; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy11G191010 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy11G191010
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionTransposon Tf2-12 polyprotein
Genome locationchrH11:5716350..5718978
RNA-Seq ExpressionChy11G191010
SyntenyChy11G191010
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006952 - defense response (biological process)
GO:0007165 - signal transduction (biological process)
GO:0015074 - DNA integration (biological process)
GO:0016310 - phosphorylation (biological process)
GO:0016020 - membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003953 - NAD+ nucleosidase activity (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0016301 - kinase activity (molecular function)
GO:0043531 - ADP binding (molecular function)
InterPro domainsIPR000953 - Chromo/chromo shadow domain
IPR016197 - Chromo-like domain superfamily
IPR023780 - Chromo domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647079.1 hypothetical protein Csa_023021 [Cucumis sativus]1.09e-9784.97Show/hide
Query:  MESRAKLRRLSHTGNILDYMKEFTTLMLEISDLPEKEDLFQFRDGLKDWAK-------AATKMKKWADRKRRPKEYQVGEKVMVKLLPNQFKSLCKVHKG
        MESRAKLRRL HTGNILDY+KEFTT+MLEISDLPEKE LFQFRDGLKDWAK       AATKMKKWADRKRR +EYQVGEKVMVKLLPNQFKSL KVHKG
Subjt:  MESRAKLRRLSHTGNILDYMKEFTTLMLEISDLPEKEDLFQFRDGLKDWAK-------AATKMKKWADRKRRPKEYQVGEKVMVKLLPNQFKSLCKVHKG

Query:  LIRRYEGPFSVIERVGKAAYRL------KIHNVFHVSMLKPFYEDKEDPSISESSRAPTGMISEFNMKIKEILVERKIRRRGVPSYNEYLIAW
        LIRRYEGPFS+IE+VGKAAYRL      KIHNVFHVSMLKPFYEDKEDPS  ESSRAPTGMISEF+ KIKEIL ERKIRRRGVPSYNEYLI +
Subjt:  LIRRYEGPFSVIERVGKAAYRL------KIHNVFHVSMLKPFYEDKEDPSISESSRAPTGMISEFNMKIKEILVERKIRRRGVPSYNEYLIAW

KAE8649329.1 hypothetical protein Csa_015359 [Cucumis sativus]5.04e-12990.09Show/hide
Query:  MESRAKLRRLSHTGNILDYMKEFTTLMLEISDLPEKEDLFQFRDGLKDWAKAATKMKKWADRKRRPKEYQVGEKVMVKLLPNQFKSLCKVHKGLIRRYEG
        MESRAKLRRL HTGNILDY+KEFTTLMLEISDLP KE LFQFRDGLKDWAKAATKMKKWADRKRR KEYQVGEKVMVKLLPNQFKSL KVHKGLIRRYEG
Subjt:  MESRAKLRRLSHTGNILDYMKEFTTLMLEISDLPEKEDLFQFRDGLKDWAKAATKMKKWADRKRRPKEYQVGEKVMVKLLPNQFKSLCKVHKGLIRRYEG

Query:  PFSVIERVGKAAYRL------KIHNVFHVSMLKPFYEDKEDPSISESSRAPTGMISEFNMKIKEILVERKIRRRGVPSYNEYLIAWEGLPESEASWEKED
        PFS+I+RVGKAAYRL      KIHNVFHVSMLK FYEDKEDPSISESSRAPT MISEFN KIKEILVERKIRRR VPSYNEYLIAWEGL E+EASWEKED
Subjt:  PFSVIERVGKAAYRL------KIHNVFHVSMLKPFYEDKEDPSISESSRAPTGMISEFNMKIKEILVERKIRRRGVPSYNEYLIAWEGLPESEASWEKED

Query:  TIWQFQDEIRRF
        T+WQFQDEIRRF
Subjt:  TIWQFQDEIRRF

KAE8653039.1 hypothetical protein Csa_019702 [Cucumis sativus]1.60e-9677.57Show/hide
Query:  MESRAKLRRLSHTG-NILDYMKEFTTLMLEISDLPEKEDLFQFRDGLKDWAKAATKMKKWADRKRRPKEYQVGEKVMVKLLPNQFKSLCKVHKGLIRRYE
        MESRAKLRRL HTG N   Y  +F     E  D+         R  L   AKAATKMKKWADRKRR +EYQVGEKVMVKLLPNQFKSL KVHKGLIRRYE
Subjt:  MESRAKLRRLSHTG-NILDYMKEFTTLMLEISDLPEKEDLFQFRDGLKDWAKAATKMKKWADRKRRPKEYQVGEKVMVKLLPNQFKSLCKVHKGLIRRYE

