; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy11G191920 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy11G191920
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionSodium Bile acid symporter family
Genome locationchrH11:7175625..7177639
RNA-Seq ExpressionChy11G191920
SyntenyChy11G191920
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR016833 - Putative sodium bile acid cotransporter
IPR038770 - Sodium/solute symporter superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040654.1 putative sodium/metabolite cotransporter BASS4 [Cucumis melo var. makuwa]8.84e-11393.58Show/hide
Query:  MAMAFVGTKSLYSLLVSSHRSNPPAFSFQLSHFSSNVALLRSTSLALNRKRQSYSPISACGLPDKKDDGGRINEPTSVSGSENRVSWFETLSTFANNNFL
        MAMAFVGTKSL+   VSSHRSNPPAFSFQ+SHFS NVALLRSTSLALNRKRQSYSPI ACGLPDKKDDGGRINEP SVSGSENRVSW ETLSTFANNNFL
Subjt:  MAMAFVGTKSLYSLLVSSHRSNPPAFSFQLSHFSSNVALLRSTSLALNRKRQSYSPISACGLPDKKDDGGRINEPTSVSGSENRVSWFETLSTFANNNFL

Query:  PLALVTGVAVGVANPSLGCLADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLIMQIHLQPQEFVT
        PLALVTGVAVG+ANPSLGCLADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLI+QIHL PQEFVT
Subjt:  PLALVTGVAVGVANPSLGCLADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLIMQIHLQPQEFVT

XP_004151888.1 probable sodium/metabolite cotransporter BASS4, chloroplastic [Cucumis sativus]1.40e-11695.72Show/hide
Query:  MAMAFVGTKSLYSLLVSSHRSNPPAFSFQLSHFSSNVALLRSTSLALNRKRQSYSPISACGLPDKKDDGGRINEPTSVSGSENRVSWFETLSTFANNNFL
        MAMAFVGTKSLYSLLV SHRSNPPAFSFQ+SHFSSNVALL STSLALNRKR+SY PI ACGLPDKKDDGGRINEPTSVSGSE RVSWFETLSTFANNNFL
Subjt:  MAMAFVGTKSLYSLLVSSHRSNPPAFSFQLSHFSSNVALLRSTSLALNRKRQSYSPISACGLPDKKDDGGRINEPTSVSGSENRVSWFETLSTFANNNFL

Query:  PLALVTGVAVGVANPSLGCLADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLIMQIHLQPQEFVT
        PLALVTGVAVGVANPSLGCLADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLI+QIHLQPQEFVT
Subjt:  PLALVTGVAVGVANPSLGCLADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLIMQIHLQPQEFVT

XP_008455871.1 PREDICTED: probable sodium/metabolite cotransporter BASS4, chloroplastic isoform X1 [Cucumis melo]8.04e-11393.58Show/hide
Query:  MAMAFVGTKSLYSLLVSSHRSNPPAFSFQLSHFSSNVALLRSTSLALNRKRQSYSPISACGLPDKKDDGGRINEPTSVSGSENRVSWFETLSTFANNNFL
        MAMAFVGTKSL+   VSSHRSNPPAFSFQ+SHFS NVALLRSTSLALNRKRQSYSPI ACGLPDKKDDGGRINEP SVSGSENRVSW ETLSTFANNNFL
Subjt:  MAMAFVGTKSLYSLLVSSHRSNPPAFSFQLSHFSSNVALLRSTSLALNRKRQSYSPISACGLPDKKDDGGRINEPTSVSGSENRVSWFETLSTFANNNFL

Query:  PLALVTGVAVGVANPSLGCLADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLIMQIHLQPQEFVT
        PLALVTGVAVG+ANPSLGCLADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLI+QIHL PQEFVT
Subjt:  PLALVTGVAVGVANPSLGCLADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLIMQIHLQPQEFVT

XP_008455872.1 PREDICTED: probable sodium/metabolite cotransporter BASS4, chloroplastic isoform X2 [Cucumis melo]3.86e-11393.58Show/hide
Query:  MAMAFVGTKSLYSLLVSSHRSNPPAFSFQLSHFSSNVALLRSTSLALNRKRQSYSPISACGLPDKKDDGGRINEPTSVSGSENRVSWFETLSTFANNNFL
        MAMAFVGTKSL+   VSSHRSNPPAFSFQ+SHFS NVALLRSTSLALNRKRQSYSPI ACGLPDKKDDGGRINEP SVSGSENRVSW ETLSTFANNNFL
Subjt:  MAMAFVGTKSLYSLLVSSHRSNPPAFSFQLSHFSSNVALLRSTSLALNRKRQSYSPISACGLPDKKDDGGRINEPTSVSGSENRVSWFETLSTFANNNFL

