| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG6605170.1 RNA polymerase sigma factor sigA, partial [Cucurbita argyrosperma subsp. sororia] | 0.0 | 91.75 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSSSKSVVIAKSSANFSPRYPSSNRHSQQCIKAVKEHVETPSSPIAEPWLHNTTSWED
MMATAAIIGLGAAKRLLNSSSYYSDFTEK+LY ND+RLGQ QVS++KSVVIAK SA+FSP YP SNRH Q CIKAVKEHV+TPSSP AEPWLHNTT WED
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSSSKSVVIAKSSANFSPRYPSSNRHSQQCIKAVKEHVETPSSPIAEPWLHNTTSWED
Query: EETELKYTVEALLLLQKSMLEKQWSLSFEQTVSTDTPREKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
EET+LK TVEALLLLQKSMLEKQW+LSFEQTVSTD PR KT KKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQL+P+ISPELLQNRL+GYVKG
Subjt: EETELKYTVEALLLLQKSMLEKQWSLSFEQTVSTDTPREKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Query: LLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKERLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
L+SEE+L H+EVVRLSKKIKVGL LEE KTRLKERL CEPSE+QLAISL+ISRAELRSR+ME SLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKERLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPS+DRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
AFPSLNGLPGETHHSYIADN LENNPWHGTDTW LK+EVN+LINMTL DREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAK R
Subjt: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Query: KMEAMLLKH
KMEAMLLKH
Subjt: KMEAMLLKH
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| XP_004151855.1 RNA polymerase sigma factor sigA [Cucumis sativus] | 0.0 | 99.21 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSSSKSVVIAKSSANFSPRYPSSNRHSQQCIKAVKEHVETPSSPIAEPWLHNTTSWED
MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSSSKSVVIAKSSANFSPRYPSSNRHSQQCIKAVKEHVETPSSPIAEPW HNTTSWED
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSSSKSVVIAKSSANFSPRYPSSNRHSQQCIKAVKEHVETPSSPIAEPWLHNTTSWED
Query: EETELKYTVEALLLLQKSMLEKQWSLSFEQTVSTDTPREKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
EETELKYTVEALLLLQKSMLEKQWSLSFEQTVSTDTP+EKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Subjt: EETELKYTVEALLLLQKSMLEKQWSLSFEQTVSTDTPREKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Query: LLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKERLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
LLSEELLSHAEVVRLSKKIKVGLTLEERKTRLK+RLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKERLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKV+NATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Subjt: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Query: KMEAMLLKH
KMEAMLLKH
Subjt: KMEAMLLKH
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| XP_016902935.1 PREDICTED: RNA polymerase sigma factor sigA [Cucumis melo] | 0.0 | 96.46 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSSSKSVVIAKSSANFSPRYPSSNRHSQQCIKAVKEHVETPSSPIAEPWLHNTTSWED
MMAT AIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVS +KSVVIAKSSANFSP YP SNRHSQQCIKAVKEHVETPSSP AEPWL NTT WED
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSSSKSVVIAKSSANFSPRYPSSNRHSQQCIKAVKEHVETPSSPIAEPWLHNTTSWED
Query: EETELKYTVEALLLLQKSMLEKQWSLSFEQTVSTDTPREKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
EET+LK TVEALLLLQKSMLEKQW+LSFEQTVSTD PREKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Subjt: EETELKYTVEALLLLQKSMLEKQWSLSFEQTVSTDTPREKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Query: LLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKERLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
LLSEELLSHAEVVRLSKKIKVGL LEE KTRLKERLGCEPSEDQLAISLKISRAELRSRMME SLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKERLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILK EVN+LINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Subjt: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Query: KMEAMLLKH
