; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy11G190200 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy11G190200
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
Genome locationchrH11:4315177..4316266
RNA-Seq ExpressionChy11G190200
SyntenyChy11G190200
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5817320.1 putative intermediate filament protein [Helianthus annuus]3.92e-0740.29Show/hide
Query:  WTLWGWLW*GW*RW*WRWRWWQ*RR*WWYWLERWCTWSSWWCW*HYRWWW*HYRWWWCSRSS*WWWRR**HWRRWWWCSRTS*SWWWW*RRGLGGGGGNS
        W  W W W  W  W W W WW     WW+W   W  W  WW W  + WWW  + WWW      WWW     W  WWW       WWWW   G GGGGG  
Subjt:  WTLWGWLW*GW*RW*WRWRWWQ*RR*WWYWLERWCTWSSWWCW*HYRWWW*HYRWWWCSRSS*WWWRR**HWRRWWWCSRTS*SWWWW*RRGLGGGGGNS

Query:  GHRCDGGVRKRRDGGGGNRRDGGIRGYRDGGSHRNGGDG
        G    GG      GGGG    GG  G   GG    GG G
Subjt:  GHRCDGGVRKRRDGGGGNRRDGGIRGYRDGGSHRNGGDG
TrEMBL top hitse value%identityAlignment
A0A0A0LKZ5 Uncharacterized protein1.6e-1284.62Show/hide
Query:  RGLGGGGGNSGHRCDGGVRKRRDGGGGNRRDGGIRGYRDGGSHRNGGDGDRL
        RG GGGGGN GHRCDGGVR+RRDGGGGNRRDGG+RGYRDGGS RNGG  D L
Subjt:  RGLGGGGGNSGHRCDGGVRKRRDGGGGNRRDGGIRGYRDGGSHRNGGDGDRL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCAACCCAAGAGTATTGGTGTGAGGGTGAACTTCATGGATCCAAGTTTGCAATGGAAGCCATTGCCTTCTCCACAAGCAAAATAGTAAGGATTTTGGTCTTTAAG
CACAAACTCAAACCCATCTCCACTTCCCTGTGTTACATTTGCTAACATTTTGGCCTTTCCAAAATTACAATTGGCAAGGCTTCTCATGTTTGGTAGCAGATAAAC
ATTATGAGGTGGAGTTGAACTATTTGGACGATCATATTTGAACACAAGGATATCATTGACATAAAAGGGACCATTTTTGAGTGCCCAATCAGTGTAGTCGAAGCC
AAGCTGCCATTGATTCGAACCGCCCACAATGATCTTTCTTGGACTTTGTGGGGTTGGTTGTGGTGAGGGTGGTAACGATGGTGATGGAGATGGCGGTGGTGGCAA
TGACGGCGGTGATGGTGGTATTGGTTGGAACGGTGGTGTACGTGGTCGTCGTGGTGGTGTTGGTGACACTATCGGTGGTGGTGGTGACACTATCGGTGGTGGTGG
TGTTCGAGGTCTTCGTGATGGTGGTGGAGGCGATGATAGCATTGGCGGCGTTGGTGGTGGTGTTCGAGGACGTCGTGATCGTGGTGGTGGTGGTGACGTCGTGGT
CTTGGTGGTGGTGGCGGCAACAGTGGACATCGTTGTGATGGTGGAGTTCGAAAACGTCGTGATGGTGGGGGTGGAAACCGTCGTGATGGCGGAATTCGTGGGTAT
CGTGATGGTGGTAGCCACCGTAATGGTGGTGACGGAGATCGCTTATGACAAGGTATGGAAGGCACGGTGCAATTTGGTCGTCCCCAAAACCAACGTCCATTATTG
GCAGAGCATAGAGTTGAGATGCATGCCCAAATGAAAAGAATGATAAGTTTTGAACTGATGAAAGCCAT
mRNA sequenceShow/hide mRNA sequence
TCAACCCAAGAGTATTGGTGTGAGGGTGAACTTCATGGATCCAAGTTTGCAATGGAAGCCATTGCCTTCTCCACAAGCAAAATAGTAAGGATTTTGGTCTTTAAG
CACAAACTCAAACCCATCTCCACTTCCCTGTGTTACATTTGCTAACATTTTGGCCTTTCCAAAATTACAATTGGCAAGGCTTCTCATGTTTGGTAGCAGATAAAC
ATTATGAGGTGGAGTTGAACTATTTGGACGATCATATTTGAACACAAGGATATCATTGACATAAAAGGGACCATTTTTGAGTGCCCAATCAGTGTAGTCGAAGCC
AAGCTGCCATTGATTCGAACCGCCCACAATGATCTTTCTTGGACTTTGTGGGGTTGGTTGTGGTGAGGGTGGTAACGATGGTGATGGAGATGGCGGTGGTGGCAA
TGACGGCGGTGATGGTGGTATTGGTTGGAACGGTGGTGTACGTGGTCGTCGTGGTGGTGTTGGTGACACTATCGGTGGTGGTGGTGACACTATCGGTGGTGGTGG
TGTTCGAGGTCTTCGTGATGGTGGTGGAGGCGATGATAGCATTGGCGGCGTTGGTGGTGGTGTTCGAGGACGTCGTGATCGTGGTGGTGGTGGTGACGTCGTGGT
CTTGGTGGTGGTGGCGGCAACAGTGGACATCGTTGTGATGGTGGAGTTCGAAAACGTCGTGATGGTGGGGGTGGAAACCGTCGTGATGGCGGAATTCGTGGGTAT
CGTGATGGTGGTAGCCACCGTAATGGTGGTGACGGAGATCGCTTATGACAAGGTATGGAAGGCACGGTGCAATTTGGTCGTCCCCAAAACCAACGTCCATTATTG
GCAGAGCATAGAGTTGAGATGCATGCCCAAATGAAAAGAATGATAAGTTTTGAACTGATGAAAGCCAT
Protein sequenceShow/hide protein sequence
STQEYWCEGELHGSKFAMEAIAFSTSKIVRILVFKHKLKPISTSLCYICHFGLSKITIGKASHVWQINIMRWS*TIWTIIFEHKDIIDIKGTIFECPISVVEAKL
PLIRTAHNDLSWTLWGWLWGW*RW*WRWRWWQ*RR*WWYWLERWCTWSSWWCW*HYRWWW*HYRWWWCSRSSWWWRR**HWRRWWWCSRTS*SWWWW*RRGLGGG
GGNSGHRCDGGVRKRRDGGGGNRRDGGIRGYRDGGSHRNGGDGDRLQGMEGTVQFGRPQNQRPLLAEHRVEMHAQMKRMISFELMKAX