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Chy11G192520 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy11G192520
OrganismCucumis hystrix (Cucumber (hystrix) v1)
Descriptionprotein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like
Genome locationchrH11:8363019..8363489
RNA-Seq ExpressionChy11G192520
SyntenyChy11G192520
Gene Ontology termsGO:0000741 - karyogamy (biological process)
InterPro domainsIPR033251 - Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial
IPR043459 - NFD6/NOXY2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652269.1 hypothetical protein Csa_021983 [Cucumis sativus]6.93e-5597.83Show/hide
Query:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSSSPFRMATNKPLSHRSFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEGA
        MASIGARSAFRSFSGSARRAAAHIGSQPK SSSSPFRMATNKPLSHR+FRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEGA
Subjt:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSSSPFRMATNKPLSHRSFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEGA

KGN63196.1 hypothetical protein Csa_022217 [Cucumis sativus]2.42e-5597.83Show/hide
Query:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSSSPFRMATNKPLSHRSFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEGA
        MASIGARSAFRSFSGSARRAAAHIGSQPKPS SSPFRMATNKPLSHR+FRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEGA
Subjt:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSSSPFRMATNKPLSHRSFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEGA

XP_011649972.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X2 [Cucumis sativus]1.11e-5497.8Show/hide
Query:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSSSPFRMATNKPLSHRSFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEG
        MASIGARSAFRSFSGSARRAAAHIGSQPKPS SSPFRMATNKPLSHR+FRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEG
Subjt:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSSSPFRMATNKPLSHRSFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEG

XP_011649974.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X2 [Cucumis sativus]3.20e-5497.8Show/hide
Query:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSSSPFRMATNKPLSHRSFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEG
        MASIGARSAFRSFSGSARRAAAHIGSQPK SSSSPFRMATNKPLSHR+FRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEG
Subjt:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSSSPFRMATNKPLSHRSFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEG

XP_011649976.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X3 [Cucumis sativus]2.83e-5497.8Show/hide
Query:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSSSPFRMATNKPLSHRSFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEG
        MASIGARSAFRSFSGSARRAAAHIGSQPK SSSSPFRMATNKPLSHR+FRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEG
Subjt:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSSSPFRMATNKPLSHRSFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEG

TrEMBL top hitse value%identityAlignment
A0A0A0LMP1 Uncharacterized protein5.2e-3997.78Show/hide
Query:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSSSPFRMATNKPLSHRSFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPE
        MASIGARSAFRSFSGSARRAAAHIGSQPK SSSSPFRMATNKPLSHR+FRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPE
Subjt:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSSSPFRMATNKPLSHRSFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPE

A0A0A0LN06 Uncharacterized protein2.7e-4097.83Show/hide
Query:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSSSPFRMATNKPLSHRSFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEGA
        MASIGARSAFRSFSGSARRAAAHIGSQPK SSSSPFRMATNKPLSHR+FRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEGA
Subjt:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSSSPFRMATNKPLSHRSFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEGA

A0A0A0LT36 Uncharacterized protein1.2e-4097.83Show/hide
Query:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSSSPFRMATNKPLSHRSFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEGA
        MASIGARSAFRSFSGSARRAAAHIGSQPKPS SSPFRMATNKPLSHR+FRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEGA
Subjt:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSSSPFRMATNKPLSHRSFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEGA

A0A1S4E0Y3 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X18.8e-3995.6Show/hide
Query:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSSSPFRMATNKPLSHRSFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEG
        MASIGARSAFRSFSGSARRAAAHIGSQPKPSS+SPFRMATNKPLSH +FRCAP MSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEG
Subjt:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSSSPFRMATNKPLSHRSFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEG

A0A5D3BHH0 Protein NUCLEAR FUSION DEFECTIVE 68.8e-3995.6Show/hide
Query:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSSSPFRMATNKPLSHRSFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEG
        MASIGARSAFRSFSGSARRAAAHIGSQPKPSS+SPFRMATNKPLSH +FRCAP MSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEG
Subjt:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSSSPFRMATNKPLSHRSFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEG

SwissProt top hitse value%identityAlignment
Q93ZJ3 Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial3.8e-0743.18Show/hide
Query:  GARSAFRSFSGSARRAAAHIGSQPKPSSSSP--FRMATNKPLSHRSFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPE
        GARS  R  + S+R AAA  G     + S+P  FR    +       R   E+SFC+ES++P+HS ++SALMTS LSIS  + GWL +
Subjt:  GARSAFRSFSGSARRAAAHIGSQPKPSSSSP--FRMATNKPLSHRSFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPE

Arabidopsis top hitse value%identityAlignment
AT1G28395.1 unknown protein6.9e-1244.94Show/hide
Query:  ARSAFRSFSGSARRAAAHIGSQPKPSSSS---PFRMATNKPLSHRSFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEG
        ARS FRS +  A   A    + PKP  SS    FRM    PL++R FR   E+S C+E+M+P+H+ ++SAL+ SMLS+SR   GW+ +G
Subjt:  ARSAFRSFSGSARRAAAHIGSQPKPSSSS---PFRMATNKPLSHRSFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEG

AT1G28395.2 unknown protein6.9e-1244.94Show/hide
Query:  ARSAFRSFSGSARRAAAHIGSQPKPSSSS---PFRMATNKPLSHRSFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEG
        ARS FRS +  A   A    + PKP  SS    FRM    PL++R FR   E+S C+E+M+P+H+ ++SAL+ SMLS+SR   GW+ +G
Subjt:  ARSAFRSFSGSARRAAAHIGSQPKPSSSS---PFRMATNKPLSHRSFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEG

AT1G28395.3 unknown protein6.9e-1244.94Show/hide
Query:  ARSAFRSFSGSARRAAAHIGSQPKPSSSS---PFRMATNKPLSHRSFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEG
        ARS FRS +  A   A    + PKP  SS    FRM    PL++R FR   E+S C+E+M+P+H+ ++SAL+ SMLS+SR   GW+ +G
Subjt:  ARSAFRSFSGSARRAAAHIGSQPKPSSSS---PFRMATNKPLSHRSFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEG

AT1G28395.4 unknown protein4.5e-1145.35Show/hide
Query:  ARSAFRSFSGSARRAAAHIGSQPKPSSSS---PFRMATNKPLSHRSFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWL
        ARS FRS +  A   A    + PKP  SS    FRM    PL++R FR   E+S C+E+M+P+H+ ++SAL+ SMLS+SR   GW+
Subjt:  ARSAFRSFSGSARRAAAHIGSQPKPSSSS---PFRMATNKPLSHRSFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWL

AT1G28395.5 unknown protein4.5e-1145.35Show/hide
Query:  ARSAFRSFSGSARRAAAHIGSQPKPSSSS---PFRMATNKPLSHRSFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWL
        ARS FRS +  A   A    + PKP  SS    FRM    PL++R FR   E+S C+E+M+P+H+ ++SAL+ SMLS+SR   GW+
Subjt:  ARSAFRSFSGSARRAAAHIGSQPKPSSSS---PFRMATNKPLSHRSFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCAATTGGTGCTCGGTCTGCTTTCCGGTCATTCTCCGGTTCGGCACGCCGTGCTGCTGCTCACATCGGTTCTCAACCCAAGCCCTCATCATCCTCTCCCTTTCG
CATGGCAACTAACAAACCCCTCTCTCATCGTTCCTTCAGGTGTGCGCCTGAGATGAGCTTCTGTTTGGAGTCAATGATGCCATTTCACTCTGTGTCGTCCTCAGCTTTGA
TGACATCAATGCTCTCTATCTCGCGCCACAGCTGCGGTTGGCTCCCCGAAGGTGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCTCAATTGGTGCTCGGTCTGCTTTCCGGTCATTCTCCGGTTCGGCACGCCGTGCTGCTGCTCACATCGGTTCTCAACCCAAGCCCTCATCATCCTCTCCCTTTCG
CATGGCAACTAACAAACCCCTCTCTCATCGTTCCTTCAGGTGTGCGCCTGAGATGAGCTTCTGTTTGGAGTCAATGATGCCATTTCACTCTGTGTCGTCCTCAGCTTTGA
TGACATCAATGCTCTCTATCTCGCGCCACAGCTGCGGTTGGCTCCCCGAAGGTGCATAA
Protein sequenceShow/hide protein sequence
MASIGARSAFRSFSGSARRAAAHIGSQPKPSSSSPFRMATNKPLSHRSFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEGA