CuGenDBv2

Gene ID	Chy11G191090
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Transmembrane protein 18
Genome location	chrH11:5825438..5827058
RNA-Seq Expression	Chy11G191090
Synteny	Chy11G191090
Gene Ontology terms	GO:0009846 - pollen germination (biological process) GO:0009860 - pollen tube growth (biological process) GO:0052543 - callose deposition in cell wall (biological process) GO:0005640 - nuclear outer membrane (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR026721 - Transmembrane protein 18

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008462809.1 PREDICTED: transmembrane protein 18 [Cucumis melo]

1.93e-106

95.71

Show/hide

Query:  MDELRSVMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGLLLIITILTRKRTNFQMFLFLLALAGVYFAERINRILSKNW
        MDELRS MEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGLLLIITI TRKRTNFQMFLFL ALAGVYFAE IN+ILSKNW
Subjt:  MDELRSVMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGLLLIITILTRKRTNFQMFLFLLALAGVYFAERINRILSKNW

Query:  KNFATQNYFDPNGVFLSALWSGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED
        K FATQNYFDPNGVFLSALW GPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED
Subjt:  KNFATQNYFDPNGVFLSALWSGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED

XP_011650049.1 transmembrane protein 18 [Cucumis sativus]

1.41e-108

98.16

Show/hide

Query:  MDELRSVMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGLLLIITILTRKRTNFQMFLFLLALAGVYFAERINRILSKNW
        MDELRSVMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGLLLIITI TRKRTNFQMFLFLLALAGVYFAE IN ILSKNW
Subjt:  MDELRSVMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGLLLIITILTRKRTNFQMFLFLLALAGVYFAERINRILSKNW

Query:  KNFATQNYFDPNGVFLSALWSGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED
        KNFATQNYFDPNGVFLSALWSGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED
Subjt:  KNFATQNYFDPNGVFLSALWSGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED

XP_022949841.1 transmembrane protein 18 [Cucurbita moschata]

1.11e-105

93.87

Show/hide

Query:  MDELRSVMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGLLLIITILTRKRTNFQMFLFLLALAGVYFAERINRILSKNW
        M+ELRS MEEHMDQM+DL+QKLSSELRSGLRPA+DNFIGFFHAIDWKEPWLMGLLGFHGLLLIITI TRK TNFQMFLFLLALAGVYFAERINRILSKNW
Subjt:  MDELRSVMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGLLLIITILTRKRTNFQMFLFLLALAGVYFAERINRILSKNW

Query:  KNFATQNYFDPNGVFLSALWSGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED
        KNFATQNYFDPNGVFLS LWSGPLLVISMIILINTLFTLCYLVVRWKRAELR+RARLSQ+KED
Subjt:  KNFATQNYFDPNGVFLSALWSGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED

XP_023543279.1 transmembrane protein 18 [Cucurbita pepo subsp. pepo]

4.54e-105

93.25

Show/hide

Query:  MDELRSVMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGLLLIITILTRKRTNFQMFLFLLALAGVYFAERINRILSKNW
        M+ELRS MEEHMDQM+DL+QKLSSELRSGLRPA+DNFIGFFHAIDWKEPWL+GLLGFHGLLLIITI TRK TNFQMFLFLLALAGVYFAERINRILSKNW
Subjt:  MDELRSVMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGLLLIITILTRKRTNFQMFLFLLALAGVYFAERINRILSKNW

Query:  KNFATQNYFDPNGVFLSALWSGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED
        KNFATQNYFDPNGVFLS LWSGPLL+ISMIILINTLFTLCYLVVRWKRAELR+RARLSQSKED
Subjt:  KNFATQNYFDPNGVFLSALWSGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED

XP_038900756.1 transmembrane protein 18 [Benincasa hispida]

