; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy11G190410 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy11G190410
OrganismCucumis hystrix (Cucumber (hystrix) v1)
Descriptiontransducin beta-like protein 3
Genome locationchrH11:4836170..4841693
RNA-Seq ExpressionChy11G190410
SyntenyChy11G190410
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063747.1 transducin beta-like protein 3 [Cucumis melo var. makuwa]1.70e-3234.77Show/hide
Query:  LAEDANKPINLKAKAIVAAQDKDINSIAVAPNNSLVCSGSQ-----------------------------------------------------------
        LAEDANKP+NLKAKAIVAA DKDINSIAVAPN+SLVCSGSQ                                                           
Subjt:  LAEDANKPINLKAKAIVAAQDKDINSIAVAPNNSLVCSGSQ-----------------------------------------------------------

Query:  -----------------------------------------------------------------------------------------EEGVLKGP---
                                                                                                 EEGVLKG    
Subjt:  -----------------------------------------------------------------------------------------EEGVLKGP---

Query:  GTVSDADYTKAIQIAFELRRSHRLYIC--SVHSKNNSENHVGKSLDALGKEEFRTYCLNILENGIRSLN----------------FATLQNLCFSELSA-
          VSDADYTKAIQIAFELRR HRLY+    + SKN+SENHVGKSL ALGKEEFR     +L   +R  N                F+ L     SE+   
Subjt:  GTVSDADYTKAIQIAFELRRSHRLYIC--SVHSKNNSENHVGKSLDALGKEEFRTYCLNILENGIRSLN----------------FATLQNLCFSELSA-

Query:  -----------------------SSFLRQRSLRTI----PQ--------FDIDMKTRTTDIKLSNEYSEPEGKALSKKRKSRSKTSSKKEGKAL
                               SSFL   +L  +    P+        FDIDMKT+TTDIKL NE+SEPE KALSKKRKSRSKTSSKK+ K +
Subjt:  -----------------------SSFLRQRSLRTI----PQ--------FDIDMKTRTTDIKLSNEYSEPEGKALSKKRKSRSKTSSKKEGKAL

XP_004135541.1 transducin beta-like protein 3 [Cucumis sativus]2.69e-2732.49Show/hide
Query:  LAEDANKPINLKAKAIVAAQDKDINSIAVAPNNSLVCSGSQ-----------------------------------------------------------
        LAED ++P+NLKAKAIVAA DKDINSIAVAPN+SLVCSGSQ                                                           
Subjt:  LAEDANKPINLKAKAIVAAQDKDINSIAVAPNNSLVCSGSQ-----------------------------------------------------------

Query:  -----------------------------------------------------------------------------------------EEGVLKGP---
                                                                                                 EEGVLKG    
Subjt:  -----------------------------------------------------------------------------------------EEGVLKGP---

Query:  GTVSDADYTKAIQIAFELRRSHRLYIC--SVHSKNNSENHVGKSLDALGKEEFRTYCLNILENGIRSLN----------------FATLQNLCFSELSA-
          VSDADYTKAIQIAFELRR HRLY+    + SKN+SENHVGKSL ALGKEEFR     +L   +R  N                F+ L     SE+   
Subjt:  GTVSDADYTKAIQIAFELRRSHRLYIC--SVHSKNNSENHVGKSLDALGKEEFRTYCLNILENGIRSLN----------------FATLQNLCFSELSA-

Query:  -----------------------SSFLRQRSLRTI------------PQFDIDMKTRTTDIKLSNEYSEPEGKALSKKRKSRSKTSSKKEGKAL
                               SSFL   +L  +            P  DI MKT+TTDIKL +E+ EPE   LSKKRKSRSKTSSKK+ K +
Subjt:  -----------------------SSFLRQRSLRTI------------PQFDIDMKTRTTDIKLSNEYSEPEGKALSKKRKSRSKTSSKKEGKAL

