; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy10G172000 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy10G172000
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionZinc finger BED domain-containing protein RICESLEEPER 2-like
Genome locationchrH10:170538..185056
RNA-Seq ExpressionChy10G172000
SyntenyChy10G172000
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR003656 - Zinc finger, BED-type
IPR012337 - Ribonuclease H-like superfamily
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ACX85638.1 putative transposase [Cucumis melo]1.87e-13657.79Show/hide
Query:  MTSFSIHETSKQSCTSPVLGKRKLVKPPSSVWEHFIKVEGCDPKFPRAACKHCGASYACDSKRNSTTNLKRHLEKCKKYVDPLEDNVEGEGDSESSLMAT
        MTSFS+ ETS QSC+SPVLGKRK VKPPSSVWEHFIKVEGCDPK+PRAACKHCGASYACDSKRN TTNLKRHLEKCK YV+PLEDNVEGEGDSES+LM  
Subjt:  MTSFSIHETSKQSCTSPVLGKRKLVKPPSSVWEHFIKVEGCDPKFPRAACKHCGASYACDSKRNSTTNLKRHLEKCKKYVDPLEDNVEGEGDSESSLMAT

Query:  SFTQENCRTMLARMVILDELPFKFVGSEGFHQFCRALNPKFVIPSRVTVAKDCFQM--------------------------------------------
        SFTQENCR MLARMVILDELPFKFV SEGFHQFCRALNPKFVIPSRVTVAKDCFQM                                            
Subjt:  SFTQENCRTMLARMVILDELPFKFVGSEGFHQFCRALNPKFVIPSRVTVAKDCFQM--------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------PSPARLQIFKDFAKEDKMSTKNCLTMDVPTRWNSTFTMLDGAIKCQKTFERLEEHDPSYLPKDDIPTVEDWDNAKVFVKFLKTFSEVTMK
                 SPARLQIFKDFAKEDKMSTKNCLTMDVPTRWNSTFTMLDGAIKCQKTFERLEEHDPSYLPKDDIPT EDWDNAKVFVKFLKTFSEVTMK
Subjt:  --------PSPARLQIFKDFAKEDKMSTKNCLTMDVPTRWNSTFTMLDGAIKCQKTFERLEEHDPSYLPKDDIPTVEDWDNAKVFVKFLKTFSEVTMK

KAA0026183.1 putative transposase [Cucumis melo var. makuwa]9.66e-13557.36Show/hide
Query:  MTSFSIHETSKQSCTSPVLGKRKLVKPPSSVWEHFIKVEGCDPKFPRAACKHCGASYACDSKRNSTTNLKRHLEKCKKYVDPLEDNVEGEGDSESSLMAT
        MTSFS+ ETS QSC+SPVLGKRK VKPPSSVWEHFIKVEGCDPK+PRAACKHCGASYACDSKRN TTNLKRHLEKCK YV+PLEDNVEGEGDSES+LM  
Subjt:  MTSFSIHETSKQSCTSPVLGKRKLVKPPSSVWEHFIKVEGCDPKFPRAACKHCGASYACDSKRNSTTNLKRHLEKCKKYVDPLEDNVEGEGDSESSLMAT

Query:  SFTQENCRTMLARMVILDELPFKFVGSEGFHQFCRALNPKFVIPSRVTVAKDCFQM--------------------------------------------
        SFTQENCR MLARMVILDELPFKFV SEGFHQFCRALNPKFVIPSRVTVAKDCFQM                                            
Subjt:  SFTQENCRTMLARMVILDELPFKFVGSEGFHQFCRALNPKFVIPSRVTVAKDCFQM--------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------PSPARLQIFKDFAKEDKMSTKNCLTMDVPTRWNSTFTMLDGAIKCQKTFERLEEHDPSYLPKDDIPTVEDWDNAKVFVKFLKTFSE
                 SPARLQIFKDFAKEDKMSTKNCLTMDVPTRWNSTFTMLDGAIKCQKTFERLEEHDPSYLPKDDIPT EDWDNAKVFVKFLKTFSE
Subjt:  --------PSPARLQIFKDFAKEDKMSTKNCLTMDVPTRWNSTFTMLDGAIKCQKTFERLEEHDPSYLPKDDIPTVEDWDNAKVFVKFLKTFSE