2.34e-107

94.48

Show/hide

Query:  MDELRSVMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGLLLIITILTRKRTNFQMFLFLLALAGVYFAERINRILSKNW
        M+ELRS MEEHMDQM+DLIQK+SSELRSG+RPA+DNF+GFFHAIDWKEPWLMGLLGFHGLLLIITI TRKRTNFQMFLFLLALAGVYFAERINRILSKNW
Subjt:  MDELRSVMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGLLLIITILTRKRTNFQMFLFLLALAGVYFAERINRILSKNW

Query:  KNFATQNYFDPNGVFLSALWSGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED
        KNFATQNYFDPNGVFLSALWSGPLLVISMIILINTLFTLC+LVVRWKRAELRHRARLSQSKED
Subjt:  KNFATQNYFDPNGVFLSALWSGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LN62 Transmembrane protein 18

6.0e-83

98.16

Show/hide

Query:  MDELRSVMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGLLLIITILTRKRTNFQMFLFLLALAGVYFAERINRILSKNW
        MDELRSVMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGLLLIITI TRKRTNFQMFLFLLALAGVYFAE IN ILSKNW
Subjt:  MDELRSVMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGLLLIITILTRKRTNFQMFLFLLALAGVYFAERINRILSKNW

Query:  KNFATQNYFDPNGVFLSALWSGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED
        KNFATQNYFDPNGVFLSALWSGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED
Subjt:  KNFATQNYFDPNGVFLSALWSGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED

A0A1S3CHQ8 Transmembrane protein 18

2.5e-81

95.71

Show/hide

Query:  MDELRSVMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGLLLIITILTRKRTNFQMFLFLLALAGVYFAERINRILSKNW
        MDELRS MEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGLLLIITI TRKRTNFQMFLFL ALAGVYFAE IN+ILSKNW
Subjt:  MDELRSVMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGLLLIITILTRKRTNFQMFLFLLALAGVYFAERINRILSKNW

Query:  KNFATQNYFDPNGVFLSALWSGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED
        K FATQNYFDPNGVFLSALW GPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED
Subjt:  KNFATQNYFDPNGVFLSALWSGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED

A0A5A7VF36 Transmembrane protein 18

2.5e-81

95.71

Show/hide

Query:  MDELRSVMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGLLLIITILTRKRTNFQMFLFLLALAGVYFAERINRILSKNW
        MDELRS MEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGLLLIITI TRKRTNFQMFLFL ALAGVYFAE IN+ILSKNW
Subjt:  MDELRSVMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGLLLIITILTRKRTNFQMFLFLLALAGVYFAERINRILSKNW

Query:  KNFATQNYFDPNGVFLSALWSGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED
        K FATQNYFDPNGVFLSALW GPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED
Subjt:  KNFATQNYFDPNGVFLSALWSGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED

A0A6J1GD63 Transmembrane protein 18

9.6e-81

93.87

Show/hide

Query:  MDELRSVMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGLLLIITILTRKRTNFQMFLFLLALAGVYFAERINRILSKNW
        M+ELRS MEEHMDQM+DL+QKLSSELRSGLRPA+DNFIGFFHAIDWKEPWLMGLLGFHGLLLIITI TRK TNFQMFLFLLALAGVYFAERINRILSKNW
Subjt:  MDELRSVMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGLLLIITILTRKRTNFQMFLFLLALAGVYFAERINRILSKNW

Query:  KNFATQNYFDPNGVFLSALWSGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED
        KNFATQNYFDPNGVFLS LWSGPLLVISMIILINTLFTLCYLVVRWKRAELR+RARLSQ+KED
Subjt:  KNFATQNYFDPNGVFLSALWSGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED

A0A6J1ISM9 Transmembrane protein 18

9.6e-81

93.87

Show/hide

Query:  MDELRSVMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGLLLIITILTRKRTNFQMFLFLLALAGVYFAERINRILSKNW
        M+ELRS MEEHMDQM+DL+QKLSSELRSGLRPA+DNFIGFFHAIDWKEPWLMGLLGFHGLLLIITI TRK TNFQMFLFLLALAGVYFAERINRILSKNW
Subjt:  MDELRSVMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGLLLIITILTRKRTNFQMFLFLLALAGVYFAERINRILSKNW