XP_008445600.1 PREDICTED: transducin beta-like protein 3 [Cucumis melo]1.63e-3234.77Show/hide
Query:  LAEDANKPINLKAKAIVAAQDKDINSIAVAPNNSLVCSGSQ-----------------------------------------------------------
        LAEDANKP+NLKAKAIVAA DKDINSIAVAPN+SLVCSGSQ                                                           
Subjt:  LAEDANKPINLKAKAIVAAQDKDINSIAVAPNNSLVCSGSQ-----------------------------------------------------------

Query:  -----------------------------------------------------------------------------------------EEGVLKGP---
                                                                                                 EEGVLKG    
Subjt:  -----------------------------------------------------------------------------------------EEGVLKGP---

Query:  GTVSDADYTKAIQIAFELRRSHRLYIC--SVHSKNNSENHVGKSLDALGKEEFRTYCLNILENGIRSLN----------------FATLQNLCFSELSA-
          VSDADYTKAIQIAFELRR HRLY+    + SKN+SENHVGKSL ALGKEEFR     +L   +R  N                F+ L     SE+   
Subjt:  GTVSDADYTKAIQIAFELRRSHRLYIC--SVHSKNNSENHVGKSLDALGKEEFRTYCLNILENGIRSLN----------------FATLQNLCFSELSA-

Query:  -----------------------SSFLRQRSLRTI----PQ--------FDIDMKTRTTDIKLSNEYSEPEGKALSKKRKSRSKTSSKKEGKAL
                               SSFL   +L  +    P+        FDIDMKT+TTDIKL NE+SEPE KALSKKRKSRSKTSSKK+ K +
Subjt:  -----------------------SSFLRQRSLRTI----PQ--------FDIDMKTRTTDIKLSNEYSEPEGKALSKKRKSRSKTSSKKEGKAL

XP_014626953.1 uncharacterized protein LOC102665314 [Glycine max]7.19e-3364.15Show/hide
Query:  LAEDANKPINLKAKAIVAAQDKDINSIAVAPNNSLVCSGSQEEGVLKGP---GTVSDADYTKAIQIAFELRRSHRLY--ICSVHSKNNSENHVGKSLDAL
        L+++   PINLKAKA+VAA DKDINS+AVAPN+SLVCSGSQEEGV+KG      VSDADYTKAIQIAFELRR HRL+     +  K  +ENH+ ++L  L
Subjt:  LAEDANKPINLKAKAIVAAQDKDINSIAVAPNNSLVCSGSQEEGVLKGP---GTVSDADYTKAIQIAFELRRSHRLY--ICSVHSKNNSENHVGKSLDAL

Query:  GKEEFR
        G EE R
Subjt:  GKEEFR

XP_028192523.1 uncharacterized protein LOC114378175 [Glycine soja]6.48e-3162.5Show/hide
Query:  LAEDANKPINLKAKAIVAAQDKDINSIAVAPNNSLVCSGSQEEGVLKGP---GTVSDADYTKAIQIAFELRRSHRLY--ICSVHSKNNSENHVGKSLDAL
        L+++   PINLKAK +VAA DKDINS+ VAPN+SLVCSGSQEEGV+KG      VSDADYTKAIQIAFELRR HRL+     +  K  +ENH+ ++L  L
Subjt:  LAEDANKPINLKAKAIVAAQDKDINSIAVAPNNSLVCSGSQEEGVLKGP---GTVSDADYTKAIQIAFELRRSHRLY--ICSVHSKNNSENHVGKSLDAL

Query:  GKEE
        G EE
Subjt:  GKEE

TrEMBL top hitse value%identityAlignment
A0A0A0LVT4 WD_REPEATS_REGION domain-containing protein3.3e-2332.24Show/hide
Query:  LAEDANKPINLKAKAIVAAQDKDINSIAVAPNNSLVCSGSQ-----------------------------------------------------------
        LAED ++P+NLKAKAIVAA DKDINSIAVAPN+SLVCSGSQ                                                           
Subjt:  LAEDANKPINLKAKAIVAAQDKDINSIAVAPNNSLVCSGSQ-----------------------------------------------------------

Query:  -----------------------------------------------------------------------------------------EEGVLKG---P
                                                                                                 EEGVLKG    
Subjt:  -----------------------------------------------------------------------------------------EEGVLKG---P