KMEAML+KH
Subjt: KMEAMLLKH
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| XP_023533104.1 RNA polymerase sigma factor sigA-like [Cucurbita pepo subsp. pepo] | 0.0 | 91.75 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSSSKSVVIAKSSANFSPRYPSSNRHSQQCIKAVKEHVETPSSPIAEPWLHNTTSWED
MMATAAIIGLGAAKRLLNSSSYYSDFTEK+LY ND+RLGQ QVS++KSVVIAK SA+FSP YP SNRH Q CIKAVKEHV+TPSSP AEPWLHNTT WED
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSSSKSVVIAKSSANFSPRYPSSNRHSQQCIKAVKEHVETPSSPIAEPWLHNTTSWED
Query: EETELKYTVEALLLLQKSMLEKQWSLSFEQTVSTDTPREKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
EET+LK TVEALLLLQKSMLEKQW+LSFEQTVSTD PR KT KKVPVTCSGVSARQRRMSSKRKIQSKHVF+AQPKISKQL+P+ISPELLQNRL+GYVKG
Subjt: EETELKYTVEALLLLQKSMLEKQWSLSFEQTVSTDTPREKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Query: LLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKERLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
L+SEE+L H+EVVRLSKKIKVGL LEE KTRLKERL CEPSE+QLAISL+ISRAELRSR+ME SLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKERLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPS+DRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
AFPSLNGLPGETHHSYIADN LENNPWHGTDTWILK+EVN+LINMTL DREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAK R
Subjt: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Query: KMEAMLLKH
KMEAMLLKH
Subjt: KMEAMLLKH
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| XP_038902049.1 RNA polymerase sigma factor sigA [Benincasa hispida] | 0.0 | 95.49 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYAN-DYRLGQTQVSSSKSVVIAKSSANFSPRYPSSNRHSQQCIKAVKEHVETPSSPIAEPWLHNTTSWE
MMATAAIIGLGAAKRLLNSSSYYSDFTEKILY N D+RLGQTQVS +KSVVIAKSSANFSP YPSSNRHSQ CIKAVKEHV+TPSSP AEPWLHNTT WE
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYAN-DYRLGQTQVSSSKSVVIAKSSANFSPRYPSSNRHSQQCIKAVKEHVETPSSPIAEPWLHNTTSWE
Query: DEETELKYTVEALLLLQKSMLEKQWSLSFEQTVSTDTPREKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVK
DEE +LK TVEALLLLQKSMLEKQW+LSFEQTVSTD PR KT KKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVK
Subjt: DEETELKYTVEALLLLQKSMLEKQWSLSFEQTVSTDTPREKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVK
Query: GLLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKERLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGG
GLLSEELLSHAEVVRLSKKIKVGL LEERKTRLKERLGCEPSEDQLAISLKISRAELRSR+ME SLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGG
Subjt: GLLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKERLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGG
Query: LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDR
LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDR
Subjt: LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDR
Query: EAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKT
EAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILK EVN+LINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKT
Subjt: EAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKT
Query: RKMEAMLLKH
RKMEAMLLKH
Subjt: RKMEAMLLKH
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A0A0LQR2 RNA_pol_sigma70 domain-containing protein | 2.9e-277 | 99.21 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSSSKSVVIAKSSANFSPRYPSSNRHSQQCIKAVKEHVETPSSPIAEPWLHNTTSWED
MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSSSKSVVIAKSSANFSPRYPSSNRHSQQCIKAVKEHVETPSSPIAEPW HNTTSWED
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSSSKSVVIAKSSANFSPRYPSSNRHSQQCIKAVKEHVETPSSPIAEPWLHNTTSWED
Query: EETELKYTVEALLLLQKSMLEKQWSLSFEQTVSTDTPREKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
EETELKYTVEALLLLQKSMLEKQWSLSFEQTVSTDTP+EKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Subjt: EETELKYTVEALLLLQKSMLEKQWSLSFEQTVSTDTPREKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Query: LLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKERLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
