CuGenDBv2

Gene ID	Chy11G190950
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial
Genome location	chrH11:5631813..5635531
RNA-Seq Expression	Chy11G190950
Synteny	Chy11G190950
Gene Ontology terms	GO:0006120 - mitochondrial electron transport, NADH to ubiquinone (biological process) GO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domains	IPR019401 - Zinc finger, CHCC-type

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004151845.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Cucumis sativus]

1.42e-68

99.03

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Query:  MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQG
        MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKV GRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQG
Subjt:  MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQG

Query:  HHH
        HHH
Subjt:  HHH

XP_008462784.1 PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Cucumis melo]

5.77e-68

98.06

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Query:  MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQG
        MASSLFK+LLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQ 
Subjt:  MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQG

Query:  HHH
        HHH
Subjt:  HHH

XP_022943963.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Cucurbita moschata]

7.61e-64

92.23

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Query:  MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQG
        MASSLFK L+ESSS IPSS R+LSLV+NQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNP LGHPIEFICLDREEPAVCKYCGLRYTQ 
Subjt:  MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQG

Query:  HHH
        HHH
Subjt:  HHH

XP_023511819.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial-like [Cucurbita pepo subsp. pepo]

1.87e-64

93.2

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Query:  MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQG
        MASSLFK L+ESSS IPSS R+LSLV+NQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQ 
Subjt:  MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQG

Query:  HHH
        HHH
Subjt:  HHH

XP_038900460.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Benincasa hispida]

3.22e-65

94.17

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Query:  MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQG
        MASSLFK L+ESSS IPSS RNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGD+NPALGHPIEFICLDREEPAVCKYCGLRYTQ 
Subjt:  MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQG

Query:  HHH
        HHH
Subjt:  HHH

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LNG2 zf-CHCC domain-containing protein

5.9e-52

99.03

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Query:  MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQG
        MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKV GRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQG
Subjt:  MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQG

Query:  HHH
        HHH
Subjt:  HHH

A0A1S3CI88 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial

1.7e-51

98.06

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Query:  MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQG
        MASSLFK+LLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQ 
Subjt:  MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQG

Query:  HHH
        HHH
Subjt:  HHH

A0A6J1D4A8 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial

2.3e-48

90.29

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Query:  MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQG
        MAS+LFK ++ESSS  PSS RNLSLV+NQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRI+ACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQ 
Subjt:  MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQG

Query:  HHH
        HHH
Subjt:  HHH

A0A6J1FXJ3 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial

2.3e-48

92.23

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Query:  MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQG
        MASSLFK L+ESSS IPSS R+LSLV+NQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNP LGHPIEFICLDREEPAVCKYCGLRYTQ 
Subjt:  MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQG

Query:  HHH
        HHH
Subjt:  HHH

A0A6J1JEL4 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial

3.1e-48

92.23

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Query:  MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQG
        MASSLFK L+ESSS  PSS R+LSLV+NQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQ 
Subjt:  MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQG

Query:  HHH
        HHH
Subjt:  HHH

SwissProt top hits

e value

%identity

Alignment

Q9M9M6 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial

1.2e-38

69.37

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Query:  MASSLFKVLLESSSNIPSSTRNLSLVANQ--------IGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKY
        MAS+L K L+ S   +PSS RN S+   Q        +G HTAKWMQD SKKSPMELI+EVPPIKV+GRIVACEGD+NPALGHPIEFICLD  EPA+CKY
Subjt:  MASSLFKVLLESSSNIPSSTRNLSLVANQ--------IGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKY

Query:  CGLRYTQGHHH
        CGLRY Q HHH
Subjt:  CGLRYTQGHHH

Arabidopsis top hits

e value

%identity

Alignment

AT3G03070.1 NADH-ubiquinone oxidoreductase-related

8.8e-40

69.37

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Query:  MASSLFKVLLESSSNIPSSTRNLSLVANQ--------IGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKY
        MAS+L K L+ S   +PSS RN S+   Q        +G HTAKWMQD SKKSPMELI+EVPPIKV+GRIVACEGD+NPALGHPIEFICLD  EPA+CKY
Subjt:  MASSLFKVLLESSSNIPSSTRNLSLVANQ--------IGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKY

Query:  CGLRYTQGHHH
        CGLRY Q HHH
Subjt:  CGLRYTQGHHH

Sequences

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CDS sequence

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ATGGCGTCGAGTCTGTTCAAAGTGCTTCTTGAATCTTCTTCTAACATCCCATCTTCAACTAGAAATCTGAGTCTTGTTGCCAATCAAATCGGCCAGCACACCGCCAAATG
GATGCAGGATACAAGTAAGAAATCACCCATGGAGTTGATCAATGAGGTTCCACCAATCAAGGTTGAAGGCCGGATCGTTGCTTGTGAGGGAGATAGCAATCCTGCCCTTG
GACATCCAATTGAGTTCATATGCCTCGATCGGGAAGAGCCTGCTGTGTGCAAGTACTGTGGCCTGCGCTATACTCAGGGCCATCACCACTAG

mRNA sequence

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Protein sequence

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MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQGHHH

Chy11G190950 (gene) of Cucumber (hystrix) v1 genome