Query:  GTVSDADYTKAIQIAFELRRSHRLYI--CSVHSKNNSENHVGKSLDALGKEEFRTYCLNILENGIRSLNFATLQNLC-----------------------
          VSDADYTKAIQIAFELRR HRLY+    + SKN+SENHVGKSL ALGKEEFR     +L   +R  N  T   LC                       
Subjt:  GTVSDADYTKAIQIAFELRRSHRLYI--CSVHSKNNSENHVGKSLDALGKEEFRTYCLNILENGIRSLNFATLQNLC-----------------------

Query:  -------------------FSELSASSFLRQRSLRTI------------PQFDIDMKTRTTDIKLSNEYSEPEGKALSKKRKSRSKTSSKKEGKALS
                              L  SSFL   +L  +            P  DI MKT+TTDIKL +E+ EPE   LSKKRKSRSKTSSKK+ K ++
Subjt:  -------------------FSELSASSFLRQRSLRTI------------PQFDIDMKTRTTDIKLSNEYSEPEGKALSKKRKSRSKTSSKKEGKALS

A0A1S3BCL9 transducin beta-like protein 31.0e-2734.1Show/hide
Query:  LAEDANKPINLKAKAIVAAQDKDINSIAVAPNNSLVCSGSQ-----------------------------------------------------------
        LAEDANKP+NLKAKAIVAA DKDINSIAVAPN+SLVCSGSQ                                                           
Subjt:  LAEDANKPINLKAKAIVAAQDKDINSIAVAPNNSLVCSGSQ-----------------------------------------------------------

Query:  -----------------------------------------------------------------------------------------EEGVLKG---P
                                                                                                 EEGVLKG    
Subjt:  -----------------------------------------------------------------------------------------EEGVLKG---P

Query:  GTVSDADYTKAIQIAFELRRSHRLYI--CSVHSKNNSENHVGKSLDALGKEEFRTYCLNILENGIRSLNFATLQNLCFSELS------------------
          VSDADYTKAIQIAFELRR HRLY+    + SKN+SENHVGKSL ALGKEEFR     + E   +       Q + F   S                  
Subjt:  GTVSDADYTKAIQIAFELRRSHRLYI--CSVHSKNNSENHVGKSLDALGKEEFRTYCLNILENGIRSLNFATLQNLCFSELS------------------

Query:  -----------------ASSFLRQRSLRTI------------PQFDIDMKTRTTDIKLSNEYSEPEGKALSKKRKSRSKTSSKKEGKALS
                          SSFL   +L  +              FDIDMKT+TTDIKL NE+SEPE KALSKKRKSRSKTSSKK+ K ++
Subjt:  -----------------ASSFLRQRSLRTI------------PQFDIDMKTRTTDIKLSNEYSEPEGKALSKKRKSRSKTSSKKEGKALS

A0A5A7V9T7 Transducin beta-like protein 31.0e-2734.1Show/hide
Query:  LAEDANKPINLKAKAIVAAQDKDINSIAVAPNNSLVCSGSQ-----------------------------------------------------------
        LAEDANKP+NLKAKAIVAA DKDINSIAVAPN+SLVCSGSQ                                                           
Subjt:  LAEDANKPINLKAKAIVAAQDKDINSIAVAPNNSLVCSGSQ-----------------------------------------------------------

Query:  -----------------------------------------------------------------------------------------EEGVLKG---P
                                                                                                 EEGVLKG    
Subjt:  -----------------------------------------------------------------------------------------EEGVLKG---P

Query:  GTVSDADYTKAIQIAFELRRSHRLYI--CSVHSKNNSENHVGKSLDALGKEEFRTYCLNILENGIRSLNFATLQNLCFSELS------------------
          VSDADYTKAIQIAFELRR HRLY+    + SKN+SENHVGKSL ALGKEEFR     + E   +       Q + F   S                  
Subjt:  GTVSDADYTKAIQIAFELRRSHRLYI--CSVHSKNNSENHVGKSLDALGKEEFRTYCLNILENGIRSLNFATLQNLCFSELS------------------

