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CcUC11G224950 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC11G224950
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionAT-hook motif nuclear-localized protein
Genome locationCicolChr11:29284961..29285177
RNA-Seq ExpressionCcUC11G224950
SyntenyCcUC11G224950
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003680 - AT DNA binding (molecular function)
InterPro domainsIPR005175 - PPC domain
IPR039605 - AT-hook motif nuclear-localized protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033371.1 AT-hook motif nuclear-localized protein 9-like isoform X1 [Cucumis melo var. makuwa]4.2e-0868Show/hide
Query:  GMFEILRLSGWFVGGDPLKRISISLAKHDG-QVFGGIVASSLIAATPTQV
        GMFEIL+LSGW   GD +K ++IS +K DG QVFGG+VASS+IAATP QV
Subjt:  GMFEILRLSGWFVGGDPLKRISISLAKHDG-QVFGGIVASSLIAATPTQV

XP_004145829.2 AT-hook motif nuclear-localized protein 9 isoform X2 [Cucumis sativus]7.9e-0760.71Show/hide
Query:  GMFEILRLSGWFVGGDPLKRISISLAKHDG--QVFGGIVASSLIAATPTQVSLFSF
        G FEIL+LSGW   GD ++ ++IS +K DG  QVFGG VASSLIAATP Q+ + SF
Subjt:  GMFEILRLSGWFVGGDPLKRISISLAKHDG--QVFGGIVASSLIAATPTQVSLFSF

XP_008458631.1 PREDICTED: AT-hook motif nuclear-localized protein 9-like isoform X1 [Cucumis melo]1.1e-0863.64Show/hide
Query:  GMFEILRLSGWFVGGDPLKRISISLAKHDG-QVFGGIVASSLIAATPTQVSLFSF
        GMFEIL+LSGW   GD +K ++IS +K DG QVFGG+VASS+IAATP Q+ + SF
Subjt:  GMFEILRLSGWFVGGDPLKRISISLAKHDG-QVFGGIVASSLIAATPTQVSLFSF

XP_008458632.1 PREDICTED: AT-hook motif nuclear-localized protein 9-like isoform X2 [Cucumis melo]1.1e-0863.64Show/hide
Query:  GMFEILRLSGWFVGGDPLKRISISLAKHDG-QVFGGIVASSLIAATPTQVSLFSF
        GMFEIL+LSGW   GD +K ++IS +K DG QVFGG+VASS+IAATP Q+ + SF
Subjt:  GMFEILRLSGWFVGGDPLKRISISLAKHDG-QVFGGIVASSLIAATPTQVSLFSF

XP_038900409.1 AT-hook motif nuclear-localized protein 9-like [Benincasa hispida]1.3e-1274.07Show/hide
Query:  GMFEILRLSGWFVGGDPLKRISISLAKHDGQVFGGIVASSLIAATPTQVSLFSF
        G FEIL+LSGWF GGD +KRISIS +K DGQVFGGI+ASSLIAATP Q+ + SF
Subjt:  GMFEILRLSGWFVGGDPLKRISISLAKHDGQVFGGIVASSLIAATPTQVSLFSF

TrEMBL top hitse value%identityAlignment
A0A1S3C8A9 AT-hook motif nuclear-localized protein5.3e-0963.64Show/hide
Query:  GMFEILRLSGWFVGGDPLKRISISLAKHDG-QVFGGIVASSLIAATPTQVSLFSF
        GMFEIL+LSGW   GD +K ++IS +K DG QVFGG+VASS+IAATP Q+ + SF
Subjt:  GMFEILRLSGWFVGGDPLKRISISLAKHDG-QVFGGIVASSLIAATPTQVSLFSF

A0A1S3C8E7 AT-hook motif nuclear-localized protein5.3e-0963.64Show/hide
Query:  GMFEILRLSGWFVGGDPLKRISISLAKHDG-QVFGGIVASSLIAATPTQVSLFSF
        GMFEIL+LSGW   GD +K ++IS +K DG QVFGG+VASS+IAATP Q+ + SF
Subjt:  GMFEILRLSGWFVGGDPLKRISISLAKHDG-QVFGGIVASSLIAATPTQVSLFSF