LLSEELLSHAEVVRLSKKIKVGLTLEERKTRLK+RLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKERLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKV+NATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Subjt: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Query: KMEAMLLKH
KMEAMLLKH
Subjt: KMEAMLLKH
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| A0A1S4E4N5 RNA polymerase sigma factor sigA | 1.0e-269 | 96.46 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSSSKSVVIAKSSANFSPRYPSSNRHSQQCIKAVKEHVETPSSPIAEPWLHNTTSWED
MMAT AIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVS +KSVVIAKSSANFSP YP SNRHSQQCIKAVKEHVETPSSP AEPWL NTT WED
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSSSKSVVIAKSSANFSPRYPSSNRHSQQCIKAVKEHVETPSSPIAEPWLHNTTSWED
Query: EETELKYTVEALLLLQKSMLEKQWSLSFEQTVSTDTPREKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
EET+LK TVEALLLLQKSMLEKQW+LSFEQTVSTD PREKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Subjt: EETELKYTVEALLLLQKSMLEKQWSLSFEQTVSTDTPREKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Query: LLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKERLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
LLSEELLSHAEVVRLSKKIKVGL LEE KTRLKERLGCEPSEDQLAISLKISRAELRSRMME SLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKERLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILK EVN+LINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Subjt: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Query: KMEAMLLKH
KMEAML+KH
Subjt: KMEAMLLKH
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| A0A5D3BME8 RNA polymerase sigma factor sigA | 1.0e-269 | 96.46 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSSSKSVVIAKSSANFSPRYPSSNRHSQQCIKAVKEHVETPSSPIAEPWLHNTTSWED
MMAT AIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVS +KSVVIAKSSANFSP YP SNRHSQQCIKAVKEHVETPSSP AEPWL NTT WED
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSSSKSVVIAKSSANFSPRYPSSNRHSQQCIKAVKEHVETPSSPIAEPWLHNTTSWED
Query: EETELKYTVEALLLLQKSMLEKQWSLSFEQTVSTDTPREKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
EET+LK TVEALLLLQKSMLEKQW+LSFEQTVSTD PREKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Subjt: EETELKYTVEALLLLQKSMLEKQWSLSFEQTVSTDTPREKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Query: LLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKERLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
LLSEELLSHAEVVRLSKKIKVGL LEE KTRLKERLGCEPSEDQLAISLKISRAELRSRMME SLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKERLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILK EVN+LINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Subjt: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Query: KMEAMLLKH
KMEAML+KH
Subjt: KMEAMLLKH
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| A0A6J1D604 RNA polymerase sigma factor sigA | 2.7e-254 | 91.36 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSSSKSVVIAKSSANFSPRYPSSNRHSQQCIKAVKEHVETPSSPIAEPWLHNTTSWED
MMATAAIIGLGAAKRLLNSSSYYSDF EK+LYAND+RLGQ+QVS +KSVVIAKSSANFSP +PSSNRH+ QCIKAVKEHV+TPSSP EPWL N+T WED
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSSSKSVVIAKSSANFSPRYPSSNRHSQQCIKAVKEHVETPSSPIAEPWLHNTTSWED
Query: EETELKYTVEALLLLQKSMLEKQWSLSFEQTVSTDTPREKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
EE +LK TVEALLLLQKSMLEKQW+LSFEQTV TD R +T KKVPVTCSGVSARQRRMSSKRKIQSK+ FM QPKISKQLR TISPELLQ RLKGYVKG
Subjt: EETELKYTVEALLLLQKSMLEKQWSLSFEQTVSTDTPREKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Query: LLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKERLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