TYK06161.1 putative transposase [Cucumis melo var. makuwa]1.45e-13557.61Show/hide
Query:  MTSFSIHETSKQSCTSPVLGKRKLVKPPSSVWEHFIKVEGCDPKFPRAACKHCGASYACDSKRNSTTNLKRHLEKCKKYVDPLEDNVEGEGDSESSLMAT
        MTSFS+ ETS QSC+SPVLGKRK VKPPSSVWEHFIKVEGCDPK+PRAACKHCG SYACDSKRN TTNLKRHLEKCK YV+PLEDNVEGEGDSESSLMA 
Subjt:  MTSFSIHETSKQSCTSPVLGKRKLVKPPSSVWEHFIKVEGCDPKFPRAACKHCGASYACDSKRNSTTNLKRHLEKCKKYVDPLEDNVEGEGDSESSLMAT

Query:  SFTQENCRTMLARMVILDELPFKFVGSEGFHQFCRALNPKFVIPSRVTVAKDCFQM--------------------------------------------
        SFTQENCR MLARMVILDELPFKFV SEGFHQFCRALNPKFVIPSRVTVAKDCFQM                                            
Subjt:  SFTQENCRTMLARMVILDELPFKFVGSEGFHQFCRALNPKFVIPSRVTVAKDCFQM--------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------PSPARLQIFKDFAKEDKMSTKNCLTMDVPTRWNSTFTMLDGAIKCQKTFERLEEHDPSYLPKDDIPTVEDWDNAKVFVKFLKTFSE
                 SPARLQIFKDFAKEDKMSTKNCLTMDVPTRWNSTFTMLDGAIKCQKTFERLEEHDPSYLPKDDIPT EDWDNAKVFVKFLKTFSE
Subjt:  --------PSPARLQIFKDFAKEDKMSTKNCLTMDVPTRWNSTFTMLDGAIKCQKTFERLEEHDPSYLPKDDIPTVEDWDNAKVFVKFLKTFSE

TYK30761.1 putative transposase [Cucumis melo var. makuwa]2.98e-13256.6Show/hide
Query:  MTSFSIHETSKQSCTSPVLGKRKLVKPPSSVWEHFIKVEGCDPKFPRAACKHCGASYACDSKRNSTTNLKRHLEKCKKYVDPLEDNVEGEGDSESSLMAT
        M SF + ETS QSC+SPVLGKRKLVKPP S WEHFIKVEGCDPK+PRAACKHC ASYACDSKRN TTNLKRHLEKCK YV+PLEDNVEGEGDSESS MA 
Subjt:  MTSFSIHETSKQSCTSPVLGKRKLVKPPSSVWEHFIKVEGCDPKFPRAACKHCGASYACDSKRNSTTNLKRHLEKCKKYVDPLEDNVEGEGDSESSLMAT

Query:  SFTQENCRTMLARMVILDELPFKFVGSEGFHQFCRALNPKFVIPSRVTVAKDCFQM--------------------------------------------
        SFTQENCR MLARMVILDELPFKFV SEGFHQFCRALNPKFVIPSRVTVAKDCFQM                                            
Subjt:  SFTQENCRTMLARMVILDELPFKFVGSEGFHQFCRALNPKFVIPSRVTVAKDCFQM--------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------PSPARLQIFKDFAKEDKMSTKNCLTMDVPTRWNSTFTMLDGAIKCQKTFERLEEHDPSYLPKDDIPTVEDWDNAKVFVKFLKTFSE
                 SPARLQIFKDFAKEDKMSTKNCLTMDVPTRWNSTFTMLDGAIKCQKTFERLEEHDPSYLPKDDIPT EDWDNAKVFVKFLKTFSE
Subjt:  --------PSPARLQIFKDFAKEDKMSTKNCLTMDVPTRWNSTFTMLDGAIKCQKTFERLEEHDPSYLPKDDIPTVEDWDNAKVFVKFLKTFSE

