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Chy11G191160 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy11G191160
OrganismCucumis hystrix (Cucumber (hystrix) v1)
Descriptionfarnesyl diphosphate synthase 2
Genome locationchrH11:5914485..5915201
RNA-Seq ExpressionChy11G191160
SyntenyChy11G191160
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039151.1 farnesyl pyrophosphate synthase 1 [Cucumis melo var. makuwa]1.48e-0592.59Show/hide
Query:  FQLEVACALVMAGEDLEKHTAVKDILV
        F L VACALVMAGEDLEKHTAVKDILV
Subjt:  FQLEVACALVMAGEDLEKHTAVKDILV
KAE8648192.1 hypothetical protein Csa_018386 [Cucumis sativus]3.15e-0591.67Show/hide
Query:  EVACALVMAGEDLEKHTAVKDILV
        +VACALVMAGEDLEKHTAVKDIL+
Subjt:  EVACALVMAGEDLEKHTAVKDILV
XP_008463060.1 PREDICTED: farnesyl pyrophosphate synthase 1 [Cucumis melo]1.47e-0592.59Show/hide
Query:  FQLEVACALVMAGEDLEKHTAVKDILV
        F L VACALVMAGEDLEKHTAVKDILV
Subjt:  FQLEVACALVMAGEDLEKHTAVKDILV
XP_022142632.1 farnesyl pyrophosphate synthase 1 [Momordica charantia]1.82e-0481.48Show/hide
Query:  FQLEVACALVMAGEDLEKHTAVKDILV
        F L VACALVM+GEDLEKHT VKD+LV
Subjt:  FQLEVACALVMAGEDLEKHTAVKDILV
XP_038893588.1 farnesyl pyrophosphate synthase 1 [Benincasa hispida]1.33e-0485.19Show/hide
Query:  FQLEVACALVMAGEDLEKHTAVKDILV
        F L VACALVM+GEDLEKHT VKDILV
Subjt:  FQLEVACALVMAGEDLEKHTAVKDILV
TrEMBL top hitse value%identityAlignment
A0A0A0KPI3 Uncharacterized protein7.1e-2092.59Show/hide
Query:  MVLIPHSKGFSFHWQMLHLLDEIEIRDFQLEVACALVMAGEDLEKHTAVKDILV
        MVLIPHSKGFSFHWQ+LHLLDEIEI DFQ EVACALVMAGEDLEKHTAVKDIL+
Subjt:  MVLIPHSKGFSFHWQMLHLLDEIEIRDFQLEVACALVMAGEDLEKHTAVKDILV
SwissProt top hitse value%identityAlignment
Q4JHN6 Farnesyl pyrophosphate synthase1.4e-0477.78Show/hide
Query:  FQLEVACALVMAGEDLEKHTAVKDILV
        F L VACAL+M+GEDLEKHT VKDIL+
Subjt:  FQLEVACALVMAGEDLEKHTAVKDILV
Arabidopsis top hitse value%identityAlignment
AT4G17190.1 farnesyl diphosphate synthase 24.1e-0470.37Show/hide
Query:  FQLEVACALVMAGEDLEKHTAVKDILV
        F L VACAL+MAGE+LE HT VK +LV
Subjt:  FQLEVACALVMAGEDLEKHTAVKDILV
AT4G17190.2 farnesyl diphosphate synthase 24.1e-0470.37Show/hide
Query:  FQLEVACALVMAGEDLEKHTAVKDILV
        F L VACAL+MAGE+LE HT VK +LV
Subjt:  FQLEVACALVMAGEDLEKHTAVKDILV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTTAATCCCTCACAGCAAAGGCTTCTCTTTCCATTGGCAAATGCTCCATTTGCTAGATGAAATTGAAATTAGAGATTTTCAACTAGAGGTGGCTTGTGCACTGGT
TATGGCAGGTGAAGATCTTGAGAAACATACTGCAGTTAAGGACATTCTTGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTTAATCCCTCACAGCAAAGGCTTCTCTTTCCATTGGCAAATGCTCCATTTGCTAGATGAAATTGAAATTAGAGATTTTCAACTAGAGGTGGCTTGTGCACTGGT
TATGGCAGGTGAAGATCTTGAGAAACATACTGCAGTTAAGGACATTCTTGTTTAA
Protein sequenceShow/hide protein sequence
MVLIPHSKGFSFHWQMLHLLDEIEIRDFQLEVACALVMAGEDLEKHTAVKDILV