L+SEELLSHAEVVRLSKKIKVGL LEERKTRLKERLGCEPSEDQLAISLKISR ELRSR++E SLA+EKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKERLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
AFPSLNGLPGETHHSYIADN LEN+PWHGTDTWILK EVN+LINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Subjt: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Query: KMEAMLLKH
KMEAMLLKH
Subjt: KMEAMLLKH
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| A0A6J1KWY7 RNA polymerase sigma factor sigA-like | 9.1e-255 | 91.36 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSSSKSVVIAKSSANFSPRYPSSNRHSQQCIKAVKEHVETPSSPIAEPWLHNTTSWED
MMATAAIIGLGAAKRLLNSSSYYSDFTEK+LY ND+RLGQ QVS++K VVIAK SA+FSP Y SNRH QCIKAVKEHV+TPSSP AEPWLHNTT WED
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSSSKSVVIAKSSANFSPRYPSSNRHSQQCIKAVKEHVETPSSPIAEPWLHNTTSWED
Query: EETELKYTVEALLLLQKSMLEKQWSLSFEQTVSTDTPREKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
EET+LK TVEALLLLQKSMLEKQW+LSFEQTVSTD PR KT KKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQL+P ISPELLQNRL+GYVKG
Subjt: EETELKYTVEALLLLQKSMLEKQWSLSFEQTVSTDTPREKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Query: LLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKERLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
L+SEE+L H+EVVRLSKKIKVGL LEE KTRLKERL C+PSE+QLAISL+ISRAELRSR+ME SLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKERLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPS+DRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
AFPSLNGLPGETHHSYIADN LENNPWHGTDTWILK+EVN+LINMTL DREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAK R
Subjt: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Query: KMEAMLLKH
KMEAMLLKH
Subjt: KMEAMLLKH
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| O24629 RNA polymerase sigma factor sigA | 4.2e-188 | 68.47 | Show/hide |
Query: MATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSSSKSVVIAKSSANFSPRYPSSNRHSQQCIKAVKEHVETPSSPIAEPWLHNTTSWE--
MATAA+IGL KRLL+SS Y+SD TEK L ND+ Q ++S+KS + AK ++N+SP +PSSNRH+Q KA+KE V+ S+ +PWL N T E
Subjt: MATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSSSKSVVIAKSSANFSPRYPSSNRHSQQCIKAVKEHVETPSSPIAEPWLHNTTSWE--
Query: ----DEETELKYTVEALLLLQKSMLEKQWSLSFEQTVSTDTPREKTL--KKVPV-TCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQN
D++ + ++VEA+LLLQKSMLEK W+LSFE+ VS++ P + T+ KK+PV TCSG+SARQRR+ +K+K HV +S
Subjt: ----DEETELKYTVEALLLLQKSMLEKQWSLSFEQTVSTDTPREKTL--KKVPV-TCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQN
Query: RLKGYVKGLLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKERLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEM
+++GYVKG++SE++LSH EVVRLSKKIK GL L++ K+RLK+RLGCEPS++QLA+SLKISRAEL++ +ME LAREKLAMSNVRLVMSIAQRYDN+GAEM
Subjt: RLKGYVKGLLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKERLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEM
Query: ADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAIS
+DLVQGGLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALV+NSRTLRLPTHLHERLGLIRNAK++LQEKGITPS+DRIAESLNMS+KKV+NATEA+S
Subjt: ADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAIS
Query: KVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEK
KVFSLDR+AFPSLNGLPGETHHSYIAD LENNPWHG D LK EV++LI+ TLG+RE+EIIRLY+GLD ECLTWE+ISKRIGLSRERVRQVGLVALEK
Subjt: KVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEK
Query: LKKAAKTRKMEAMLLKH
LK AA+ RKMEAM+LK+
Subjt: LKKAAKTRKMEAMLLKH
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| P26683 RNA polymerase sigma factor SigA | 1.4e-39 | 33.94 | Show/hide |
Query: KISKQLRPTISPE--LLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKERLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMS
K +K R T S + ++ ++ Y++ + LL E + L++KI L LE + RL E+L +P + + A ++++ R R+ A++K+ S