TYK30776.1 putative transposase [Cucumis melo var. makuwa]3.06e-13757.36Show/hide
Query:  MTSFSIHETSKQSCTSPVLGKRKLVKPPSSVWEHFIKVEGCDPKFPRAACKHCGASYACDSKRNSTTNLKRHLEKCKKYVDPLEDNVEGEGDSESSLMAT
        MTSFS+ ETS QSC+SPVLGKRK VKPPSSVWEHFIKVEGCDPK+PRAACKHCGASYACDSKRN TTNLKRHLEKCK YV+PLEDNVEGEGDSES+LM  
Subjt:  MTSFSIHETSKQSCTSPVLGKRKLVKPPSSVWEHFIKVEGCDPKFPRAACKHCGASYACDSKRNSTTNLKRHLEKCKKYVDPLEDNVEGEGDSESSLMAT

Query:  SFTQENCRTMLARMVILDELPFKFVGSEGFHQFCRALNPKFVIPSRVTVAKDCFQM--------------------------------------------
        SFTQENCR MLARMVILDELPFKFV SEGFHQFCRALNPKFVIPSRVTVAKDCFQM                                            
Subjt:  SFTQENCRTMLARMVILDELPFKFVGSEGFHQFCRALNPKFVIPSRVTVAKDCFQM--------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------PSPARLQIFKDFAKEDKMSTKNCLTMDVPTRWNSTFTMLDGAIKCQKTFERLEEHDPSYLPKDDIPTVEDWDNAKVFVKFLKTFSE
                 SPARLQIFKDFAKEDKMSTKNCLTMDVPTRWNSTFTMLDGAIKCQKTFERLEEHDPSYLPKDDIPT EDWDNAKVFVKFLKTFSE
Subjt:  --------PSPARLQIFKDFAKEDKMSTKNCLTMDVPTRWNSTFTMLDGAIKCQKTFERLEEHDPSYLPKDDIPTVEDWDNAKVFVKFLKTFSE

TrEMBL top hitse value%identityAlignment
A0A5A7SNJ1 Putative transposase1.0e-11157.36Show/hide
Query:  MTSFSIHETSKQSCTSPVLGKRKLVKPPSSVWEHFIKVEGCDPKFPRAACKHCGASYACDSKRNSTTNLKRHLEKCKKYVDPLEDNVEGEGDSESSLMAT
        MTSFS+ ETS QSC+SPVLGKRK VKPPSSVWEHFIKVEGCDPK+PRAACKHCGASYACDSKRN TTNLKRHLEKCK YV+PLEDNVEGEGDSES+LM  
Subjt:  MTSFSIHETSKQSCTSPVLGKRKLVKPPSSVWEHFIKVEGCDPKFPRAACKHCGASYACDSKRNSTTNLKRHLEKCKKYVDPLEDNVEGEGDSESSLMAT

Query:  SFTQENCRTMLARMVILDELPFKFVGSEGFHQFCRALNPKFVIPSRVTVAKDCFQM--------------------------------------------
        SFTQENCR MLARMVILDELPFKFV SEGFHQFCRALNPKFVIPSRVTVAKDCFQM                                            
Subjt:  SFTQENCRTMLARMVILDELPFKFVGSEGFHQFCRALNPKFVIPSRVTVAKDCFQM--------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------PSPARLQIFKDFAKEDKMSTKNCLTMDVPTRWNSTFTMLDGAIKCQKTFERLEEHDPSYLPKDDIPTVEDWDNAKVFVKFLKTFSE
                 SPARLQIFKDFAKEDKMSTKNCLTMDVPTRWNSTFTMLDGAIKCQKTFERLEEHDPSYLPKDDIPT EDWDNAKVFVKFLKTFSE
Subjt:  --------PSPARLQIFKDFAKEDKMSTKNCLTMDVPTRWNSTFTMLDGAIKCQKTFERLEEHDPSYLPKDDIPTVEDWDNAKVFVKFLKTFSE