Query:  GPFSVIERVGKAAYRL------KIHNVFHVSMLKPFYEDKEDPSISESSRAPTGMISEFNMKIKEILVERKIRRRGVPSYNEYLIAWEGLPESEASWEKE
        GPFS+IE+VGKAAYRL      KIHNVFHVSMLKPFYEDKEDPS  ESSRAPTGMISEF+ KIKEIL ERKIRRRGVPSYNEYLIAWEGLPESEASWEKE
Subjt:  GPFSVIERVGKAAYRL------KIHNVFHVSMLKPFYEDKEDPSISESSRAPTGMISEFNMKIKEILVERKIRRRGVPSYNEYLIAWEGLPESEASWEKE

Query:  DTIWQFQDEIRRFK
        DT+WQFQDEIRRF+
Subjt:  DTIWQFQDEIRRFK

KAE8653146.1 hypothetical protein Csa_019871, partial [Cucumis sativus]2.00e-12586.36Show/hide
Query:  MESRAKLRRLSHTGNILDYMKEFTTLMLEISDLPEKEDLFQFRDGLKDWAK-------AATKMKKWADRKRRPKEYQVGEKVMVKLLPNQFKSLCKVHKG
        MESRAKLR L HTGNILDY+KEFTT+MLEISDLPEKE LFQFRDGLKDWAK       AATKMKKWADRKRR +EYQVGEKVMVKLLPNQFKSL KVHKG
Subjt:  MESRAKLRRLSHTGNILDYMKEFTTLMLEISDLPEKEDLFQFRDGLKDWAK-------AATKMKKWADRKRRPKEYQVGEKVMVKLLPNQFKSLCKVHKG

Query:  LIRRYEGPFSVIERVGKAAYRL------KIHNVFHVSMLKPFYEDKEDPSISESSRAPTGMISEFNMKIKEILVERKIRRRGVPSYNEYLIAWEGLPESE
        LIRRYEGPFS+IE+VGKAAYRL      KIHNVFHVSMLKPFYEDKEDPS  ESSRAPTGMISEF+ KIKEIL ERKIRRRGVPSYNEYLIAWEGLPESE
Subjt:  LIRRYEGPFSVIERVGKAAYRL------KIHNVFHVSMLKPFYEDKEDPSISESSRAPTGMISEFNMKIKEILVERKIRRRGVPSYNEYLIAWEGLPESE

Query:  ASWEKEDTIWQFQDEIRRFK
        ASWEKEDT+WQFQDEIRRF+
Subjt:  ASWEKEDTIWQFQDEIRRFK

KGN50791.2 hypothetical protein Csa_018527 [Cucumis sativus]1.36e-11873.18Show/hide
Query:  MESRAKLRRLSHTGNILDYMKEFTTLMLEISDLPEKEDLFQFRDGLKDW------------------------------------------------AKA
        MESRAKLRRL HTGNILDY+KEFTT+MLEISDLPEKE LFQFRDGLKDW                                                AKA
Subjt:  MESRAKLRRLSHTGNILDYMKEFTTLMLEISDLPEKEDLFQFRDGLKDW------------------------------------------------AKA

Query:  ATKMKKWADRKRRPKEYQVGEKVMVKLLPNQFKSLCKVHKGLIRRYEGPFSVIERVGKAAYRL------KIHNVFHVSMLKPFYEDKEDPSISESSRAPT
        ATKMKKWADRKRR +EYQVGEKVMVKLLPNQFKSL KVHKGLIRRYEGPFS+IE+VGKAAYRL      KIHNVFHVSMLKPFYEDKEDPS  ESSRAPT
Subjt:  ATKMKKWADRKRRPKEYQVGEKVMVKLLPNQFKSLCKVHKGLIRRYEGPFSVIERVGKAAYRL------KIHNVFHVSMLKPFYEDKEDPSISESSRAPT

Query:  GMISEFNMKIKEILVERKIRRRGVPSYNEYLIAWEGLPESEASWEKEDTIWQFQDEIRRFK
        GMISEF+ KIKEIL ERKIRRRGVPSYNEYLIAWEGLPESEASWEKEDT+WQFQDEIRRF+
Subjt:  GMISEFNMKIKEILVERKIRRRGVPSYNEYLIAWEGLPESEASWEKEDTIWQFQDEIRRFK

TrEMBL top hitse value%identityAlignment
A0A5A7UCY6 Reverse transcriptase1.5e-6777.91Show/hide
Query:  KAATKMKKWADRKRRPKEYQVGEKVMVKLLPNQFKSLCKVHKGLIRRYEGPFSVIERVGKAAY------RLKIHNVFHVSMLKPFYEDKEDPSISESSRA
        KAA +MKKWAD+KRRPKEY++G+KV+VKLLPNQFKSL KVHKGL+RRYEGPFS+IERVGKAAY      RLKIHNVFHVSMLKPF+ED+EDP+ S++SRA
Subjt:  KAATKMKKWADRKRRPKEYQVGEKVMVKLLPNQFKSLCKVHKGLIRRYEGPFSVIERVGKAAY------RLKIHNVFHVSMLKPFYEDKEDPSISESSRA