Subjt: KISKQLRPTISPE--LLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKERLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMS
Query: NVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI-RNAKVKLQEKGITPSLDR
N+RLV+SIA++Y N G DL+Q G +GL+R EKFD KG+K STY WWIRQ ++RA+ + SRT+RLP HL+E + I + K+ QE G P+ +
Subjt: NVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI-RNAKVKLQEKGITPSLDR
Query: IAESLNMSKKKV----KNATEAISKVFSLDREAFPSLNGL---PGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDN-E
IA + M+ +K+ K+A IS + +E L GET ++ N +L+ ++ ++++ +L RER+++RL +GLD+
Subjt: IAESLNMSKKKV----KNATEAISKVFSLDREAFPSLNGL---PGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDN-E
Query: CLTWEEISKRIGLSRERVRQVGLVALEKLK
T EEI + ++RER+RQ+ AL KL+
Subjt: CLTWEEISKRIGLSRERVRQVGLVALEKLK
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| P38023 RNA polymerase sigma factor SigA1 | 2.5e-39 | 34.14 | Show/hide |
Query: AQPKISKQLRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKERLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAM
A K ++R T + ++ ++ Y++ + LL E + L+++I L LE + L E+L PS+ + A ++ E R R+ A++K+
Subjt: AQPKISKQLRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKERLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAM
Query: SNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI-RNAKVKLQEKGITPSLD
SN+RLV+SIA++Y N G DL+Q G +GL+R EKFD KG+K STY WWIRQ ++RA+ + SRT+RLP HL+E + I + K+ QE G P+ +
Subjt: SNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI-RNAKVKLQEKGITPSLD
Query: RIAESLNMSKKKV----KNATEAISKVFSLDREAFPSLNGL---PGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDN-
IA + M+ +K+ K+A IS + +E L GET +A N +L+ ++ +++ TL RER+++RL +GLD+
Subjt: RIAESLNMSKKKV----KNATEAISKVFSLDREAFPSLNGL---PGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDN-
Query: ECLTWEEISKRIGLSRERVRQVGLVALEKLK
T EEI + ++RER+RQ+ AL KL+
Subjt: ECLTWEEISKRIGLSRERVRQVGLVALEKLK
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| Q03065 RNA polymerase sigma-B factor | 9.4e-39 | 33.11 | Show/hide |
Query: LLSHAEVVRLSKKIKVGLTLEERKTRLKERLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLR
LLSH + + +++++ + + K L E+L EP+ + A +++ L ++ + +A++K+ +N+RLV+SIA++Y E DL+Q G +GL R
Subjt: LLSHAEVVRLSKKIKVGLTLEERKTRLKERLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLR
Query: GIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEK-GITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPS
G+EKFD + G+K STY YWWIRQG++RA+ + SRT+RLP H+ ++L I+ + +L +K G + IA++LN+ +++ + + + SLD
Subjt: GIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEK-GITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPS
Query: LNGLPGETH-HSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNEC-LTWEEISKRIGLSRERVRQVGLVALEKLKK
G +T + D+ + +P + +L +++ L+ L +++E++ L GL C LT +IS+R+G+SRERVRQV AL L++
Subjt: LNGLPGETH-HSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNEC-LTWEEISKRIGLSRERVRQVGLVALEKLKK
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| Q0J7T6 RNA polymerase sigma factor sigA | 8.8e-130 | 51.52 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSD-FTEKILY--------ANDYRLGQTQVSSSKSVVIAKSSANFSPRYPSSNRHSQQCIKAVKEHVE-----TPSSP
M AT A+IGL A RLL++S +D +K+ G + + K +A + R S Q ++A++ H P P
Subjt: MMATAAIIGLGAAKRLLNSSSYYSD-FTEKILY--------ANDYRLGQTQVSSSKSVVIAKSSANFSPRYPSSNRHSQQCIKAVKEHVE-----TPSSP
Query: IAEPWLHNTTSWEDEETELKYTVEALLLLQKSMLEKQWSLSFE-----QTVSTDTPREKTLK-KVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQ
P + S +L+ ++EA++LLQ+SMLEKQW L F+ + + T K V V S VSARQRRMS +R+ ++K +
Subjt: IAEPWLHNTTSWEDEETELKYTVEALLLLQKSMLEKQWSLSFE-----QTVSTDTPREKTLK-KVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQ
Query: LRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKERLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMS
+SPEL+Q+R + Y++G +S+ELL+H +VV LS KIK G+ L++++++LKE+LG EPS QLA SLKIS ELRSRM ES LARE L MSN+RLV+S
Subjt: LRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKERLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMS
Query: IAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMS
IAQ+YDN+G E+ADL+QGGLIGLLRGIEKFD+S+GF+ISTYVYWWIRQGVSRAL ENS+T RLPT+LHERL IR AK +L+++GI P+++ IA SLN+S
Subjt: IAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMS
Query: KKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRE
+KKV NATEA++KV SLD++AFPSLNGLPGET HSYI D + N+PWHG + W LK EVN+L+N TL +RER+IIRLYHG+ +C TWE+IS++ GLSRE
Subjt: KKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRE
Query: RVRQVGLVALEKLKKAAKTRKMEAML
RVRQVGL+A+EKLK AA+ + +EA+L
Subjt: RVRQVGLVALEKLKKAAKTRKMEAML
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G08540.1 RNApolymerase sigma subunit 2 | 1.5e-39 | 32.86 | Show/hide |
Query: NTTSWEDEETELKYTVEALLLLQKSMLEKQWSLSFEQTVSTDTPRE-KTLKKVPVTCSGV-SARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQ
N S D E+E + VE +LE+Q S+S + T R+ + K + T SG+ S + K+++ ++ V P + LR T S
Subjt: NTTSWEDEETELKYTVEALLLLQKSMLEKQWSLSFEQTVSTDTPRE-KTLKKVPVTCSGV-SARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQ
Query: NRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKERLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAE
S +LL+ E LS I+ L LE +T L ER G +P+ Q A + + + LR R+ +L ++K+ SN+RLV+SIA+ Y G
Subjt: NRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKERLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAE
Query: MADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKL-QEKGITPSLDRIAESLNMSKKKVKNATEA
+ DLVQ G GL+RG EKFD++KGFK STY +WWI+Q V ++L + SR +RLP H+ E ++ A+ +L E G P + IAE+ +S K++ +
Subjt: MADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKL-QEKGITPSLDRIAESLNMSKKKVKNATEA
Query: ISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWIL-----KVEVNQLINMTLGDREREIIRLYHGL-DNECLTWEEISKRIGLSRERVRQ
SLD++ + N P E IAD P T IL + +++++++ +LG RE+++IR G+ D T +EI + +G+SRERVRQ
Subjt: ISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWIL-----KVEVNQLINMTLGDREREIIRLYHGL-DNECLTWEEISKRIGLSRERVRQ
Query: VGLVALEKLKKAAKTRKMEAMLL
+ A KLK + ++ L+
Subjt: VGLVALEKLKKAAKTRKMEAMLL
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| AT1G64860.1 sigma factor A | 3.0e-189 | 68.47 | Show/hide |
Query: MATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSSSKSVVIAKSSANFSPRYPSSNRHSQQCIKAVKEHVETPSSPIAEPWLHNTTSWE--
MATAA+IGL KRLL+SS Y+SD TEK L ND+ Q ++S+KS + AK ++N+SP +PSSNRH+Q KA+KE V+ S+ +PWL N T E
Subjt: MATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSSSKSVVIAKSSANFSPRYPSSNRHSQQCIKAVKEHVETPSSPIAEPWLHNTTSWE--
Query: ----DEETELKYTVEALLLLQKSMLEKQWSLSFEQTVSTDTPREKTL--KKVPV-TCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQN
D++ + ++VEA+LLLQKSMLEK W+LSFE+ VS++ P + T+ KK+PV TCSG+SARQRR+ +K+K HV +S
Subjt: ----DEETELKYTVEALLLLQKSMLEKQWSLSFEQTVSTDTPREKTL--KKVPV-TCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQN
Query: RLKGYVKGLLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKERLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEM
+++GYVKG++SE++LSH EVVRLSKKIK GL L++ K+RLK+RLGCEPS++QLA+SLKISRAEL++ +ME LAREKLAMSNVRLVMSIAQRYDN+GAEM
Subjt: RLKGYVKGLLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKERLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEM
Query: ADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAIS
+DLVQGGLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALV+NSRTLRLPTHLHERLGLIRNAK++LQEKGITPS+DRIAESLNMS+KKV+NATEA+S
Subjt: ADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAIS
Query: KVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEK
KVFSLDR+AFPSLNGLPGETHHSYIAD LENNPWHG D LK EV++LI+ TLG+RE+EIIRLY+GLD ECLTWE+ISKRIGLSRERVRQVGLVALEK
Subjt: KVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEK
Query: LKKAAKTRKMEAMLLKH
LK AA+ RKMEAM+LK+
Subjt: LKKAAKTRKMEAMLLKH
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| AT1G64860.2 sigma factor A | 2.7e-174 | 67.29 | Show/hide |
Query: MATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSSSKSVVIAKSSANFSPRYPSSNRHSQQCIKAVKEHVETPSSPIAEPWLHNTTSWE--
MATAA+IGL KRLL+SS Y+SD TEK L ND+ Q ++S+KS + AK ++N+SP +PSSNRH+Q KA+KE V+ S+ +PWL N T E
Subjt: MATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSSSKSVVIAKSSANFSPRYPSSNRHSQQCIKAVKEHVETPSSPIAEPWLHNTTSWE--
Query: ----DEETELKYTVEALLLLQKSMLEKQWSLSFEQTVSTDTPREKTL--KKVPV-TCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQN
D++ + ++VEA+LLLQKSMLEK W+LSFE+ VS++ P + T+ KK+PV TCSG+SARQRR+ +K+K HV +S
Subjt: ----DEETELKYTVEALLLLQKSMLEKQWSLSFEQTVSTDTPREKTL--KKVPV-TCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQN
Query: RLKGYVKGLLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKERLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEM
+++GYVKG++SE++LSH EVVRLSKKIK GL L++ K+RLK+RLGCEPS++QLA+SLKISRAEL++ +ME LAREKLAMSNVRLVMSIAQRYDN+GAEM
Subjt: RLKGYVKGLLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKERLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEM
Query: ADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAIS
+DLVQGGLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALV+NSRTLRLPTHLHERLGLIRNAK++LQEKGITPS+DRIAESLNMS+KKV+NATEA+S
Subjt: ADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAIS
Query: KVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNECLTWEEISKRI
KVFSLDR+AFPSLNGLPGETHHSYIAD LENNPWHG D LK EV++LI+ TLG+RE+EIIRLY+GLD ECLTWE+ISKRI
Subjt: KVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNECLTWEEISKRI
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| AT2G36990.1 RNApolymerase sigma-subunit F | 2.6e-36 | 32.59 | Show/hide |
Query: LKGYVKGLLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKERLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEMA
L+ ++ G +++LL+ E L I+ L LE+ KT+L+ + GCEP+ + A ++ IS L+S + +REKL +N+RLV+ IA++Y N G
Subjt: LKGYVKGLLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKERLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEMA
Query: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNA-KVKLQEKGITPSLDRIAESLNMSKKKVKNATEAIS
DL+Q G +GL++ +EKF G + +TY YWWIRQ + +++ +NSRT+RLP +++ LG + A K +QE PS + +A + +S +K+
Subjt: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNA-KVKLQEKGITPSLDRIAESLNMSKKKVKNATEAIS
Query: KVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLD-NECLTWEEISKRIGLSRERVRQVGLVALE
S+ + + + T D+ +E P +++ V L+N+ L +ER II+L G+D + + EI + GLS+ERVRQ+ AL
Subjt: KVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLD-NECLTWEEISKRIGLSRERVRQVGLVALE
Query: KLKKAAKTRKMEA
+LK+ + + A
Subjt: KLKKAAKTRKMEA
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| AT5G13730.1 sigma factor 4 | 1.4e-34 | 33.63 | Show/hide |
Query: SSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKERLGCEPSEDQLAISLKISRAELRSR
S KR+ + + + ++ + E + V G LS E V+L +K G L E LG E+++ L S + R
Subjt: SSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKERLGCEPSEDQLAISLKISRAELRSR
Query: MMESSL-----AREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI
L AREK+ RLV+SIA Y G + DL+Q G IGLLRG E+FD +G+K+STYVYWWI+Q + RA+ SR ++LP + E +
Subjt: MMESSL-----AREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI
Query: RNAKVKLQEK-GITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDRERE
A L K PS + IAE LN++ V+ A E SLDR A + G I E P +K E+ QL+ +L RE
Subjt: RNAKVKLQEK-GITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDRERE
Query: IIRLYHGLDNEC-LTWEEISKRIGLSRERVRQVGLVALEKLK
++ LY GL+ E +++EEI K + LSRERVRQ+ +AL+KL+
Subjt: IIRLYHGLDNEC-LTWEEISKRIGLSRERVRQVGLVALEKLK
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