A0A5D3C2L4 Putative transposase4.5e-11257.61Show/hide
Query:  MTSFSIHETSKQSCTSPVLGKRKLVKPPSSVWEHFIKVEGCDPKFPRAACKHCGASYACDSKRNSTTNLKRHLEKCKKYVDPLEDNVEGEGDSESSLMAT
        MTSFS+ ETS QSC+SPVLGKRK VKPPSSVWEHFIKVEGCDPK+PRAACKHCG SYACDSKRN TTNLKRHLEKCK YV+PLEDNVEGEGDSESSLMA 
Subjt:  MTSFSIHETSKQSCTSPVLGKRKLVKPPSSVWEHFIKVEGCDPKFPRAACKHCGASYACDSKRNSTTNLKRHLEKCKKYVDPLEDNVEGEGDSESSLMAT

Query:  SFTQENCRTMLARMVILDELPFKFVGSEGFHQFCRALNPKFVIPSRVTVAKDCFQM--------------------------------------------
        SFTQENCR MLARMVILDELPFKFV SEGFHQFCRALNPKFVIPSRVTVAKDCFQM                                            
Subjt:  SFTQENCRTMLARMVILDELPFKFVGSEGFHQFCRALNPKFVIPSRVTVAKDCFQM--------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------PSPARLQIFKDFAKEDKMSTKNCLTMDVPTRWNSTFTMLDGAIKCQKTFERLEEHDPSYLPKDDIPTVEDWDNAKVFVKFLKTFSE
                 SPARLQIFKDFAKEDKMSTKNCLTMDVPTRWNSTFTMLDGAIKCQKTFERLEEHDPSYLPKDDIPT EDWDNAKVFVKFLKTFSE
Subjt:  --------PSPARLQIFKDFAKEDKMSTKNCLTMDVPTRWNSTFTMLDGAIKCQKTFERLEEHDPSYLPKDDIPTVEDWDNAKVFVKFLKTFSE

A0A5D3E4G3 Putative transposase1.0e-11157.36Show/hide
Query:  MTSFSIHETSKQSCTSPVLGKRKLVKPPSSVWEHFIKVEGCDPKFPRAACKHCGASYACDSKRNSTTNLKRHLEKCKKYVDPLEDNVEGEGDSESSLMAT
        MTSFS+ ETS QSC+SPVLGKRK VKPPSSVWEHFIKVEGCDPK+PRAACKHCGASYACDSKRN TTNLKRHLEKCK YV+PLEDNVEGEGDSES+LM  
Subjt:  MTSFSIHETSKQSCTSPVLGKRKLVKPPSSVWEHFIKVEGCDPKFPRAACKHCGASYACDSKRNSTTNLKRHLEKCKKYVDPLEDNVEGEGDSESSLMAT

Query:  SFTQENCRTMLARMVILDELPFKFVGSEGFHQFCRALNPKFVIPSRVTVAKDCFQM--------------------------------------------
        SFTQENCR MLARMVILDELPFKFV SEGFHQFCRALNPKFVIPSRVTVAKDCFQM                                            
Subjt:  SFTQENCRTMLARMVILDELPFKFVGSEGFHQFCRALNPKFVIPSRVTVAKDCFQM--------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------PSPARLQIFKDFAKEDKMSTKNCLTMDVPTRWNSTFTMLDGAIKCQKTFERLEEHDPSYLPKDDIPTVEDWDNAKVFVKFLKTFSE
                 SPARLQIFKDFAKEDKMSTKNCLTMDVPTRWNSTFTMLDGAIKCQKTFERLEEHDPSYLPKDDIPT EDWDNAKVFVKFLKTFSE
Subjt:  --------PSPARLQIFKDFAKEDKMSTKNCLTMDVPTRWNSTFTMLDGAIKCQKTFERLEEHDPSYLPKDDIPTVEDWDNAKVFVKFLKTFSE

A0A5D3E590 Putative transposase1.6e-10956.6Show/hide
Query:  MTSFSIHETSKQSCTSPVLGKRKLVKPPSSVWEHFIKVEGCDPKFPRAACKHCGASYACDSKRNSTTNLKRHLEKCKKYVDPLEDNVEGEGDSESSLMAT
        M SF + ETS QSC+SPVLGKRKLVKPP S WEHFIKVEGCDPK+PRAACKHC ASYACDSKRN TTNLKRHLEKCK YV+PLEDNVEGEGDSESS MA 
Subjt:  MTSFSIHETSKQSCTSPVLGKRKLVKPPSSVWEHFIKVEGCDPKFPRAACKHCGASYACDSKRNSTTNLKRHLEKCKKYVDPLEDNVEGEGDSESSLMAT