Query:  PTGMISEFNMKIKEILVERKIRRRGVPSYNEYLIAWEGLPESEASWEKEDTIWQFQDEIRRFK
        PTG+I+EF+ KIKEIL ERKIRRRGVPS++EYLI WEGLPESEASWE+ED +WQFQ EI +FK
Subjt:  PTGMISEFNMKIKEILVERKIRRRGVPSYNEYLIAWEGLPESEASWEKEDTIWQFQDEIRRFK

A0A5A7UJ25 Polyprotein4.5e-6777.91Show/hide
Query:  KAATKMKKWADRKRRPKEYQVGEKVMVKLLPNQFKSLCKVHKGLIRRYEGPFSVIERVGKAAY------RLKIHNVFHVSMLKPFYEDKEDPSISESSRA
        KAA +MKKWAD+KRRPKEY++G+KV+VKLLPNQFKSL KVHKGL+RRYEGPFS+IERVGKAAY      RLKIHNVFHVSMLKPF+ED+EDP+ S++SRA
Subjt:  KAATKMKKWADRKRRPKEYQVGEKVMVKLLPNQFKSLCKVHKGLIRRYEGPFSVIERVGKAAY------RLKIHNVFHVSMLKPFYEDKEDPSISESSRA

Query:  PTGMISEFNMKIKEILVERKIRRRGVPSYNEYLIAWEGLPESEASWEKEDTIWQFQDEIRRFK
        PTG+I EF+ KIKEIL ERKIRRRGVPS++EYLI WEGLPESEASWE+ED +WQFQ EI +FK
Subjt:  PTGMISEFNMKIKEILVERKIRRRGVPSYNEYLIAWEGLPESEASWEKEDTIWQFQDEIRRFK

A0A5A7VEX8 Polyprotein2.0e-6777.3Show/hide
Query:  KAATKMKKWADRKRRPKEYQVGEKVMVKLLPNQFKSLCKVHKGLIRRYEGPFSVIERVGKAAY------RLKIHNVFHVSMLKPFYEDKEDPSISESSRA
        KAA +MKKWAD+KRRPKEY++G+KV+VKLLPNQFKSL KVHKGL+RRYEGPFS+IERVGKAAY      RLKIHNVFH+SMLKPF+ED+EDP+ S++SRA
Subjt:  KAATKMKKWADRKRRPKEYQVGEKVMVKLLPNQFKSLCKVHKGLIRRYEGPFSVIERVGKAAY------RLKIHNVFHVSMLKPFYEDKEDPSISESSRA

Query:  PTGMISEFNMKIKEILVERKIRRRGVPSYNEYLIAWEGLPESEASWEKEDTIWQFQDEIRRFK
        PTG+I+EF+ KIKEIL ERKIRRRGVPS++EYLI WEGLPESEASWE+ED +WQFQ EI +FK
Subjt:  PTGMISEFNMKIKEILVERKIRRRGVPSYNEYLIAWEGLPESEASWEKEDTIWQFQDEIRRFK

A0A5A7VEX8 Polyprotein2.0e-1482.35Show/hide
Query:  MESRAKLRRLSHTGNILDYMKEFTTLMLEISDLPEKEDLFQFRDGLKDWAK
        +ESR KLRRL HTG+IL+Y+KEFTTLMLEI DLPEKE LFQF+DGLKDWAK
Subjt:  MESRAKLRRLSHTGNILDYMKEFTTLMLEISDLPEKEDLFQFRDGLKDWAK

A0A5A7VEX8 Polyprotein2.6e-6777.91Show/hide
Query:  KAATKMKKWADRKRRPKEYQVGEKVMVKLLPNQFKSLCKVHKGLIRRYEGPFSVIERVGKAAY------RLKIHNVFHVSMLKPFYEDKEDPSISESSRA
        KAA +MKKWAD+KRRPKEY++GEKV+VKLLP+QFKSL KVHKGL+RRYEGPFS+IERVGKAAY      RLKIHNVFHVSMLKP +ED+EDP  SE+SRA
Subjt:  KAATKMKKWADRKRRPKEYQVGEKVMVKLLPNQFKSLCKVHKGLIRRYEGPFSVIERVGKAAY------RLKIHNVFHVSMLKPFYEDKEDPSISESSRA

Query:  PTGMISEFNMKIKEILVERKIRRRGVPSYNEYLIAWEGLPESEASWEKEDTIWQFQDEIRRFK
        PTG+++EF+ KIKEIL ERKIRRRGVPSY+EYLI WEGLPESEASWE+ED +WQFQ EI +FK
Subjt:  PTGMISEFNMKIKEILVERKIRRRGVPSYNEYLIAWEGLPESEASWEKEDTIWQFQDEIRRFK

