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Chy11G191590 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy11G191590
OrganismCucumis hystrix (Cucumber (hystrix) v1)
Descriptionprotein LAX PANICLE 2-like
Genome locationchrH11:6622743..6627985
RNA-Seq ExpressionChy11G191590
SyntenyChy11G191590
Gene Ontology termsGO:0006289 - nucleotide-excision repair (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0007275 - multicellular organism development (biological process)
GO:0016310 - phosphorylation (biological process)
GO:0000439 - transcription factor TFIIH core complex (cellular component)
GO:0016301 - kinase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR044171 - Protein LAX PANICLE 2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652308.1 hypothetical protein Csa_022227 [Cucumis sativus]2.01e-9290.91Show/hide
Query:  MGSSSTQEWLELSLGLRSTEKKQLQKQEKEDEKRSRLYQEKLVVCGTTSHKESEYVNLDLRLQTGPNNKSNYYYMGIRDFMLQHQSKKKHFHSDYSSIIT
        MGSSSTQEWLELSLGL ST K+QLQKQEKEDEKRSRLYQEKLV+CGTTSH+ESEYVNLDLRLQ GPNNKSNY  MGIRDFMLQHQSKKKHFHSDYSSIIT
Subjt:  MGSSSTQEWLELSLGLRSTEKKQLQKQEKEDEKRSRLYQEKLVVCGTTSHKESEYVNLDLRLQTGPNNKSNYYYMGIRDFMLQHQSKKKHFHSDYSSIIT

Query:  NSAGLWFSLLSSPNRKGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEIITVTYFLN
        NSAGLWFSLLSSPNRKGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAE+      LN
Subjt:  NSAGLWFSLLSSPNRKGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEIITVTYFLN

KAG6571319.1 Protein LAX PANICLE 2, partial [Cucurbita argyrosperma subsp. sororia]5.15e-3653.22Show/hide
Query:  MGSSSTQEWLELSLGLRSTEKKQLQKQEKEDEKRSRLYQEKLVVCGTTSHKESEYVNLDLRLQTGPNNKSNYYY---MGIRDFMLQHQSKK---------
        MGS  ++EWLELSLGLR T+KKQ + +++EDE                  +E E  +L LRLQ GP      Y+   MGI  FM    ++K         
Subjt:  MGSSSTQEWLELSLGLRSTEKKQLQKQEKEDEKRSRLYQEKLVVCGTTSHKESEYVNLDLRLQTGPNNKSNYYY---MGIRDFMLQHQSKK---------

Query:  --KHFHSDYSSIITNSAGLWFSLLSSPNRKGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEI
           HFH   S    N AGLWFSL SSPNRKGGA LPQIPK YIRVKDEKMTVLMVKKYLLTKLGLS+QAE+
Subjt:  --KHFHSDYSSIITNSAGLWFSLLSSPNRKGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEI

XP_017971271.1 PREDICTED: uncharacterized protein LOC18612903 isoform X3 [Theobroma cacao]1.59e-1564.06Show/hide
Query:  DYSSIITNSAGLWFSLLSSPNRKGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEI
        DY +     +GLWF+L S  NR+ G ALPQIPK YIRVKDE +T+ MVKKYL+TKLGLSN+AE+
Subjt:  DYSSIITNSAGLWFSLLSSPNRKGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEI

XP_020965814.1 uncharacterized protein LOC110266143 isoform X2 [Arachis ipaensis]1.98e-1567.16Show/hide
Query:  DYSSIITNSAGLWFSLLSSPNRKGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEIITV
        D  S   N  GLWF+L SS NR+G  ALPQIPK YIR++DE MTV MVKKYL+TKLGLSN+AEI T+
Subjt:  DYSSIITNSAGLWFSLLSSPNRKGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEIITV

XP_022931988.1 protein LAX PANICLE 2-like [Cucurbita moschata]7.25e-3654.17Show/hide
Query:  MGSSSTQEWLELSLGLRSTEKKQLQKQEKEDEKRSRLYQEKLVVCGTTSHKESEYVNLDLRLQTGPNNKSNYYYMGIRDFMLQHQSKK-----------K
        MGS  ++EWLELSLGLR T+KKQ + +++EDE                  +E E  +L LRLQ GP  K     MGI  FM    ++K            
Subjt:  MGSSSTQEWLELSLGLRSTEKKQLQKQEKEDEKRSRLYQEKLVVCGTTSHKESEYVNLDLRLQTGPNNKSNYYYMGIRDFMLQHQSKK-----------K

Query:  HFHSDYSSIITNSAGLWFSLLSSPNRKGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEI
        HFH   S    N AGLWFSL SSPNRKGGA LPQIPK YIRVKDEKMTVLMVKKYLLTKLGLS+QAE+
Subjt:  HFHSDYSSIITNSAGLWFSLLSSPNRKGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEI

TrEMBL top hitse value%identityAlignment
A0A0A0LR47 Uncharacterized protein2.4e-5093.04Show/hide
Query:  MGSSSTQEWLELSLGLRSTEKKQLQKQEKEDEKRSRLYQEKLVVCGTTSHKESEYVNLDLRLQTGPNNKSNYYYMGIRDFMLQHQSKKKHFHSDYSSIIT
        MGSSSTQEWLELSLGL ST K+QLQKQEKEDEKRSRLYQEKLV+CGTTSH+ESEYVNLDLRLQ GPNNKSNY  MGIRDFMLQHQSKKKHFHSDYSSIIT
Subjt:  MGSSSTQEWLELSLGLRSTEKKQLQKQEKEDEKRSRLYQEKLVVCGTTSHKESEYVNLDLRLQTGPNNKSNYYYMGIRDFMLQHQSKKKHFHSDYSSIIT

Query:  NSAGLWFSLLSSPNR
        NSAGLWFSLLSSPNR
Subjt:  NSAGLWFSLLSSPNR

A0A2I4DPI0 uncharacterized protein LOC1089822023.3e-1278.18Show/hide
Query:  AGLWFSLLSSPNRKGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEI
        +GLWFSL SS NR  G ALPQIPK YIRVKDE +TV MVKKYL+TKLGLSN+AEI
Subjt:  AGLWFSLLSSPNRKGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEI

A0A6J1F0B3 protein LAX PANICLE 2-like1.8e-2954.17Show/hide
Query:  MGSSSTQEWLELSLGLRSTEKKQLQKQEKEDEKRSRLYQEKLVVCGTTSHKESEYVNLDLRLQTGPNNKSNYYYMGIRDFMLQHQSKK-----------K
        MGS  ++EWLELSLGLR T+KKQ + +++EDE                  +E E  +L LRLQ GP  K     MGI  FM    ++K            
Subjt:  MGSSSTQEWLELSLGLRSTEKKQLQKQEKEDEKRSRLYQEKLVVCGTTSHKESEYVNLDLRLQTGPNNKSNYYYMGIRDFMLQHQSKK-----------K

Query:  HFHSDYSSIITNSAGLWFSLLSSPNRKGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEI
        HFH   S    N AGLWFSL SSPNRKGGA LPQIPK YIRVKDEKMTVLMVKKYLLTKLGLS+QAE+
Subjt:  HFHSDYSSIITNSAGLWFSLLSSPNRKGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEI

A0A6P5MK19 uncharacterized protein LOC110274740 isoform X22.5e-1270Show/hide
Query:  NSAGLWFSLLSSPNRKGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEIITV
        N  GLWF+L SS NR+ G ALPQIPK YIR++DE MTV MVKKYL+ KLGLSN+AEI T+
Subjt:  NSAGLWFSLLSSPNRKGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEIITV

A0A7J7C0I8 General transcription factor IIH subunit 3 isoform X22.5e-1270.49Show/hide
Query:  SIITNSAGLWFSLLSSPNRKGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEI
        SII  ++G WF+L SS NR+ G  LPQIPK YIRVKDE +++LMVKKYL+TKLGLSNQAEI
Subjt:  SIITNSAGLWFSLLSSPNRKGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEI

SwissProt top hitse value%identityAlignment
G3XKQ9 Protein LAX PANICLE 28.1e-0842.62Show/hide
Query:  SIITNSAGLWFSLLSSPNRKGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEI
        S +  +AG+WF L ++P +     LPQIP+ Y+R+KD ++TV ++ KYL+ KLGL +++E+
Subjt:  SIITNSAGLWFSLLSSPNRKGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEI

Q94AY3 E3 ubiquitin protein ligase DRIP23.1e-0738.55Show/hide
Query:  LWFSLLSSPNRKGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEI-IT---------------VTYFLNSSSKHQ
        +WFSL++S N++G A+LPQIP  Y+R++D  + V  ++KYL+ KL L ++ E+ IT               V  +L ++SKHQ
Subjt:  LWFSLLSSPNRKGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEI-IT---------------VTYFLNSSSKHQ

Q9LS86 Probable E3 ubiquitin protein ligase DRIPH5.5e-0443.86Show/hide
Query:  NSAGLWFSLLSSPNRKGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEI
        N+  +WFSL  S  +     LP I    IRVKD  MTV  +KKYL+ KLGL ++ ++
Subjt:  NSAGLWFSLLSSPNRKGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEI

Q9M9Y4 E3 ubiquitin protein ligase DRIP15.3e-0745.28Show/hide
Query:  LWFSLLSSPNRKGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEI
        +WFSL++S +++GG +LPQIP  ++R++D   TV  ++KYL+ KL L ++ EI
Subjt:  LWFSLLSSPNRKGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEI

Arabidopsis top hitse value%identityAlignment
AT1G06770.1 DREB2A-interacting protein 13.8e-0845.28Show/hide
Query:  LWFSLLSSPNRKGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEI
        +WFSL++S +++GG +LPQIP  ++R++D   TV  ++KYL+ KL L ++ EI
Subjt:  LWFSLLSSPNRKGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEI

AT1G06770.2 DREB2A-interacting protein 13.8e-0845.28Show/hide
Query:  LWFSLLSSPNRKGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEI
        +WFSL++S +++GG +LPQIP  ++R++D   TV  ++KYL+ KL L ++ EI
Subjt:  LWFSLLSSPNRKGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEI

AT1G28080.1 RING finger protein3.5e-0641.82Show/hide
Query:  AGLWFSLLSSPNRKGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEI
        +GLWF L +S  ++    LPQ+ K Y+R+KD ++TV ++ KYL+ KL L +++E+
Subjt:  AGLWFSLLSSPNRKGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEI

AT2G30580.1 DREB2A-interacting protein 22.2e-0838.55Show/hide
Query:  LWFSLLSSPNRKGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEI-IT---------------VTYFLNSSSKHQ
        +WFSL++S N++G A+LPQIP  Y+R++D  + V  ++KYL+ KL L ++ E+ IT               V  +L ++SKHQ
Subjt:  LWFSLLSSPNRKGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEI-IT---------------VTYFLNSSSKHQ