Query:  SFTQENCRTMLARMVILDELPFKFVGSEGFHQFCRALNPKFVIPSRVTVAKDCFQM--------------------------------------------
        SFTQENCR MLARMVILDELPFKFV SEGFHQFCRALNPKFVIPSRVTVAKDCFQM                                            
Subjt:  SFTQENCRTMLARMVILDELPFKFVGSEGFHQFCRALNPKFVIPSRVTVAKDCFQM--------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------PSPARLQIFKDFAKEDKMSTKNCLTMDVPTRWNSTFTMLDGAIKCQKTFERLEEHDPSYLPKDDIPTVEDWDNAKVFVKFLKTFSE
                 SPARLQIFKDFAKEDKMSTKNCLTMDVPTRWNSTFTMLDGAIKCQKTFERLEEHDPSYLPKDDIPT EDWDNAKVFVKFLKTFSE
Subjt:  --------PSPARLQIFKDFAKEDKMSTKNCLTMDVPTRWNSTFTMLDGAIKCQKTFERLEEHDPSYLPKDDIPTVEDWDNAKVFVKFLKTFSE

D0UIX2 Putative transposase6.3e-11457.79Show/hide
Query:  MTSFSIHETSKQSCTSPVLGKRKLVKPPSSVWEHFIKVEGCDPKFPRAACKHCGASYACDSKRNSTTNLKRHLEKCKKYVDPLEDNVEGEGDSESSLMAT
        MTSFS+ ETS QSC+SPVLGKRK VKPPSSVWEHFIKVEGCDPK+PRAACKHCGASYACDSKRN TTNLKRHLEKCK YV+PLEDNVEGEGDSES+LM  
Subjt:  MTSFSIHETSKQSCTSPVLGKRKLVKPPSSVWEHFIKVEGCDPKFPRAACKHCGASYACDSKRNSTTNLKRHLEKCKKYVDPLEDNVEGEGDSESSLMAT

Query:  SFTQENCRTMLARMVILDELPFKFVGSEGFHQFCRALNPKFVIPSRVTVAKDCFQM--------------------------------------------
        SFTQENCR MLARMVILDELPFKFV SEGFHQFCRALNPKFVIPSRVTVAKDCFQM                                            
Subjt:  SFTQENCRTMLARMVILDELPFKFVGSEGFHQFCRALNPKFVIPSRVTVAKDCFQM--------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------PSPARLQIFKDFAKEDKMSTKNCLTMDVPTRWNSTFTMLDGAIKCQKTFERLEEHDPSYLPKDDIPTVEDWDNAKVFVKFLKTFSEVTMK
                 SPARLQIFKDFAKEDKMSTKNCLTMDVPTRWNSTFTMLDGAIKCQKTFERLEEHDPSYLPKDDIPT EDWDNAKVFVKFLKTFSEVTMK
Subjt:  --------PSPARLQIFKDFAKEDKMSTKNCLTMDVPTRWNSTFTMLDGAIKCQKTFERLEEHDPSYLPKDDIPTVEDWDNAKVFVKFLKTFSEVTMK

SwissProt top hitse value%identityAlignment
B9FJG3 Zinc finger BED domain-containing protein RICESLEEPER 13.6e-0530.59Show/hide
Query:  FQMPSPARLQIFKDFAKEDKMSTKNCLTMDVPTRWNSTFTMLDGAIKCQKTFERLEEHDPSYLPKDDIPTVEDWDNAKVFVKFLK
        F   SP+  + F + A + ++ +   L +DV T+WN+T+ ML  A+  ++ F  LE  D +Y   ++ P+ EDW   +    +LK
Subjt:  FQMPSPARLQIFKDFAKEDKMSTKNCLTMDVPTRWNSTFTMLDGAIKCQKTFERLEEHDPSYLPKDDIPTVEDWDNAKVFVKFLK