Query:  KNFATQNYFDPNGVFLSALWSGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED
        KNFATQNYFDPNGVFLS LWSGPLLVISMIILINTLFTLCYLVVRWKRAELR+RARLSQ+KED
Subjt:  KNFATQNYFDPNGVFLSALWSGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED

SwissProt top hits

e value

%identity

Alignment

Q28GF5 Transmembrane protein 18

2.3e-15

39.83

Show/hide

Query:  IDWKEPWLMGLLGFHGLLLIITILTRKRTNFQMFLFLLALAGVYFAERINRILSKNWKNFATQNYFDPNGVFLSALWSGPLLVISMIILINTLF-TLCYL
        IDWKEPWL+GL  FH L LI+T ++ K    Q+  FLL +  V  AE IN   + +W++++ Q YFD +G+F+S  +S PLL  ++II+++ ++ TLC +
Subjt:  IDWKEPWLMGLLGFHGLLLIITILTRKRTNFQMFLFLLALAGVYFAERINRILSKNWKNFATQNYFDPNGVFLSALWSGPLLVISMIILINTLF-TLCYL

Query:  ----VVRWKRAELRHRAR
             ++ KR E R + +
Subjt:  ----VVRWKRAELRHRAR

Q5F410 Transmembrane protein 18

8.0e-16

36.75

Show/hide

Query:  DWKEPWLMGLLGFHGLLLIITILTRKRTNFQMFLFLLALAGVYFAERINRILSKNWKNFATQNYFDPNGVFLSALWSGPLLVISMIILINTLFTLCYLVV
        DW EPWL+GL GFH L  ++T  + +    Q+  FL  +  VY AE IN + + NW+ F+   YFD  G+F+S ++S PLLV ++II++N ++    ++ 
Subjt:  DWKEPWLMGLLGFHGLLLIITILTRKRTNFQMFLFLLALAGVYFAERINRILSKNWKNFATQNYFDPNGVFLSALWSGPLLVISMIILINTLFTLCYLVV

Query:  RWKRAELRHRARLSQSK
          K  + R +A   + K
Subjt:  RWKRAELRHRARLSQSK

Q641M3 Transmembrane protein 18

1.4e-15

35.77

Show/hide

Query:  FFHAIDWKEPWLMGLLGFHGLLLIITILTRKRTNFQMFLFLLALAGVYFAERINRILSKNWKNFATQNYFDPNGVFLSALWSGPLLVISMIILINTLFTL
        F  ++DW EPWLM LL FH      T+L+ K    Q+  FLL +A VY AE +N + + NW++F+   YFD  G+F+S ++S PLL+ ++II+   ++  
Subjt:  FFHAIDWKEPWLMGLLGFHGLLLIITILTRKRTNFQMFLFLLALAGVYFAERINRILSKNWKNFATQNYFDPNGVFLSALWSGPLLVISMIILINTLFTL

Query:  CYLVVRWKRAELRHRARLSQSKE
           +   K  +L+ +A     K+
Subjt:  CYLVVRWKRAELRHRARLSQSKE

Q6DGF8 Transmembrane protein 18

2.7e-16

38.66

Show/hide

Query:  DWKEPWLMGLLGFHGLLLIITILTRKRTNFQMFLFLLALAGVYFAERINRILSKNWKNFATQNYFDPNGVFLSALWSGPLLVISMIILINTLFTLCYLVV
        DW EPWL+GLL FH L L++T  + +R   Q+  FL  +  VY AE IN + + NW+ FA   YFD  G+F+S ++S PLL  +M+I+I  +     ++ 
Subjt:  DWKEPWLMGLLGFHGLLLIITILTRKRTNFQMFLFLLALAGVYFAERINRILSKNWKNFATQNYFDPNGVFLSALWSGPLLVISMIILINTLFTLCYLVV

