CuGenDBv2

Gene ID	Chy11G193020
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Nuclear transcription factor Y subunit B-3
Genome location	chrH11:9530917..9531443
RNA-Seq Expression	Chy11G193020
Synteny	Chy11G193020
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0060802.1 uncharacterized protein E6C27_scaffold137G00220 [Cucumis melo var. makuwa]

9.08e-102

88.89

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Query:  MSMLYFSISKRNSLPIRKFVQE-----EEEEEEEEEDQKQRTSFSDHLKSSSASAPTIGDLLSESECADDNFTTSEESEVEWPYFDHRFYKTRNPHRSDE
        MSMLYFSISKR+SLPI+KFVQE     EEEEEEEEEDQK+ T FSDHLKSSSASAPT  DLLSESECADDNFTT+EESEVEWPYFDHRFYK R+PHRSD+
Subjt:  MSMLYFSISKRNSLPIRKFVQE-----EEEEEEEEEDQKQRTSFSDHLKSSSASAPTIGDLLSESECADDNFTTSEESEVEWPYFDHRFYKTRNPHRSDE

Query:  GSISDEESLIEIALPTGHYVSRKFDDVDEDEDDDDISFRYQKLSDFQRKNLVEVLAEINDINEEENLIEIDISMGSIKYS
        GSISDEESLIEIALPTGHYVSRKFDDVDEDED+DD  FRYQKLSDFQ+KNLVEVLAEINDINEEENLIEIDISMGSIKYS
Subjt:  GSISDEESLIEIALPTGHYVSRKFDDVDEDEDDDDISFRYQKLSDFQRKNLVEVLAEINDINEEENLIEIDISMGSIKYS

TYK11971.1 uncharacterized protein E5676_scaffold177G001550 [Cucumis melo var. makuwa]

5.85e-101

89.71

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Query:  MSMLYFSISKRNSLPIRKFVQEEEEEEEEEEDQKQRTSFSDHLKSSSASAPTIGDLLSESECADDNFTTSEESEVEWPYFDHRFYKTRNPHRSDEGSISD
        MSMLYFSISKR+SLPI+KFVQE+EEEEEE  DQK+ T FSDHLKSSSASAPT  DLLSESECADDNFTT+EESEVEWPYFDHRFYK R+PHRSD+GSISD
Subjt:  MSMLYFSISKRNSLPIRKFVQEEEEEEEEEEDQKQRTSFSDHLKSSSASAPTIGDLLSESECADDNFTTSEESEVEWPYFDHRFYKTRNPHRSDEGSISD

Query:  EESLIEIALPTGHYVSRKFDDVDEDEDDDDISFRYQKLSDFQRKNLVEVLAEINDINEEENLIEIDISMGSIKYS
        EESLIEIALPTGHYVSRKFDDVDEDED+DD  FRYQKLSDFQ+KNLVEVLAEINDINEEENLIEIDISMGSIKYS
Subjt:  EESLIEIALPTGHYVSRKFDDVDEDEDDDDISFRYQKLSDFQRKNLVEVLAEINDINEEENLIEIDISMGSIKYS

XP_008464163.1 PREDICTED: uncharacterized protein LOC103502111 [Cucumis melo]

3.63e-100

89.71

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Query:  MSMLYFSISKRNSLPIRKFVQEEEEEEEEEEDQKQRTSFSDHLKSSSASAPTIGDLLSESECADDNFTTSEESEVEWPYFDHRFYKTRNPHRSDEGSISD
        MSMLYFSISKR+SLPI+KFVQE+EEEEEE  DQK+ T FSDHLKSSSASAPT  DLLSESECADDNFTT+EESEVEWPYFDHRFYK R+PHRSD+GSISD
Subjt:  MSMLYFSISKRNSLPIRKFVQEEEEEEEEEEDQKQRTSFSDHLKSSSASAPTIGDLLSESECADDNFTTSEESEVEWPYFDHRFYKTRNPHRSDEGSISD

Query:  EESLIEIALPTGHYVSRKFDDVDEDEDDDDISFRYQKLSDFQRKNLVEVLAEINDINEEENLIEIDISMGSIKYS
        EESLIEIALPTGHYVSRKFDDVDEDED+DD  FRYQKLSDFQ+KNLVEVLAEINDINEEENLIEIDISMGSIKYS
Subjt:  EESLIEIALPTGHYVSRKFDDVDEDEDDDDISFRYQKLSDFQRKNLVEVLAEINDINEEENLIEIDISMGSIKYS