Q0JMB2 Zinc finger BED domain-containing protein RICESLEEPER 47.9e-0532.1Show/hide
Query:  FKDFAKEDKMSTKNCLTMDVPTRWNSTFTMLDGAIKCQKTFERLEEHDPSYLPKDDIPTVEDWDNAKVFVKFLKTFSEVTM
        F + A E K+++ N L +DV + WN+T+ ML  A+  ++ F  LE +  +Y      P+ EDW   +    FLK     T+
Subjt:  FKDFAKEDKMSTKNCLTMDVPTRWNSTFTMLDGAIKCQKTFERLEEHDPSYLPKDDIPTVEDWDNAKVFVKFLKTFSEVTM

Q6AVI0 Zinc finger BED domain-containing protein RICESLEEPER 24.2e-0631.76Show/hide
Query:  FQMPSPARLQIFKDFAKEDKMSTKNCLTMDVPTRWNSTFTMLDGAIKCQKTFERLEEHDPSYLPKDDIPTVEDWDNAKVFVKFLK
        F   SP+R + F + A + ++ +   L +DV T+WN+T+ ML  A+  ++ F  LE  D +Y   ++ P+ EDW   +    +LK
Subjt:  FQMPSPARLQIFKDFAKEDKMSTKNCLTMDVPTRWNSTFTMLDGAIKCQKTFERLEEHDPSYLPKDDIPTVEDWDNAKVFVKFLK

Q75HY5 Zinc finger BED domain-containing protein RICESLEEPER 34.5e-0830.57Show/hide
Query:  HETSKQSCTSPVLGKRKLVKPPSSVWEHFIKVEGCDPKFPRAACKHCGA--SYACDSKRNSTTNLKRHLEKCKKYVDPLED-----------NVEGEGDS
        HE      T+P   +R+  K  S VWEHF  +E       RA+C  C    +Y+C SK + T++LKRH+      +   ED           N +GEG +
Subjt:  HETSKQSCTSPVLGKRKLVKPPSSVWEHFIKVEGCDPKFPRAACKHCGA--SYACDSKRNSTTNLKRHLEKCKKYVDPLED-----------NVEGEGDS

Query:  E---------SSLMATSFTQENCRTMLARMVILDELPFKFVGSEGFHQFCRALNPKF
        E         +      F Q+   + LA+M+IL + P   V   GF  F  +L P+F
Subjt:  E---------SSLMATSFTQENCRTMLARMVILDELPFKFVGSEGFHQFCRALNPKF

Q9M2N5 Zinc finger BED domain-containing protein DAYSLEEPER2.8e-1028.14Show/hide
Query:  SPVLGKRKLVKPPSSVWEHFIKVEGCDPKFPRAACKHCGASYACD--SKRNSTTNLKRHLEK--CKKYV---------------DPLEDNVEGEGDSESS
        SP     K  K  S VWEHF  +E  +P   RA CK C  S+A    +K   T++LKRH+ K  C   +                P  D       S+++
Subjt:  SPVLGKRKLVKPPSSVWEHFIKVEGCDPKFPRAACKHCGASYACD--SKRNSTTNLKRHLEK--CKKYV---------------DPLEDNVEGEGDSESS

Query:  LMA-TSFTQENCRTMLARMVILDELPFKFVGSEGFHQFCRALNPKFVIPSRVTVAKDCFQMPSPARLQIFKDFAKEDKMSTKNCLTMDVPTRWNSTFTM
             +F Q+ CR  +A+M+I+ + P   V   GF  F +++ P F   S   V  DC       +  + K     + +  + CLT+D    W S  T+
Subjt:  LMA-TSFTQENCRTMLARMVILDELPFKFVGSEGFHQFCRALNPKFVIPSRVTVAKDCFQMPSPARLQIFKDFAKEDKMSTKNCLTMDVPTRWNSTFTM