Query:  PLALVTGVAVGVANPSLGCLADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLIMQIHLQPQEFVT
        PLALVTGVAVG+ANPSLGCLADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLI+QIHL PQEFVT
Subjt:  PLALVTGVAVGVANPSLGCLADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLIMQIHLQPQEFVT

XP_038900991.1 probable sodium/metabolite cotransporter BASS4, chloroplastic [Benincasa hispida]2.27e-10790.27Show/hide
Query:  MAFVGTKSLYSLLVSSHRSNPPAFSFQLSHFSSNVALLRSTSLALNRKRQSYSPISACGLPDKKDDGGRINEPTSVSGSENRVSWFETLSTFANNNFLPL
        MA VGTKSL+SLLVSSHRSNPPAF  Q+S +SSN A L S+SLALNRKRQ YSPI ACGLPDKKDDGGRINEP SVSGSENRV+WFE LSTFANNNFLPL
Subjt:  MAFVGTKSLYSLLVSSHRSNPPAFSFQLSHFSSNVALLRSTSLALNRKRQSYSPISACGLPDKKDDGGRINEPTSVSGSENRVSWFETLSTFANNNFLPL

Query:  ALVTGVAVGVANPSLGCLADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLIMQIHLQPQEFVT
        ALVTGVAVGVANPSLGCLADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGL SILLLTPYFSRLI+QIHLQPQEFVT
Subjt:  ALVTGVAVGVANPSLGCLADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLIMQIHLQPQEFVT

TrEMBL top hitse value%identityAlignment
A0A0A0LN64 Uncharacterized protein5.7e-9295.72Show/hide
Query:  MAMAFVGTKSLYSLLVSSHRSNPPAFSFQLSHFSSNVALLRSTSLALNRKRQSYSPISACGLPDKKDDGGRINEPTSVSGSENRVSWFETLSTFANNNFL
        MAMAFVGTKSLYSLLV SHRSNPPAFSFQ+SHFSSNVALL STSLALNRKR+SY PI ACGLPDKKDDGGRINEPTSVSGSE RVSWFETLSTFANNNFL
Subjt:  MAMAFVGTKSLYSLLVSSHRSNPPAFSFQLSHFSSNVALLRSTSLALNRKRQSYSPISACGLPDKKDDGGRINEPTSVSGSENRVSWFETLSTFANNNFL

Query:  PLALVTGVAVGVANPSLGCLADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLIMQIHLQPQEFVT
        PLALVTGVAVGVANPSLGCLADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLI+QIHLQPQEFVT
Subjt:  PLALVTGVAVGVANPSLGCLADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLIMQIHLQPQEFVT

A0A1S3C1I1 probable sodium/metabolite cotransporter BASS4, chloroplastic isoform X23.4e-8993.58Show/hide
Query:  MAMAFVGTKSLYSLLVSSHRSNPPAFSFQLSHFSSNVALLRSTSLALNRKRQSYSPISACGLPDKKDDGGRINEPTSVSGSENRVSWFETLSTFANNNFL
        MAMAFVGTKSL+   VSSHRSNPPAFSFQ+SHFS NVALLRSTSLALNRKRQSYSPI ACGLPDKKDDGGRINEP SVSGSENRVSW ETLSTFANNNFL
Subjt:  MAMAFVGTKSLYSLLVSSHRSNPPAFSFQLSHFSSNVALLRSTSLALNRKRQSYSPISACGLPDKKDDGGRINEPTSVSGSENRVSWFETLSTFANNNFL

Query:  PLALVTGVAVGVANPSLGCLADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLIMQIHLQPQEFVT
        PLALVTGVAVG+ANPSLGCLADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLI+QIHL PQEFVT
Subjt:  PLALVTGVAVGVANPSLGCLADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLIMQIHLQPQEFVT

A0A1S3C366 probable sodium/metabolite cotransporter BASS4, chloroplastic isoform X13.4e-8993.58Show/hide
Query:  MAMAFVGTKSLYSLLVSSHRSNPPAFSFQLSHFSSNVALLRSTSLALNRKRQSYSPISACGLPDKKDDGGRINEPTSVSGSENRVSWFETLSTFANNNFL
        MAMAFVGTKSL+   VSSHRSNPPAFSFQ+SHFS NVALLRSTSLALNRKRQSYSPI ACGLPDKKDDGGRINEP SVSGSENRVSW ETLSTFANNNFL
Subjt:  MAMAFVGTKSLYSLLVSSHRSNPPAFSFQLSHFSSNVALLRSTSLALNRKRQSYSPISACGLPDKKDDGGRINEPTSVSGSENRVSWFETLSTFANNNFL