Query:  RWKRAELRHRARLSQSKED
          K  + R + R  + KE+
Subjt:  RWKRAELRHRARLSQSKED

Q96B42 Transmembrane protein 18

7.2e-17

38.66

Show/hide

Query:  DWKEPWLMGLLGFHGLLLIITILTRKRTNFQMFLFLLALAGVYFAERINRILSKNWKNFATQNYFDPNGVFLSALWSGPLLVISMIILINTLFTLCYLVV
        DW EPWLMGL  FH L +++T L+ +    Q+  FL  +  VY AE IN   + NW+ F+   YFD  G+F+S ++S PLLV +MII++  ++    ++ 
Subjt:  DWKEPWLMGLLGFHGLLLIITILTRKRTNFQMFLFLLALAGVYFAERINRILSKNWKNFATQNYFDPNGVFLSALWSGPLLVISMIILINTLFTLCYLVV

Query:  RWKRAELRHRARLSQSKED
          K A+ R + +  + KED
Subjt:  RWKRAELRHRARLSQSKED

Arabidopsis top hits

e value

%identity

Alignment

AT1G34350.1 unknown protein

1.4e-68

72.39

Show/hide

Query:  MDELRSVMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGLLLIITILTRKRTNFQMFLFLLALAGVYFAERINRILSKNW
        M+E+RS ME+ +D ++DL++KLS ELR+G +PA DNF+GFFHAIDWKEPW+MGL+ FH LLL++T+L+R+  NF MFLFLLALAGVYFAE +NR L KNW
Subjt:  MDELRSVMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGLLLIITILTRKRTNFQMFLFLLALAGVYFAERINRILSKNW

Query:  KNFATQNYFDPNGVFLSALWSGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED
        K+F+TQNYFD NGVFLS LWSGPLLVI+MIILINTLF+LCYL+V+WKRAELRHRARL+ +KE+
Subjt:  KNFATQNYFDPNGVFLSALWSGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED

AT1G34350.2 unknown protein

4.7e-64

62.23

Show/hide

Query:  MDELRSVMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGLLLIITILTRKRTNFQMFLFLLA------------------
        M+E+RS ME+ +D ++DL++KLS ELR+G +PA DNF+GFFHAIDWKEPW+MGL+ FH LLL++T+L+R+  NF MFLFLLA                  
Subjt:  MDELRSVMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGLLLIITILTRKRTNFQMFLFLLA------------------

Query:  -------LAGVYFAERINRILSKNWKNFATQNYFDPNGVFLSALWSGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED
               +AGVYFAE +NR L KNWK+F+TQNYFD NGVFLS LWSGPLLVI+MIILINTLF+LCYL+V+WKRAELRHRARL+ +KE+
Subjt:  -------LAGVYFAERINRILSKNWKNFATQNYFDPNGVFLSALWSGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGATGAGTTGAGATCTGTAATGGAGGAACATATGGACCAAATGTCGGATCTCATTCAAAAACTTTCCTCCGAACTCCGATCCGGTCTCCGTCCCGCTCTTGATAATTT
CATCGGTTTCTTCCACGCCATTGACTGGAAGGAACCTTGGTTGATGGGGTTATTGGGGTTTCATGGATTGTTGCTGATAATAACTATTCTTACCAGGAAGCGTACCAACT
TCCAGATGTTCTTGTTCCTTCTTGCACTGGCTGGTGTATATTTTGCTGAAAGAATCAATAGAATCTTGAGCAAAAACTGGAAGAATTTTGCCACCCAAAACTATTTTGAT
CCAAATGGAGTTTTCCTTTCAGCACTCTGGTCTGGGCCACTGCTTGTAATTTCAATGATAATCCTGATAAACACGCTCTTTACTTTATGCTATCTAGTAGTCAGGTGGAA
AAGAGCTGAGCTTCGACATCGCGCAAGACTGTCACAGAGTAAAGAAGATTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MDELRSVMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGLLLIITILTRKRTNFQMFLFLLALAGVYFAERINRILSKNWKNFATQNYFD
PNGVFLSALWSGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED

Chy11G191090 (gene) of Cucumber (hystrix) v1 genome