Arabidopsis top hitse value%identityAlignment
AT3G42170.1 BED zinc finger ;hAT family dimerisation domain2.0e-1128.14Show/hide
Query:  SPVLGKRKLVKPPSSVWEHFIKVEGCDPKFPRAACKHCGASYACD--SKRNSTTNLKRHLEK--CKKYV---------------DPLEDNVEGEGDSESS
        SP     K  K  S VWEHF  +E  +P   RA CK C  S+A    +K   T++LKRH+ K  C   +                P  D       S+++
Subjt:  SPVLGKRKLVKPPSSVWEHFIKVEGCDPKFPRAACKHCGASYACD--SKRNSTTNLKRHLEK--CKKYV---------------DPLEDNVEGEGDSESS

Query:  LMA-TSFTQENCRTMLARMVILDELPFKFVGSEGFHQFCRALNPKFVIPSRVTVAKDCFQMPSPARLQIFKDFAKEDKMSTKNCLTMDVPTRWNSTFTM
             +F Q+ CR  +A+M+I+ + P   V   GF  F +++ P F   S   V  DC       +  + K     + +  + CLT+D    W S  T+
Subjt:  LMA-TSFTQENCRTMLARMVILDELPFKFVGSEGFHQFCRALNPKFVIPSRVTVAKDCFQMPSPARLQIFKDFAKEDKMSTKNCLTMDVPTRWNSTFTM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTTCATTCTCTATACACGAAACTTCAAAACAAAGTTGTACTAGTCCAGTGTTAGGAAAAAGAAAACTGGTTAAACCACCATCATCGGTATGGGAACATTTTATAAA
AGTAGAAGGATGTGATCCTAAATTTCCTAGGGCTGCTTGTAAACACTGTGGGGCTTCATATGCTTGTGATTCCAAAAGAAACAGTACAACTAATTTAAAAAGACATTTAG
AGAAATGTAAAAAGTATGTAGATCCATTGGAAGATAATGTTGAAGGAGAGGGAGATTCTGAAAGTAGTTTAATGGCTACATCCTTCACTCAAGAAAATTGTAGAACAATG
CTTGCTAGGATGGTTATCTTGGATGAATTGCCATTTAAATTTGTAGGAAGTGAAGGATTTCATCAATTTTGTAGGGCATTAAATCCAAAGTTTGTGATTCCATCAAGAGT
AACTGTTGCAAAGGATTGTTTTCAGATGCCATCTCCTGCTAGACTGCAAATATTTAAAGATTTTGCCAAAGAAGATAAAATGTCAACAAAAAATTGTCTTACGATGGATG
TTCCAACACGATGGAATTCTACTTTTACTATGTTGGATGGAGCAATTAAGTGTCAAAAGACGTTTGAAAGATTAGAGGAGCACGACCCTAGTTATTTGCCAAAGGATGAT
ATTCCTACTGTTGAAGATTGGGATAATGCAAAAGTGTTTGTAAAGTTCCTAAAAACTTTTTCAGAGGTAACAATGAAATGACGAATAAGGTTGAAGAAGCATTTCGTCGA
TTGTGTGATGATTATTATATGAGAATGTCAATATCAAAAGAAAAATATTCACAAACACAATCTTGTACTCCTATCGAAGAATTTATGTTTCAAAGTCAAAGTGAAATGCC
TTCTATCTCATCTAGTGGATCTTATAAGGCACGTGCTGCTGTTCATGATAGATTTAAACAAAGCAACAAAACATGTCTTGATGATGCTAAAACAGAGGTGACTCGTTTTC
TAGATGAGACTCATATAGAAGATGAATATTTAGACTTGCTAAATTGGTGGAAGGTGAATTCTTCTCGATTTAAGATCATTAGCCAAGTAGCCAGGGACATCTATAGTATT
CCTATATTAACTGTGACTTCTGAGTCAGCCTTTAGCACTGGAGGACGGGTGTTAGATTATTTTCGAAGTTCATTAACTCCTCAAACTGCAGAAGCACTCATTTGTGCTCA