A0A5D3BDW3 AT-hook motif nuclear-localized protein2.0e-0868Show/hide
Query:  GMFEILRLSGWFVGGDPLKRISISLAKHDG-QVFGGIVASSLIAATPTQV
        GMFEIL+LSGW   GD +K ++IS +K DG QVFGG+VASS+IAATP QV
Subjt:  GMFEILRLSGWFVGGDPLKRISISLAKHDG-QVFGGIVASSLIAATPTQV

A0A6J1K1C1 AT-hook motif nuclear-localized protein3.8e-0761.02Show/hide
Query:  GMFEILRLSGWFVGGDPLKR-----ISISLAKHDGQVFGGIVASSLIAATPTQVSLFSF
        GMFEILR++G FVG    KR     +SISLA  DG+VFGG+VAS+LIAATP Q+ + SF
Subjt:  GMFEILRLSGWFVGGDPLKR-----ISISLAKHDGQVFGGIVASSLIAATPTQVSLFSF

A0A6J1K446 AT-hook motif nuclear-localized protein3.8e-0761.02Show/hide
Query:  GMFEILRLSGWFVGGDPLKR-----ISISLAKHDGQVFGGIVASSLIAATPTQVSLFSF
        GMFEILR++G FVG    KR     +SISLA  DG+VFGG+VAS+LIAATP Q+ + SF
Subjt:  GMFEILRLSGWFVGGDPLKR-----ISISLAKHDGQVFGGIVASSLIAATPTQVSLFSF

SwissProt top hitse value%identityAlignment
A1L4X7 AT-hook motif nuclear-localized protein 142.9e-0444.07Show/hide
Query:  GMFEILRLSGWFV---GGDPLKRISISLAKHDGQVFGGIVASSLIAATPTQVSLFSFPL
        G +EIL LSG ++    G     +S+SL+  DGQ+ GG + S L AA P QV L +F L
Subjt:  GMFEILRLSGWFV---GGDPLKRISISLAKHDGQVFGGIVASSLIAATPTQVSLFSFPL

O49658 AT-hook motif nuclear-localized protein 21.3e-0448.33Show/hide
Query:  GMFEILRLSGWFVGGDP------LKRISISLAKHDGQVFGGIVASSLIAATPTQVSLFSF
        G FEIL LSG F+  D          +S+SLA  DG+V GG VA  L+AATP QV + +F
Subjt:  GMFEILRLSGWFVGGDP------LKRISISLAKHDGQVFGGIVASSLIAATPTQVSLFSF

Q8VYJ2 AT-hook motif nuclear-localized protein 13.8e-0446.67Show/hide
Query:  GMFEILRLSGWFVGGDP------LKRISISLAKHDGQVFGGIVASSLIAATPTQVSLFSF
        G FEIL LSG F+  D          +S+SLA  DG+V GG +A  L+AA+P QV + SF
Subjt:  GMFEILRLSGWFVGGDP------LKRISISLAKHDGQVFGGIVASSLIAATPTQVSLFSF

Q9FHM5 AT-hook motif nuclear-localized protein 45.0e-0448.33Show/hide
Query:  GMFEILRLSGWFV----GGDPLKR--ISISLAKHDGQVFGGIVASSLIAATPTQVSLFSF
        G FEIL L+G F+    GG   +   +S+SLA  DG+VFGG +A   IAA P QV + SF
Subjt:  GMFEILRLSGWFV----GGDPLKR--ISISLAKHDGQVFGGIVASSLIAATPTQVSLFSF

