; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy11G191070 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy11G191070
OrganismCucumis hystrix (Cucumber (hystrix) v1)
Descriptionbinding partner of ACD11 1-like
Genome locationchrH11:5781997..5789610
RNA-Seq ExpressionChy11G191070
SyntenyChy11G191070
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652335.1 hypothetical protein Csa_022102 [Cucumis sativus]1.85e-19188.72Show/hide
Query:  MLLFADNATKLTVFSKHFMGILKASDCSVKVRIEFNEESQ----------------------------------SQTRTVQVKHVSDLATEREIHEFFSF
        MLLFADNAT+LT FSKHFMGILKASD SVKVRIEFNEESQ                                  SQTRTVQVKHVSDLATEREIHEFFSF
Subjt:  MLLFADNATKLTVFSKHFMGILKASDCSVKVRIEFNEESQ----------------------------------SQTRTVQVKHVSDLATEREIHEFFSF

Query:  SGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLTPTENNSPSIEDSASQPSSGKMYVNRAQE
        SGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLTPTENNSPSIEDSASQPSSGKMYVNRAQE
Subjt:  SGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLTPTENNSPSIEDSASQPSSGKMYVNRAQE

Query:  VVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTA
        VVATVLAKGSAIGQDAMNKAKAFDEKH+LTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTA
Subjt:  VVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTA

Query:  SAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISK
        SAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISK
Subjt:  SAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISK

XP_004151849.1 binding partner of ACD11 1 [Cucumis sativus]8.05e-17499.62Show/hide
Query:  QSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLTP
        QSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLTP
Subjt:  QSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLTP

Query:  TENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDK
        TENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKH+LTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDK
Subjt:  TENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDK

Query:  TMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISK
        TMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISK
Subjt:  TMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISK

XP_008462804.1 PREDICTED: binding partner of ACD11 1-like [Cucumis melo]3.81e-17298.86Show/hide
Query:  QSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLTP
        QSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRRE+QEVRVADNAACLTP
Subjt:  QSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLTP

Query:  TENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDK
        TENNSPS EDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKH+LTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDK
Subjt:  TENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDK

Query:  TMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISK
        TMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISK
Subjt:  TMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISK

XP_022950330.1 binding partner of ACD11 1 [Cucurbita moschata]2.00e-16092.05Show/hide
Query:  QSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLTP
        QSQTRTVQ ++VSDLATEREIHEFFSFSGEIEH+EIQCEQG+SKTAFVTF DPKALEIALLLSGATIVD+IVSI+PAEN+VPRREMQEVR  DNAA LTP
Subjt:  QSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLTP

Query:  TENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDK
        TENN PSIEDSASQPSSG+MYVNRAQEVVA+VLAKGSAIGQDAMNKAKAFDEKH+LTASASAKVLSFDR+VGLTEKLTVGISVVNEKVKSVDQKLHVSDK
Subjt:  TENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDK

Query:  TMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISK
        TMAAIFAAERK+NDTGSAVKTSKYVT+ AAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNL SK
Subjt:  TMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISK

XP_038881171.1 binding partner of ACD11 1-like isoform X2 [Benincasa hispida]3.13e-16495.08Show/hide
Query:  QSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLTP
        QSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQG+SKTAFVTF DPKALEIALLLSGATIVD+IVSI+ AENHVPRREMQEVRV DNAACLTP
Subjt:  QSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLTP

Query:  TENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDK
        TENN PS EDSASQPSSGKMYVNRAQ VVATVLAKGSAIGQDAMNKAKAFDEKH+LTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQ LHVSDK
Subjt:  TENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDK

Query:  TMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISK
        TMAAIFAAERKLNDTGSAVKTSKYVTA AAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNL SK
Subjt:  TMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISK

TrEMBL top hitse value%identityAlignment
A0A0A0LNE8 RRM domain-containing protein1.0e-13599.62Show/hide
Query:  QSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLTP
        QSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLTP
Subjt:  QSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLTP

Query:  TENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDK
        TENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKH+LTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDK
Subjt:  TENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDK

Query:  TMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISK
        TMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISK
Subjt:  TMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISK

A0A1S3CIA3 binding partner of ACD11 1-like1.9e-13498.86Show/hide
Query:  QSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLTP
        QSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRRE+QEVRVADNAACLTP
Subjt:  QSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLTP

Query:  TENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDK
        TENNSPS EDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKH+LTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDK
Subjt:  TENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDK

Query:  TMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISK
        TMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISK
Subjt:  TMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISK

A0A5D3BPG7 Binding partner of ACD11 1-like1.9e-13498.86Show/hide
Query:  QSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLTP
        QSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRRE+QEVRVADNAACLTP
Subjt:  QSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLTP

Query:  TENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDK
        TENNSPS EDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKH+LTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDK
Subjt:  TENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDK

Query:  TMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISK
        TMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISK
Subjt:  TMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISK

A0A6J1GFF4 binding partner of ACD11 11.6e-12592.05Show/hide
Query:  QSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLTP
        QSQTRTVQ ++VSDLATEREIHEFFSFSGEIEH+EIQCEQG+SKTAFVTF DPKALEIALLLSGATIVD+IVSI+PAEN+VPRREMQEVR  DNAA LTP
Subjt:  QSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLTP

Query:  TENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDK
        TENN PSIEDSASQPSSG+MYVNRAQEVVA+VLAKGSAIGQDAMNKAKAFDEKH+LTASASAKVLSFDR+VGLTEKLTVGISVVNEKVKSVDQKLHVSDK
Subjt:  TENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDK

Query:  TMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISK
        TMAAIFAAERK+NDTGSAVKTSKYVT+ AAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNL SK
Subjt:  TMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISK

A0A6J1IKN1 binding partner of ACD11 11.6e-12592.05Show/hide
Query:  QSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLTP
        QSQTRTVQ ++VSDLATEREIHEFFSFSGEIEH+EIQCEQG+SKTAFVTF DPKALEIALLLSGATIVD+IVSI+PAEN+VPRREMQEVR  DNAA LTP
Subjt:  QSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLTP

Query:  TENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDK
        TENN PSIEDSASQPSSG+MYVNRAQEVVA+VLAKGSAIGQDAMNKAKAFDEKH+LTASASAKVLSFDR+VGLTEKLTVGISVVNEKVKSVDQKLHVSDK
Subjt:  TENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDK

Query:  TMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISK
        TMAAIFAAERK+NDTGSAVKTSKYVT+ AAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNL SK
Subjt:  TMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISK

SwissProt top hitse value%identityAlignment
P87216 Protein vip11.2e-0522.27Show/hide
Query:  VQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLTPTENNSP
        V V ++S   TE++I +FFSF G++ +I  + + GE++TA + F  P A + ALLL  A +    + IT                +++    + T+    
Subjt:  VQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLTPTENNSP

Query:  SIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTMAAIF
          + +A Q    +        +++ +L++G  +    + K+   D+ + +++             G+ E    G+  VNE+    ++   V +K     F
Subjt:  SIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTMAAIF

Query:  AAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLI
        A   KLN T S V T  +     A           AG +AG K +  +    + L+
Subjt:  AAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLI

Q9LFD5 Binding partner of ACD11 13.6e-4542.46Show/hide
Query:  SQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLTPT
        SQ R+V+V ++S  ATE +I EFFSFSGE+E I+IQ  +    +A+VTF + +  E A+LLSGA+I D+ V I  A N+ P                   
Subjt:  SQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLTPT

Query:  ENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKT
            P+   + +Q S  +  V +A++VV+++LAKG  +G+DA+ KAKAFDEKH  T++A+A V S D+++GL++KLT G S+VNEK+K+VDQ   V+++T
Subjt:  ENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKT

Query:  MAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREK
         +   AAE+ ++  GSAV  ++YV    +W  GAF +VA+A    G KT+EK
Subjt:  MAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREK

Arabidopsis top hitse value%identityAlignment
AT4G17720.1 RNA-binding (RRM/RBD/RNP motifs) family protein5.9e-5145.24Show/hide
Query:  TVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLTPTENNS
        TV+V +VS  AT+R++ EFFSFSG+I ++E Q E   +K A+VTF D +  E A+LLSGATIVD  V ++ A ++                 L+P    S
Subjt:  TVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLTPTENNS

Query:  PSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTMAAI
           +DS   P +G   + +A++VV+++LAKG  +G+DA+ KAK+ DEKH+LT++ASAKV SFD+++G T+K+  G  VV EKV+ VDQK  VS+KT +AI
Subjt:  PSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTMAAI

Query:  FAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLA
         AAE+ +++ GSA+  ++YV   A W+ GAF KVAKA +  G K +EK  +A
Subjt:  FAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLA

AT5G16840.1 binding partner of acd11 12.5e-4642.46Show/hide
Query:  SQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLTPT
        SQ R+V+V ++S  ATE +I EFFSFSGE+E I+IQ  +    +A+VTF + +  E A+LLSGA+I D+ V I  A N+ P                   
Subjt:  SQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLTPT

Query:  ENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKT
            P+   + +Q S  +  V +A++VV+++LAKG  +G+DA+ KAKAFDEKH  T++A+A V S D+++GL++KLT G S+VNEK+K+VDQ   V+++T
Subjt:  ENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKT

Query:  MAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREK
         +   AAE+ ++  GSAV  ++YV    +W  GAF +VA+A    G KT+EK
Subjt:  MAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREK

AT5G16840.2 binding partner of acd11 12.0e-4642.86Show/hide
Query:  SQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLTPT
        SQ R+V+V ++S  ATE +I EFFSFSGE+E I+IQ     S  A+VTF + +  E A+LLSGA+I D+ V I  A N+ P                   
Subjt:  SQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLTPT

Query:  ENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKT
            P+   + +Q S  +  V +A++VV+++LAKG  +G+DA+ KAKAFDEKH  T++A+A V S D+++GL++KLT G S+VNEK+K+VDQ   V+++T
Subjt:  ENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKT

Query:  MAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREK
         +   AAE+ ++  GSAV  ++YV    +W  GAF +VA+A    G KT+EK
Subjt:  MAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREK

AT5G32450.1 RNA binding (RRM/RBD/RNP motifs) family protein1.4e-9773.95Show/hide
Query:  TRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLTPTEN
        TR+VQV +VSDLATEREIHEFFSFSG+IEHIEIQ E G+S+ AFVTFTDPKALEIALLLSGATIVD+IV+IT AEN+V RRE QEVR+ DNA  L   E+
Subjt:  TRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLTPTEN

Query:  NSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTMA
         +   +   +   + + YV++AQ+VVATVLAKGSA+GQDA+NKAKAFDEKH+L A+ASAKV SFD+RVGLTEKL+VGIS VNEKVKSVDQKL VSDKTMA
Subjt:  NSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTMA

Query:  AIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISK
        AIFAAERKLNDTGSAVK+S+YVTA AAW +GAF KVA+ GQ AG+KT+EKF+LA+SN+ SK
Subjt:  AIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISK

AT5G46870.1 RNA-binding (RRM/RBD/RNP motifs) family protein5.0e-5044.05Show/hide
Query:  TVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLTPTENNS
        TV+V +VS  ATER++ EFFSFSG+I ++E Q E   SK A+VTF D +  E A+LL+G+TIVD  V++T +    P  ++    +A   +     +++S
Subjt:  TVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLTPTENNS

Query:  PSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTMAAI
        P+ ED +           +A++VV+ +++KG  +G+DA+ KAK+ DEKH+LT++ASA+V SFD+R+G TEK+  G +VV+EKVK VDQK  V++KT +AI
Subjt:  PSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTMAAI

Query:  FAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLA
         AAE+ +++ GSA+  ++YV   A W+ GAF +V+KA +  G K +EK  LA
Subjt:  FAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCCTCTTTGCTGACAATGCAACAAAGTTGACGGTGTTTTCAAAGCATTTCATGGGGATTTTGAAAGCTTCAGACTGCAGTGTCAAAGTTCGCATAGAGTTTAATGA
AGAAAGTCAGTCTCAGACTCGGACGGTTCAAGTCAAGCACGTTTCGGATCTAGCTACTGAGAGGGAGATTCACGAGTTCTTCTCCTTCTCTGGAGAAATTGAGCACATAG
AGATTCAATGTGAACAAGGGGAATCCAAGACTGCGTTTGTTACATTTACAGATCCTAAAGCTCTTGAAATTGCCTTGTTGTTATCGGGAGCAACAATTGTGGATAAGATC
GTGAGCATAACTCCTGCTGAAAATCATGTACCAAGAAGAGAAATGCAGGAAGTACGGGTTGCAGACAATGCTGCATGTCTCACGCCTACAGAAAATAATTCTCCTAGCAT
TGAGGATTCTGCGAGCCAGCCTAGCAGTGGAAAAATGTATGTTAATAGAGCACAAGAAGTAGTCGCAACTGTGCTTGCTAAAGGTTCAGCAATTGGACAAGATGCCATGA
ACAAGGCAAAAGCATTTGACGAAAAACATCGGTTAACAGCCAGTGCATCTGCAAAAGTATTATCCTTTGACAGAAGGGTTGGGCTTACAGAGAAATTAACAGTTGGGATA
TCAGTGGTTAACGAGAAAGTCAAGTCTGTGGATCAAAAGCTTCATGTTTCAGATAAAACAATGGCTGCAATCTTCGCAGCTGAGAGGAAACTCAATGATACAGGCTCTGC
TGTCAAAACAAGCAAGTATGTGACAGCAAGTGCTGCATGGCTAAATGGCGCTTTTGGCAAGGTCGCTAAAGCAGGGCAAGCAGCAGGTACAAAAACCAGAGAAAAGTTCC
ATTTGGCTATGTCAAACTTAATTTCAAAGGTGCGTTTTAGAAATGAAACTCTTTTCTATGACGACTTTAAAGTTGAGATTCTTTGGGAAATAGCTTTCTTGAACCCCCAG
TTGTTGCCTAATCTTAAAACTTACCGCTCACTTGGCTTGGTTGCTTGTATTTTCAGTGAGGTATTGAAATTAGTTTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTCCTCTTTGCTGACAATGCAACAAAGTTGACGGTGTTTTCAAAGCATTTCATGGGGATTTTGAAAGCTTCAGACTGCAGTGTCAAAGTTCGCATAGAGTTTAATGA
AGAAAGTCAGTCTCAGACTCGGACGGTTCAAGTCAAGCACGTTTCGGATCTAGCTACTGAGAGGGAGATTCACGAGTTCTTCTCCTTCTCTGGAGAAATTGAGCACATAG
AGATTCAATGTGAACAAGGGGAATCCAAGACTGCGTTTGTTACATTTACAGATCCTAAAGCTCTTGAAATTGCCTTGTTGTTATCGGGAGCAACAATTGTGGATAAGATC
GTGAGCATAACTCCTGCTGAAAATCATGTACCAAGAAGAGAAATGCAGGAAGTACGGGTTGCAGACAATGCTGCATGTCTCACGCCTACAGAAAATAATTCTCCTAGCAT
TGAGGATTCTGCGAGCCAGCCTAGCAGTGGAAAAATGTATGTTAATAGAGCACAAGAAGTAGTCGCAACTGTGCTTGCTAAAGGTTCAGCAATTGGACAAGATGCCATGA
ACAAGGCAAAAGCATTTGACGAAAAACATCGGTTAACAGCCAGTGCATCTGCAAAAGTATTATCCTTTGACAGAAGGGTTGGGCTTACAGAGAAATTAACAGTTGGGATA
TCAGTGGTTAACGAGAAAGTCAAGTCTGTGGATCAAAAGCTTCATGTTTCAGATAAAACAATGGCTGCAATCTTCGCAGCTGAGAGGAAACTCAATGATACAGGCTCTGC
TGTCAAAACAAGCAAGTATGTGACAGCAAGTGCTGCATGGCTAAATGGCGCTTTTGGCAAGGTCGCTAAAGCAGGGCAAGCAGCAGGTACAAAAACCAGAGAAAAGTTCC
ATTTGGCTATGTCAAACTTAATTTCAAAGGTGCGTTTTAGAAATGAAACTCTTTTCTATGACGACTTTAAAGTTGAGATTCTTTGGGAAATAGCTTTCTTGAACCCCCAG
TTGTTGCCTAATCTTAAAACTTACCGCTCACTTGGCTTGGTTGCTTGTATTTTCAGTGAGGTATTGAAATTAGTTTCTTGA
Protein sequenceShow/hide protein sequence
MLLFADNATKLTVFSKHFMGILKASDCSVKVRIEFNEESQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKI
VSITPAENHVPRREMQEVRVADNAACLTPTENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGI
SVVNEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISKVRFRNETLFYDDFKVEILWEIAFLNPQ
LLPNLKTYRSLGLVACIFSEVLKLVS