XP_011656887.2 uncharacterized protein LOC105435780 [Cucumis sativus]

1.28e-102

94.29

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Query:  MSMLYFSISKRNSLPIRKFVQEEEEEEEEEEDQKQRTSFSDHLKSSSASAPTIGDLLSESECADDNFTTSEESEVEWPYFDHRFYKTRNPHRSDEGSISD
        MSMLYFSISKRNSLPIRKFVQEEEEEEEEE DQKQ T FSDHLKSSSASAPTI DLLSESECADDNFTT+EESEVEWPYFDHRF KTRNPHRSD+GSISD
Subjt:  MSMLYFSISKRNSLPIRKFVQEEEEEEEEEEDQKQRTSFSDHLKSSSASAPTIGDLLSESECADDNFTTSEESEVEWPYFDHRFYKTRNPHRSDEGSISD

Query:  EESLIEIALPTGHYVSRKFDDVDEDEDDDDISFRYQKLSDFQRKNLVEVLAEINDINEEENLIEIDISMGSIKYS
        EESLIEIALPTGHYVSRKFDDVDEDEDD  ISFRYQKL+DFQRKNLVEVLAEINDINEEENLIEIDISMGSIKYS
Subjt:  EESLIEIALPTGHYVSRKFDDVDEDEDDDDISFRYQKLSDFQRKNLVEVLAEINDINEEENLIEIDISMGSIKYS

XP_038902685.1 uncharacterized protein LOC120089322 [Benincasa hispida]

1.11e-94

87.43

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Query:  MSMLYFSISKRNSLPIRKFVQEEEEEEEEEEDQKQRTSFSDHLKSSSASAPTIGDLLSESECADDNFTTSEESEVEWPYFDHRFYKTRNPHRSDEGSISD
        MSMLYFSISKRNSLPI+KFVQ+ +EEEEEE DQK+ T FSDHLKSSS SAPT GDLLSESECADDNFTT+EESEVEWPYFDHR YK  NP RSD+GSISD
Subjt:  MSMLYFSISKRNSLPIRKFVQEEEEEEEEEEDQKQRTSFSDHLKSSSASAPTIGDLLSESECADDNFTTSEESEVEWPYFDHRFYKTRNPHRSDEGSISD

Query:  EESLIEIALPTGHYVSRKFDDVDEDEDDDDISFRYQKLSDFQRKNLVEVLAEINDINEEENLIEIDISMGSIKYS
        EESLIEIALPTGHYVS KFDDVD DED+D +SFRYQKLSDFQ+KNLVEVLAEINDINEEENLIEIDISMGSIKYS
Subjt:  EESLIEIALPTGHYVSRKFDDVDEDEDDDDISFRYQKLSDFQRKNLVEVLAEINDINEEENLIEIDISMGSIKYS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KCP7 Uncharacterized protein

1.4e-77

92.57

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Query:  MSMLYFSISKRNSLPIRKFVQEEEEEEEEEEDQKQRTSFSDHLKSSSASAPTIGDLLSESECADDNFTTSEESEVEWPYFDHRFYKTRNPHRSDEGSISD
        MSMLYFSISKRNSLPIRKFVQ    EEEEEEDQKQ T FSDHLKSSSASAPTI DLLSESECADDNFTT+EESEVEWPYFDHRF KTRNPHRSD+GSISD
Subjt:  MSMLYFSISKRNSLPIRKFVQEEEEEEEEEEDQKQRTSFSDHLKSSSASAPTIGDLLSESECADDNFTTSEESEVEWPYFDHRFYKTRNPHRSDEGSISD

Query:  EESLIEIALPTGHYVSRKFDDVDEDEDDDDISFRYQKLSDFQRKNLVEVLAEINDINEEENLIEIDISMGSIKYS
        EESLIEIALPTGHYVSRKFDDVDEDE  DDISFRYQKL+DFQRKNLVEVLAEINDINEEENLIEIDISMGSIKYS
Subjt:  EESLIEIALPTGHYVSRKFDDVDEDEDDDDISFRYQKLSDFQRKNLVEVLAEINDINEEENLIEIDISMGSIKYS