Query:  -----------------ASSFLRQRSLRTI------------PQFDIDMKTRTTDIKLSNEYSEPEGKALSKKRKSRSKTSSKKEGKALS
                          SSFL   +L  +              FDIDMKT+TTDIKL NE+SEPE KALSKKRKSRSKTSSKK+ K ++
Subjt:  -----------------ASSFLRQRSLRTI------------PQFDIDMKTRTTDIKLSNEYSEPEGKALSKKRKSRSKTSSKKEGKALS

A0A6J1FSD8 transducin beta-like protein 32.7e-1729.69Show/hide
Query:  LAEDANKPINLKAKAIVAAQDKDINSIAVAPNNSLVCSGSQ-----------------------------------------------------------
        L+ED NKP NLKAKAIVAA DKDINSIAVAPN+SLVCSGSQ                                                           
Subjt:  LAEDANKPINLKAKAIVAAQDKDINSIAVAPNNSLVCSGSQ-----------------------------------------------------------

Query:  -----------------------------------------------------------------------------------------EEGVLKG---P
                                                                                                 EEGVLKG    
Subjt:  -----------------------------------------------------------------------------------------EEGVLKG---P

Query:  GTVSDADYTKAIQIAFELRRSHRLY--ICSVHSKNNSENHVGKSLDALGKEEFRTYCLNILENGIRSLNFATLQNLC-----------------------
          VSDADY KAIQIAF+LRR HRL+     + SKN+ +NHVGK+L ALGKE+FR     +L   +R  N  T   LC                       
Subjt:  GTVSDADYTKAIQIAFELRRSHRLY--ICSVHSKNNSENHVGKSLDALGKEEFRTYCLNILENGIRSLNFATLQNLC-----------------------

Query:  -------------------FSELSASSFLRQRSLRTI---------------PQFDIDMKTRTTDIKLSNEYSEPEGKALSKKRKSRSKTSSKKEGKALS
                              L  SSFL   +L  +               P  D DMKTRT D+ L NE+++            +++T  + E KALS
Subjt:  -------------------FSELSASSFLRQRSLRTI---------------PQFDIDMKTRTTDIKLSNEYSEPEGKALSKKRKSRSKTSSKKEGKALS

Query:  KKRKS-RSKTSSKKKAKGVAY
        KKRKS +SK+S+KKKAKGVAY
Subjt:  KKRKS-RSKTSSKKKAKGVAY

A0A6J1JG41 transducin beta-like protein 38.5e-1930.4Show/hide
Query:  LAEDANKPINLKAKAIVAAQDKDINSIAVAPNNSLVCSGSQ-----------------------------------------------------------
        L+EDANKPINLKAKAIVAA DKDINSIAVAPN+SLVCSGSQ                                                           
Subjt:  LAEDANKPINLKAKAIVAAQDKDINSIAVAPNNSLVCSGSQ-----------------------------------------------------------

Query:  -----------------------------------------------------------------------------------------EEGVLKG---P
                                                                                                 EEGVLKG    
Subjt:  -----------------------------------------------------------------------------------------EEGVLKG---P

Query:  GTVSDADYTKAIQIAFELRRSHRLY--ICSVHSKNNSENHVGKSLDALGKEEFRTYCLNILENGIRSLNFATLQNLC-----------------------
          VSDADY KAIQIAF+LRR HRL+     + SKN+ +NHVGK+L ALGKE+FR     +L   +R  N  T   LC                       
Subjt:  GTVSDADYTKAIQIAFELRRSHRLY--ICSVHSKNNSENHVGKSLDALGKEEFRTYCLNILENGIRSLNFATLQNLC-----------------------

Query:  -------------------FSELSASSFLRQRSLRTI---------------PQFDIDMKTRTTDIKLSNEYSEPEGKALSKKRKSRSKTSSKKEGKALS
                              L  SSFL   +L  +               P  D DMKTRT D+ L NEY++            +++T  + E KALS
Subjt:  -------------------FSELSASSFLRQRSLRTI---------------PQFDIDMKTRTTDIKLSNEYSEPEGKALSKKRKSRSKTSSKKEGKALS