GAATTGGATTCAATCTAAACCTTTGGATGACATGACTGAAGAAATTGATGGGGCTGAAGAAATTGATGAAGAATTCATAAACATAGGAAAGGAGATGGAAGCTCCATTTG
AGAATCTGAATCATGACTCTATGAATATAGGTCATATCTCAACTTATTG
mRNA sequenceShow/hide mRNA sequence
ATGACTTCATTCTCTATACACGAAACTTCAAAACAAAGTTGTACTAGTCCAGTGTTAGGAAAAAGAAAACTGGTTAAACCACCATCATCGGTATGGGAACATTTTATAAA
AGTAGAAGGATGTGATCCTAAATTTCCTAGGGCTGCTTGTAAACACTGTGGGGCTTCATATGCTTGTGATTCCAAAAGAAACAGTACAACTAATTTAAAAAGACATTTAG
AGAAATGTAAAAAGTATGTAGATCCATTGGAAGATAATGTTGAAGGAGAGGGAGATTCTGAAAGTAGTTTAATGGCTACATCCTTCACTCAAGAAAATTGTAGAACAATG
CTTGCTAGGATGGTTATCTTGGATGAATTGCCATTTAAATTTGTAGGAAGTGAAGGATTTCATCAATTTTGTAGGGCATTAAATCCAAAGTTTGTGATTCCATCAAGAGT
AACTGTTGCAAAGGATTGTTTTCAGATGCCATCTCCTGCTAGACTGCAAATATTTAAAGATTTTGCCAAAGAAGATAAAATGTCAACAAAAAATTGTCTTACGATGGATG
TTCCAACACGATGGAATTCTACTTTTACTATGTTGGATGGAGCAATTAAGTGTCAAAAGACGTTTGAAAGATTAGAGGAGCACGACCCTAGTTATTTGCCAAAGGATGAT
ATTCCTACTGTTGAAGATTGGGATAATGCAAAAGTGTTTGTAAAGTTCCTAAAAACTTTTTCAGAGGTAACAATGAAATGACGAATAAGGTTGAAGAAGCATTTCGTCGA
TTGTGTGATGATTATTATATGAGAATGTCAATATCAAAAGAAAAATATTCACAAACACAATCTTGTACTCCTATCGAAGAATTTATGTTTCAAAGTCAAAGTGAAATGCC
TTCTATCTCATCTAGTGGATCTTATAAGGCACGTGCTGCTGTTCATGATAGATTTAAACAAAGCAACAAAACATGTCTTGATGATGCTAAAACAGAGGTGACTCGTTTTC
TAGATGAGACTCATATAGAAGATGAATATTTAGACTTGCTAAATTGGTGGAAGGTGAATTCTTCTCGATTTAAGATCATTAGCCAAGTAGCCAGGGACATCTATAGTATT
CCTATATTAACTGTGACTTCTGAGTCAGCCTTTAGCACTGGAGGACGGGTGTTAGATTATTTTCGAAGTTCATTAACTCCTCAAACTGCAGAAGCACTCATTTGTGCTCA
GAATTGGATTCAATCTAAACCTTTGGATGACATGACTGAAGAAATTGATGGGGCTGAAGAAATTGATGAAGAATTCATAAACATAGGAAAGGAGATGGAAGCTCCATTTG
AGAATCTGAATCATGACTCTATGAATATAGGTCATATCTCAACTTATTG
Protein sequenceShow/hide protein sequence
MTSFSIHETSKQSCTSPVLGKRKLVKPPSSVWEHFIKVEGCDPKFPRAACKHCGASYACDSKRNSTTNLKRHLEKCKKYVDPLEDNVEGEGDSESSLMATSFTQENCRTM
LARMVILDELPFKFVGSEGFHQFCRALNPKFVIPSRVTVAKDCFQMPSPARLQIFKDFAKEDKMSTKNCLTMDVPTRWNSTFTMLDGAIKCQKTFERLEEHDPSYLPKDD
IPTVEDWDNAKVFVKFLKTFSEVTMKRIRLKKHFVDCVMIII*ECQYQKKNIHKHNLVLLSKNLCFKVKVKCLLSHLVDLIRHVLLFMIDLNKATKHVLMMLKQRLVF*M
RLI*KMNI*TC*IGGR*ILLDLRSLAK*PGTSIVFLYL*LLSQPLALEDGC*IIFEVH*LLKLQKHSFVLRIGFNLNLWMT*LKKLMGLKKLMKNST*ERRWKLHLRI*I
MTL*I*VISQLIX