Query:  PLALVTGVAVGVANPSLGCLADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLIMQIHLQPQEFVT
        PLALVTGVAVG+ANPSLGCLADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLI+QIHL PQEFVT
Subjt:  PLALVTGVAVGVANPSLGCLADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLIMQIHLQPQEFVT

A0A5A7TB17 Putative sodium/metabolite cotransporter BASS43.4e-8993.58Show/hide
Query:  MAMAFVGTKSLYSLLVSSHRSNPPAFSFQLSHFSSNVALLRSTSLALNRKRQSYSPISACGLPDKKDDGGRINEPTSVSGSENRVSWFETLSTFANNNFL
        MAMAFVGTKSL+   VSSHRSNPPAFSFQ+SHFS NVALLRSTSLALNRKRQSYSPI ACGLPDKKDDGGRINEP SVSGSENRVSW ETLSTFANNNFL
Subjt:  MAMAFVGTKSLYSLLVSSHRSNPPAFSFQLSHFSSNVALLRSTSLALNRKRQSYSPISACGLPDKKDDGGRINEPTSVSGSENRVSWFETLSTFANNNFL

Query:  PLALVTGVAVGVANPSLGCLADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLIMQIHLQPQEFVT
        PLALVTGVAVG+ANPSLGCLADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLI+QIHL PQEFVT
Subjt:  PLALVTGVAVGVANPSLGCLADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLIMQIHLQPQEFVT

A0A5D3DKR1 Putative sodium/metabolite cotransporter BASS43.4e-8993.58Show/hide
Query:  MAMAFVGTKSLYSLLVSSHRSNPPAFSFQLSHFSSNVALLRSTSLALNRKRQSYSPISACGLPDKKDDGGRINEPTSVSGSENRVSWFETLSTFANNNFL
        MAMAFVGTKSL+   VSSHRSNPPAFSFQ+SHFS NVALLRSTSLALNRKRQSYSPI ACGLPDKKDDGGRINEP SVSGSENRVSW ETLSTFANNNFL
Subjt:  MAMAFVGTKSLYSLLVSSHRSNPPAFSFQLSHFSSNVALLRSTSLALNRKRQSYSPISACGLPDKKDDGGRINEPTSVSGSENRVSWFETLSTFANNNFL

Query:  PLALVTGVAVGVANPSLGCLADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLIMQIHLQPQEFVT
        PLALVTGVAVG+ANPSLGCLADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLI+QIHL PQEFVT
Subjt:  PLALVTGVAVGVANPSLGCLADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLIMQIHLQPQEFVT

SwissProt top hitse value%identityAlignment
B8AJ09 Probable sodium/metabolite cotransporter BASS4, chloroplastic1.2e-2752.5Show/hide
Query:  DGGRINEPTSVSGSENRVSWFETLSTFANNNFLPLALVTGVAVGVANPSLGCLADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLL
        DG +   P + S S         L  FA +NFLPLAL+ G+A+ + +P+LGCLA +Y LSK+STFGIF+ISGLTLRT E+ A++EAWP  ++GL SILL 
Subjt:  DGGRINEPTSVSGSENRVSWFETLSTFANNNFLPLALVTGVAVGVANPSLGCLADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLL

Query:  TPYFSRLIMQIHLQPQEFVT
        TP+ ++ IMQI   P EF+T
Subjt:  TPYFSRLIMQIHLQPQEFVT

F4IZC4 Probable sodium/metabolite cotransporter BASS4, chloroplastic5.4e-3155.38Show/hide
Query:  SACGLPDKKDDGGRINEPTSVSGSENRVSWFETLSTFANNNFLPLALVTGVAVGVANPSLGCLADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVA
        S+CG  ++   GG       +S S  R+ + + L +FA++NFLPLALV+GV +G ANP+LGCLAD+Y  +K ST GIF+ISGLTLRT  I A+V+ WP+ 
Subjt:  SACGLPDKKDDGGRINEPTSVSGSENRVSWFETLSTFANNNFLPLALVTGVAVGVANPSLGCLADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVA

Query:  VYGLVSILLLTPYFSRLIMQIHLQPQEFVT
        ++GL+SILLLTP FSRLIM + LQP+E VT
Subjt:  VYGLVSILLLTPYFSRLIMQIHLQPQEFVT

Q6ESG1 Probable sodium/metabolite cotransporter BASS4, chloroplastic1.2e-2752.5Show/hide
Query:  DGGRINEPTSVSGSENRVSWFETLSTFANNNFLPLALVTGVAVGVANPSLGCLADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLL
        DG +   P + S S         L  FA +NFLPLAL+ G+A+ + +P+LGCLA +Y LSK+STFGIF+ISGLTLRT E+ A++EAWP  ++GL SILL 
Subjt:  DGGRINEPTSVSGSENRVSWFETLSTFANNNFLPLALVTGVAVGVANPSLGCLADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLL

Query:  TPYFSRLIMQIHLQPQEFVT
        TP+ ++ IMQI   P EF+T
Subjt:  TPYFSRLIMQIHLQPQEFVT

Arabidopsis top hitse value%identityAlignment
AT3G56160.1 Sodium Bile acid symporter family3.8e-3255.38Show/hide
Query:  SACGLPDKKDDGGRINEPTSVSGSENRVSWFETLSTFANNNFLPLALVTGVAVGVANPSLGCLADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVA
        S+CG  ++   GG       +S S  R+ + + L +FA++NFLPLALV+GV +G ANP+LGCLAD+Y  +K ST GIF+ISGLTLRT  I A+V+ WP+ 
Subjt:  SACGLPDKKDDGGRINEPTSVSGSENRVSWFETLSTFANNNFLPLALVTGVAVGVANPSLGCLADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVA

Query:  VYGLVSILLLTPYFSRLIMQIHLQPQEFVT
        ++GL+SILLLTP FSRLIM + LQP+E VT
Subjt:  VYGLVSILLLTPYFSRLIMQIHLQPQEFVT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTATGGCGTTCGTGGGAACCAAATCCCTCTATAGTCTTCTCGTTTCGTCTCATCGGAGCAATCCACCGGCCTTTTCTTTCCAACTTTCTCATTTCTCCTCTAATGT
CGCACTCTTGCGTTCCACTTCTCTCGCTTTGAATCGCAAACGCCAAAGTTATAGTCCCATCAGTGCCTGCGGATTGCCCGATAAGAAAGACGATGGTGGAAGAATAAACG
AACCTACCAGTGTTTCGGGTTCGGAAAATAGAGTTAGTTGGTTCGAGACCTTATCAACTTTTGCAAATAATAATTTTCTTCCTCTAGCTCTTGTCACTGGTGTAGCAGTT
GGAGTTGCAAATCCAAGTCTTGGATGTCTTGCTGATAGGTATTATCTCTCAAAGTTTAGCACATTTGGGATATTTGTCATTTCAGGGTTGACATTGCGTACATCAGAAAT
TAGTGCCTCAGTGGAAGCGTGGCCTGTTGCAGTTTATGGGCTTGTTTCGATTCTTTTGCTTACTCCATACTTTTCCAGGCTGATAATGCAAATTCATCTTCAACCTCAAG
AATTTGTAACAGTGGCCTATATGCATCCTGGTATTTACTACTCGGTGATCCAGTTAGCCTTAAGGCCCTCAACCAAATTCAATGGACCATTTGTGTGGATAAATGAAAAA
TCAGTTAGG
mRNA sequenceShow/hide mRNA sequence
ATGGCTATGGCGTTCGTGGGAACCAAATCCCTCTATAGTCTTCTCGTTTCGTCTCATCGGAGCAATCCACCGGCCTTTTCTTTCCAACTTTCTCATTTCTCCTCTAATGT
CGCACTCTTGCGTTCCACTTCTCTCGCTTTGAATCGCAAACGCCAAAGTTATAGTCCCATCAGTGCCTGCGGATTGCCCGATAAGAAAGACGATGGTGGAAGAATAAACG
AACCTACCAGTGTTTCGGGTTCGGAAAATAGAGTTAGTTGGTTCGAGACCTTATCAACTTTTGCAAATAATAATTTTCTTCCTCTAGCTCTTGTCACTGGTGTAGCAGTT
GGAGTTGCAAATCCAAGTCTTGGATGTCTTGCTGATAGGTATTATCTCTCAAAGTTTAGCACATTTGGGATATTTGTCATTTCAGGGTTGACATTGCGTACATCAGAAAT
TAGTGCCTCAGTGGAAGCGTGGCCTGTTGCAGTTTATGGGCTTGTTTCGATTCTTTTGCTTACTCCATACTTTTCCAGGCTGATAATGCAAATTCATCTTCAACCTCAAG
AATTTGTAACAGTGGCCTATATGCATCCTGGTATTTACTACTCGGTGATCCAGTTAGCCTTAAGGCCCTCAACCAAATTCAATGGACCATTTGTGTGGATAAATGAAAAA
TCAGTTAGG
Protein sequenceShow/hide protein sequence
MAMAFVGTKSLYSLLVSSHRSNPPAFSFQLSHFSSNVALLRSTSLALNRKRQSYSPISACGLPDKKDDGGRINEPTSVSGSENRVSWFETLSTFANNNFLPLALVTGVAV
GVANPSLGCLADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLIMQIHLQPQEFVTVAYMHPGIYYSVIQLALRPSTKFNGPFVWINEK
SVR