTGATATGTGTATTTTCTTCTTCATCCAGCTTTGCCAAACCGAAGTCAGAAATCTTGGGGTTGAGATTTTTATCGAGTAGAACA
TTGGTAGCTTTGATATCTCGGCCCGAGCAAGGCTATTGTTTTCCAAATACTCATATATTAGCAAAAGTTGATTTCCTTCAATACAACATCCATAAAGCTTCACTAGATGA
GGGTGCTGCAATGCAGATATCATGCCTATCTCATTCACAAATTCACGATTTCCTTGCTTTGATTTTGAAGAAAGTTGTTTCACTGCAATTACAGTGCCATCTGCAAGAAT
ACCCTGCAATTCAAAATACAGAACTTCACACCAAAATATAA
mRNA sequenceShow/hide mRNA sequence
TCAAACTTTGCGTCTGGCTTACACTCGTTGTTTCCCCTTTCTGGCGATAAATCTGGCTCCACATTGCATTCACATCTTGTTTTGAGACACTGGGATCTGAAACCACCTCC
TTCACAACAACCTTCCCCTCCAGCATGCTCACCACTGATGACATGGCAGGCCTGTCACCAGCAACAACAGCCTAACCGTGGATCGACAAGCTCTAATAAACGGTCTTTCT
CTTTTAAAGTTCCAGCAACCCGGGTGCTGATATGTGTATTTTCTTCTTCATCCAGCTTTGCCAAACCGAAGTCAGAAATCTTGGGGTTGAGATTTTTATCGAGTAGAACA
TTGGTAGCTTTGATATCTCGGCCCGAGCAAGGCTATTGTTTTCCAAATACTCATATATTAGCAAAAGTTGATTTCCTTCAATACAACATCCATAAAGCTTCACTAGATGA
GGGTGCTGCAATGCAGATATCATGCCTATCTCATTCACAAATTCACGATTTCCTTGCTTTGATTTTGAAGAAAGTTGTTTCACTGCAATTACAGTGCCATCTGCAAGAAT
ACCCTGCAATTCAAAATACAGAACTTCACACCAAAATATAA
Protein sequenceShow/hide protein sequence
SNFASGLHSLFPLSGDKSGSTLHSHLVLRHWDLKPPPSQQPSPPACSPLMTWQACHQQQQPNRGSTSSNKRSFSFKVPATRVLICVFSSSSSFAKPKSEILGLRFLSSRT
LVALISRPEQGYCFPNTHILAKVDFLQYNIHKASLDEGAAMQISCLSHSQIHDFLALILKKVVSLQLQCHLQEYPAIQNTELHTKI