A0A5D3BX70 Chromo domain-containing protein1.5e-6777.3Show/hide
Query:  KAATKMKKWADRKRRPKEYQVGEKVMVKLLPNQFKSLCKVHKGLIRRYEGPFSVIERVGKAAY------RLKIHNVFHVSMLKPFYEDKEDPSISESSRA
        KAA +MKKWAD+KRRPKEY++GEKV+VKLLPNQFKSL KVHKGL+RRY+GPFS+IERVGKAAY      +LKIHNVFHVSMLKPF+ED+EDP+ SE+SRA
Subjt:  KAATKMKKWADRKRRPKEYQVGEKVMVKLLPNQFKSLCKVHKGLIRRYEGPFSVIERVGKAAY------RLKIHNVFHVSMLKPFYEDKEDPSISESSRA

Query:  PTGMISEFNMKIKEILVERKIRRRGVPSYNEYLIAWEGLPESEASWEKEDTIWQFQDEIRRFK
        PTG+++EF+ KIKEIL ERKIRRRGVPS++EYLI WEGLPESEASWE+ED +WQFQ EI +FK
Subjt:  PTGMISEFNMKIKEILVERKIRRRGVPSYNEYLIAWEGLPESEASWEKEDTIWQFQDEIRRFK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTCTCGAGCCAAACTTCGAAGGCTTAGCCACACAGGTAACATTCTTGATTACATGAAAGAATTTACCACCCTTATGCTTGAAATTAGTGATCTACCCGAAAAGGA
AGACTTATTCCAATTCAGAGACGGACTGAAGGATTGGGCTAAAGCCGCCACAAAGATGAAAAAGTGGGCGGATCGGAAAAGGAGGCCCAAAGAGTACCAAGTAGGAGAAA
AAGTAATGGTAAAGCTACTACCTAACCAGTTTAAATCCCTATGTAAGGTACATAAGGGCTTAATCCGAAGATACGAAGGCCCCTTCTCTGTCATTGAGAGAGTGGGGAAA
GCAGCCTACAGACTGAAGATCCATAATGTCTTCCATGTGAGCATGTTAAAGCCCTTTTATGAAGACAAAGAGGATCCAAGCATAAGTGAGTCCTCTCGTGCACCCACCGG
CATGATCTCAGAATTCAACATGAAAATCAAAGAGATCTTAGTAGAGAGGAAGATACGAAGGAGAGGAGTTCCCAGTTATAACGAATACTTGATCGCTTGGGAAGGACTAC
CGGAGAGCGAAGCTAGTTGGGAGAAGGAAGACACCATATGGCAATTTCAAGATGAAATCAGAAGATTTAAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGTCTCGAGCCAAACTTCGAAGGCTTAGCCACACAGGTAACATTCTTGATTACATGAAAGAATTTACCACCCTTATGCTTGAAATTAGTGATCTACCCGAAAAGGA
AGACTTATTCCAATTCAGAGACGGACTGAAGGATTGGGCTAAAGCCGCCACAAAGATGAAAAAGTGGGCGGATCGGAAAAGGAGGCCCAAAGAGTACCAAGTAGGAGAAA
AAGTAATGGTAAAGCTACTACCTAACCAGTTTAAATCCCTATGTAAGGTACATAAGGGCTTAATCCGAAGATACGAAGGCCCCTTCTCTGTCATTGAGAGAGTGGGGAAA
GCAGCCTACAGACTGAAGATCCATAATGTCTTCCATGTGAGCATGTTAAAGCCCTTTTATGAAGACAAAGAGGATCCAAGCATAAGTGAGTCCTCTCGTGCACCCACCGG
CATGATCTCAGAATTCAACATGAAAATCAAAGAGATCTTAGTAGAGAGGAAGATACGAAGGAGAGGAGTTCCCAGTTATAACGAATACTTGATCGCTTGGGAAGGACTAC
CGGAGAGCGAAGCTAGTTGGGAGAAGGAAGACACCATATGGCAATTTCAAGATGAAATCAGAAGATTTAAA
Protein sequenceShow/hide protein sequence
MESRAKLRRLSHTGNILDYMKEFTTLMLEISDLPEKEDLFQFRDGLKDWAKAATKMKKWADRKRRPKEYQVGEKVMVKLLPNQFKSLCKVHKGLIRRYEGPFSVIERVGK
AAYRLKIHNVFHVSMLKPFYEDKEDPSISESSRAPTGMISEFNMKIKEILVERKIRRRGVPSYNEYLIAWEGLPESEASWEKEDTIWQFQDEIRRFK