AT5G13250.1 RING finger protein2.9e-0844.83Show/hide
Query:  AGLWFSLLSSPNRKGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEIITV
        +G+WF L +S N+     LPQIPK Y+R+KD KMTV ++ KYL+ KL L ++++ + +
Subjt:  AGLWFSLLSSPNRKGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEIITV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTCCTCTTCTACTCAAGAGTGGCTAGAGTTGAGTTTAGGATTAAGATCCACAGAGAAGAAACAACTACAAAAACAAGAAAAAGAAGATGAAAAAAGATCGAGACT
CTACCAAGAGAAATTAGTTGTTTGTGGAACCACTTCTCATAAGGAAAGTGAGTATGTTAATTTGGATTTGAGGCTTCAAACAGGGCCTAATAATAAAAGTAATTATTACT
ATATGGGAATAAGGGATTTTATGCTTCAACATCAAAGCAAGAAAAAGCACTTCCATAGTGATTATTCTTCAATAATCACCAACTCTGCTGGTTTGTGGTTTTCACTACTC
TCTTCACCCAACAGGAAGGGAGGAGCAGCACTGCCTCAGATACCCAAACCCTACATTAGAGTCAAGGATGAGAAGATGACAGTGTTGATGGTGAAGAAGTACCTGCTCAC
AAAGCTGGGTCTCTCCAATCAAGCTGAGATTATTACTGTCACATATTTCCTAAATTCTTCAAGCAAGCATCAAAATCAACCTTGAGTCCACGCAAGGAAGTAAAATCAGA
TGGACAACAAACTCCTATTTCACAAGATCATAATCAGGTAGTATGTCAAATTTGTGACAAAGCTAACCATGTGGCTATTGATTCTTGGAATAGGTACAATCACTCTTATC
AGTCTAATGATATACCAAAGGCTTTTGCTGTTATGAATTTGATGGAGGAACCCAACTCCACCATCTATGCAGATTCAGAAGCCTTGGCACATATCATAACCAATACTGGT
AATTTGAGTAACTTGCAAACCTATTTAGGTAAAGATAAAGTATATATATTGGAAATGGTAAAAGTCTTCAAATTACACACATTG
mRNA sequenceShow/hide mRNA sequence
ATGGGTTCCTCTTCTACTCAAGAGTGGCTAGAGTTGAGTTTAGGATTAAGATCCACAGAGAAGAAACAACTACAAAAACAAGAAAAAGAAGATGAAAAAAGATCGAGACT
CTACCAAGAGAAATTAGTTGTTTGTGGAACCACTTCTCATAAGGAAAGTGAGTATGTTAATTTGGATTTGAGGCTTCAAACAGGGCCTAATAATAAAAGTAATTATTACT
ATATGGGAATAAGGGATTTTATGCTTCAACATCAAAGCAAGAAAAAGCACTTCCATAGTGATTATTCTTCAATAATCACCAACTCTGCTGGTTTGTGGTTTTCACTACTC
TCTTCACCCAACAGGAAGGGAGGAGCAGCACTGCCTCAGATACCCAAACCCTACATTAGAGTCAAGGATGAGAAGATGACAGTGTTGATGGTGAAGAAGTACCTGCTCAC
AAAGCTGGGTCTCTCCAATCAAGCTGAGATTATTACTGTCACATATTTCCTAAATTCTTCAAGCAAGCATCAAAATCAACCTTGAGTCCACGCAAGGAAGTAAAATCAGA
TGGACAACAAACTCCTATTTCACAAGATCATAATCAGGTAGTATGTCAAATTTGTGACAAAGCTAACCATGTGGCTATTGATTCTTGGAATAGGTACAATCACTCTTATC
AGTCTAATGATATACCAAAGGCTTTTGCTGTTATGAATTTGATGGAGGAACCCAACTCCACCATCTATGCAGATTCAGAAGCCTTGGCACATATCATAACCAATACTGGT
AATTTGAGTAACTTGCAAACCTATTTAGGTAAAGATAAAGTATATATATTGGAAATGGTAAAAGTCTTCAAATTACACACATTG
Protein sequenceShow/hide protein sequence
MGSSSTQEWLELSLGLRSTEKKQLQKQEKEDEKRSRLYQEKLVVCGTTSHKESEYVNLDLRLQTGPNNKSNYYYMGIRDFMLQHQSKKKHFHSDYSSIITNSAGLWFSLL
SSPNRKGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEIITVTYFLNSSSKHQNQPVHARKNQMDNKLLFHKIIIR*YVKFVTKLTMWLLILGIGTITLISL
MIYQRLLLL*I*WRNPTPPSMQIQKPWHISPILVI*VTCKPI*VKIKYIYWKW*KSSNYTHX