Query:  KKRKS-RSKTSSKKKAKGVAY
        KKRKS +SK+S+KKKAKGVAY
Subjt:  KKRKS-RSKTSSKKKAKGVAY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G16750.1 Transducin family protein / WD-40 repeat family protein7.9e-0961.9Show/hide
Query:  LAEDANKPINLKAKAIVAAQDKDINSIAVAPNNSLVCSGSQE
        ++ED+ +PINLK +++VAA DKDINS+AVA N+SLVC+GS++
Subjt:  LAEDANKPINLKAKAIVAAQDKDINSIAVAPNNSLVCSGSQE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGAAAGCAAAACCTGTATTGGTGTTAGCTGAGGATGCAAACAAGCCTATTAATTTGAAAGCTAAAGCCATTGTAGCTGCTCAAGACAAGGATATCAATTCCATAGC
AGTTGCACCAAATAACAGTTTAGTTTGTAGTGGTTCTCAGGAAGAAGGTGTTCTGAAAGGCCCAGGAACTGTTTCTGACGCTGACTACACCAAAGCGATTCAAATTGCCT
TTGAACTCCGTAGGTCACATAGGCTATATATTTGTTCTGTCCACAGCAAGAACAATTCTGAAAATCATGTTGGAAAGTCCCTCGATGCTCTTGGAAAGGAGGAGTTTCGT
ACGTATTGTTTGAATATCTTAGAGAATGGAATACGAAGCCTAAACTTTGCCACGTTGCAAAATTTGTGTTTTTCAGAGCTTTCAGCGTCGTCCTTCCTCCGACAGAGATC
TCTGAGGACAATCCCCCAGTTTGACATCGATATGAAAACTAGAACAACAGATATAAAGCTTTCCAACGAATATAGTGAACCAGAAGGTAAAGCTCTCTCCAAGAAACGTA
AATCCAGATCAAAAACTAGCTCAAAAAAAGAAGGTAAAGCTCTCTCCAAGAAACGTAAATCCAGATCAAAAACTAGCTCAAAAAAGAAAGCCAAGGGTGTGGCCTACATG
ATGTTGCAGTTGTACCGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAGAAAGCAAAACCTGTATTGGTGTTAGCTGAGGATGCAAACAAGCCTATTAATTTGAAAGCTAAAGCCATTGTAGCTGCTCAAGACAAGGATATCAATTCCATAGC
AGTTGCACCAAATAACAGTTTAGTTTGTAGTGGTTCTCAGGAAGAAGGTGTTCTGAAAGGCCCAGGAACTGTTTCTGACGCTGACTACACCAAAGCGATTCAAATTGCCT
TTGAACTCCGTAGGTCACATAGGCTATATATTTGTTCTGTCCACAGCAAGAACAATTCTGAAAATCATGTTGGAAAGTCCCTCGATGCTCTTGGAAAGGAGGAGTTTCGT
ACGTATTGTTTGAATATCTTAGAGAATGGAATACGAAGCCTAAACTTTGCCACGTTGCAAAATTTGTGTTTTTCAGAGCTTTCAGCGTCGTCCTTCCTCCGACAGAGATC
TCTGAGGACAATCCCCCAGTTTGACATCGATATGAAAACTAGAACAACAGATATAAAGCTTTCCAACGAATATAGTGAACCAGAAGGTAAAGCTCTCTCCAAGAAACGTA
AATCCAGATCAAAAACTAGCTCAAAAAAAGAAGGTAAAGCTCTCTCCAAGAAACGTAAATCCAGATCAAAAACTAGCTCAAAAAAGAAAGCCAAGGGTGTGGCCTACATG
ATGTTGCAGTTGTACCGTTAG
Protein sequenceShow/hide protein sequence
MQKAKPVLVLAEDANKPINLKAKAIVAAQDKDINSIAVAPNNSLVCSGSQEEGVLKGPGTVSDADYTKAIQIAFELRRSHRLYICSVHSKNNSENHVGKSLDALGKEEFR
TYCLNILENGIRSLNFATLQNLCFSELSASSFLRQRSLRTIPQFDIDMKTRTTDIKLSNEYSEPEGKALSKKRKSRSKTSSKKEGKALSKKRKSRSKTSSKKKAKGVAYM
MLQLYR