A0A1S3CMD0 uncharacterized protein LOC103502111

3.1e-77

89.71

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Query:  MSMLYFSISKRNSLPIRKFVQEEEEEEEEEEDQKQRTSFSDHLKSSSASAPTIGDLLSESECADDNFTTSEESEVEWPYFDHRFYKTRNPHRSDEGSISD
        MSMLYFSISKR+SLPI+KFVQ  E+EEEEEEDQK+ T FSDHLKSSSASAPT  DLLSESECADDNFTT+EESEVEWPYFDHRFYK R+PHRSD+GSISD
Subjt:  MSMLYFSISKRNSLPIRKFVQEEEEEEEEEEDQKQRTSFSDHLKSSSASAPTIGDLLSESECADDNFTTSEESEVEWPYFDHRFYKTRNPHRSDEGSISD

Query:  EESLIEIALPTGHYVSRKFDDVDEDEDDDDISFRYQKLSDFQRKNLVEVLAEINDINEEENLIEIDISMGSIKYS
        EESLIEIALPTGHYVSRKFDDVDEDED+DD  FRYQKLSDFQ+KNLVEVLAEINDINEEENLIEIDISMGSIKYS
Subjt:  EESLIEIALPTGHYVSRKFDDVDEDEDDDDISFRYQKLSDFQRKNLVEVLAEINDINEEENLIEIDISMGSIKYS

A0A5A7UY43 Uncharacterized protein

4.8e-78

88.89

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Query:  MSMLYFSISKRNSLPIRKFVQ-----EEEEEEEEEEDQKQRTSFSDHLKSSSASAPTIGDLLSESECADDNFTTSEESEVEWPYFDHRFYKTRNPHRSDE
        MSMLYFSISKR+SLPI+KFVQ     EEEEEEEEEEDQK+ T FSDHLKSSSASAPT  DLLSESECADDNFTT+EESEVEWPYFDHRFYK R+PHRSD+
Subjt:  MSMLYFSISKRNSLPIRKFVQ-----EEEEEEEEEEDQKQRTSFSDHLKSSSASAPTIGDLLSESECADDNFTTSEESEVEWPYFDHRFYKTRNPHRSDE

Query:  GSISDEESLIEIALPTGHYVSRKFDDVDEDEDDDDISFRYQKLSDFQRKNLVEVLAEINDINEEENLIEIDISMGSIKYS
        GSISDEESLIEIALPTGHYVSRKFDDVDEDED+DD  FRYQKLSDFQ+KNLVEVLAEINDINEEENLIEIDISMGSIKYS
Subjt:  GSISDEESLIEIALPTGHYVSRKFDDVDEDEDDDDISFRYQKLSDFQRKNLVEVLAEINDINEEENLIEIDISMGSIKYS

A0A5D3CJH9 Uncharacterized protein

3.1e-77

89.71

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Query:  MSMLYFSISKRNSLPIRKFVQEEEEEEEEEEDQKQRTSFSDHLKSSSASAPTIGDLLSESECADDNFTTSEESEVEWPYFDHRFYKTRNPHRSDEGSISD
        MSMLYFSISKR+SLPI+KFVQ  E+EEEEEEDQK+ T FSDHLKSSSASAPT  DLLSESECADDNFTT+EESEVEWPYFDHRFYK R+PHRSD+GSISD
Subjt:  MSMLYFSISKRNSLPIRKFVQEEEEEEEEEEDQKQRTSFSDHLKSSSASAPTIGDLLSESECADDNFTTSEESEVEWPYFDHRFYKTRNPHRSDEGSISD

Query:  EESLIEIALPTGHYVSRKFDDVDEDEDDDDISFRYQKLSDFQRKNLVEVLAEINDINEEENLIEIDISMGSIKYS
        EESLIEIALPTGHYVSRKFDDVDEDED+DD  FRYQKLSDFQ+KNLVEVLAEINDINEEENLIEIDISMGSIKYS
Subjt:  EESLIEIALPTGHYVSRKFDDVDEDEDDDDISFRYQKLSDFQRKNLVEVLAEINDINEEENLIEIDISMGSIKYS