Q9LVB0 AT-hook motif nuclear-localized protein 68.5e-0450Show/hide
Query:  GMFEILRLSGWFV----GGDPLKR--ISISLAKHDGQVFGGIVASSLIAATPTQVSLFSF
        G FEIL LSG F+    GG   +   +SISLA  +G +FGG +A  LIAA P QV + SF
Subjt:  GMFEILRLSGWFV----GGDPLKR--ISISLAKHDGQVFGGIVASSLIAATPTQVSLFSF

Arabidopsis top hitse value%identityAlignment
AT3G04590.1 AT hook motif DNA-binding family protein2.1e-0544.07Show/hide
Query:  GMFEILRLSGWFV---GGDPLKRISISLAKHDGQVFGGIVASSLIAATPTQVSLFSFPL
        G +EIL LSG ++    G     +S+SL+  DGQ+ GG + S L AA P QV L +F L
Subjt:  GMFEILRLSGWFV---GGDPLKRISISLAKHDGQVFGGIVASSLIAATPTQVSLFSFPL

AT3G04590.2 AT hook motif DNA-binding family protein2.1e-0544.07Show/hide
Query:  GMFEILRLSGWFV---GGDPLKRISISLAKHDGQVFGGIVASSLIAATPTQVSLFSFPL
        G +EIL LSG ++    G     +S+SL+  DGQ+ GG + S L AA P QV L +F L
Subjt:  GMFEILRLSGWFV---GGDPLKRISISLAKHDGQVFGGIVASSLIAATPTQVSLFSFPL

AT4G12080.1 AT-hook motif nuclear-localized protein 12.7e-0546.67Show/hide
Query:  GMFEILRLSGWFVGGDP------LKRISISLAKHDGQVFGGIVASSLIAATPTQVSLFSF
        G FEIL LSG F+  D          +S+SLA  DG+V GG +A  L+AA+P QV + SF
Subjt:  GMFEILRLSGWFVGGDP------LKRISISLAKHDGQVFGGIVASSLIAATPTQVSLFSF

AT4G22770.1 AT hook motif DNA-binding family protein9.3e-0648.33Show/hide
Query:  GMFEILRLSGWFVGGDP------LKRISISLAKHDGQVFGGIVASSLIAATPTQVSLFSF
        G FEIL LSG F+  D          +S+SLA  DG+V GG VA  L+AATP QV + +F
Subjt:  GMFEILRLSGWFVGGDP------LKRISISLAKHDGQVFGGIVASSLIAATPTQVSLFSF

AT5G51590.1 AT hook motif DNA-binding family protein3.5e-0548.33Show/hide
Query:  GMFEILRLSGWFV----GGDPLKR--ISISLAKHDGQVFGGIVASSLIAATPTQVSLFSF
        G FEIL L+G F+    GG   +   +S+SLA  DG+VFGG +A   IAA P QV + SF
Subjt:  GMFEILRLSGWFV----GGDPLKR--ISISLAKHDGQVFGGIVASSLIAATPTQVSLFSF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTGGTATGTTTGAGATTCTGCGTTTGTCGGGATGGTTTGTTGGAGGAGACCCATTGAAACGTATTTCTATTTCACTTGCCAAACATGACGGCCAAGTCTTT
GGTGGCATCGTCGCCTCTTCACTCATAGCTGCCACCCCCACTCAAGTATCTCTCTTTTCTTTTCCACTTTCATTTCTATATATCTTTGATTACACATTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTGTGGTATGTTTGAGATTCTGCGTTTGTCGGGATGGTTTGTTGGAGGAGACCCATTGAAACGTATTTCTATTTCACTTGCCAAACATGACGGCCAAGTCTTT
GGTGGCATCGTCGCCTCTTCACTCATAGCTGCCACCCCCACTCAAGTATCTCTCTTTTCTTTTCCACTTTCATTTCTATATATCTTTGATTACACATTGTAG
Protein sequenceShow/hide protein sequence
MCGMFEILRLSGWFVGGDPLKRISISLAKHDGQVFGGIVASSLIAATPTQVSLFSFPLSFLYIFDYTL