A0A6J1CG35 uncharacterized protein LOC111011203

1.7e-54

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Query:  MSMLYFSISKRNSLPIRKFVQEEEEEEEEEEDQKQRTSFSDHLKSSSASAPTIGDLLSESECADDNFTTSEESEVEWPYFDHRFYKTRNPHRSDEGSISD
        MSMLYF+ISKRNSLPI   +  E+  EEEEE+ +   SF    K SSASAPT GDLLSESECADDNFTT+EESEVEWP+ D       NP RSD GSISD
Subjt:  MSMLYFSISKRNSLPIRKFVQEEEEEEEEEEDQKQRTSFSDHLKSSSASAPTIGDLLSESECADDNFTTSEESEVEWPYFDHRFYKTRNPHRSDEGSISD

Query:  EESLIEIALPTGHYVSRKFDDVDEDEDDDDISFRYQKLSDFQR-KNLVEVLAEINDINEEENLIEIDISMGSIKYS
        EESLIEIALPTGHYVS KFDD +EDED+DD+SF  QKLSDFQ+ KNLVE+LAEINDINEEENLIEIDISMGSIKYS
Subjt:  EESLIEIALPTGHYVSRKFDDVDEDEDDDDISFRYQKLSDFQR-KNLVEVLAEINDINEEENLIEIDISMGSIKYS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G04480.1 unknown protein

3.1e-13

47.56

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Query:  DEGSISDEESLIEIALPTGHYVSRKFDDVDEDEDDDDISFRYQKLSDFQRKNLVEVLAEINDINEEENLIEIDISMGSIKYS
        D+G+I D+ESLIE++LP+GHY+   ++       + +  + + K+ DF+   L ++L EIND  EE+NLIEIDIS+GSIKYS
Subjt:  DEGSISDEESLIEIALPTGHYVSRKFDDVDEDEDDDDISFRYQKLSDFQRKNLVEVLAEINDINEEENLIEIDISMGSIKYS

AT5G35870.1 unknown protein

9.4e-10

43.9

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Query:  DEGSISDEESLIEIALPTGHYVSRKFDDVDEDEDDDDISFRYQKLSDFQRKNLVEVLAEINDINEEENLIEIDISMGSIKYS
        D+G+I DEESLIE++LP+GHY+   +  +   +D       Y  + DF+   L+++ AE     E++NLIEIDIS+GSIK S
Subjt:  DEGSISDEESLIEIALPTGHYVSRKFDDVDEDEDDDDISFRYQKLSDFQRKNLVEVLAEINDINEEENLIEIDISMGSIKYS

Sequences

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CDS sequence

Show/hide CDS sequence

ATGTCTATGCTTTATTTCTCAATCTCGAAAAGAAATTCACTACCTATTCGGAAATTTGTACAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATCAGAAACAACGGAC
CTCTTTTTCTGATCACTTGAAATCGTCGTCGGCGTCAGCTCCAACGATCGGAGACTTGCTGTCGGAAAGTGAATGTGCCGATGATAATTTCACGACCTCCGAGGAATCTG
AAGTGGAGTGGCCGTATTTTGACCATCGGTTCTATAAAACCAGAAACCCGCACCGGTCTGATGAAGGTTCGATTTCCGACGAGGAAAGTTTGATTGAAATCGCTCTCCCG
ACCGGACATTACGTCAGCCGTAAGTTTGATGACGTCGACGAGGACGAGGACGATGACGACATATCGTTTCGTTACCAGAAACTGTCGGATTTTCAAAGGAAGAATCTTGT
GGAGGTGTTGGCTGAAATTAACGACATCAATGAGGAGGAGAACTTGATCGAGATCGACATATCAATGGGCTCCATTAAATATTCAAG

mRNA sequence

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Protein sequence

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MSMLYFSISKRNSLPIRKFVQEEEEEEEEEEDQKQRTSFSDHLKSSSASAPTIGDLLSESECADDNFTTSEESEVEWPYFDHRFYKTRNPHRSDEGSISDEESLIEIALP
TGHYVSRKFDDVDEDEDDDDISFRYQKLSDFQRKNLVEVLAEINDINEEENLIEIDISMGSIKYSX

Chy11G193020 (gene) of Cucumber (hystrix) v1 genome