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Chy11G193460 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy11G193460
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionF-box/LRR-repeat protein 4
Genome locationchrH11:10657153..10657305
RNA-Seq ExpressionChy11G193460
SyntenyChy11G193460
Gene Ontology termsGO:0006289 - nucleotide-excision repair (biological process)
GO:0006955 - immune response (biological process)
GO:0010225 - response to UV-C (biological process)
GO:0031146 - SCF-dependent proteasomal ubiquitin-dependent protein catabolic process (biological process)
GO:0098542 - defense response to other organism (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0019005 - SCF ubiquitin ligase complex (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR001611 - Leucine-rich repeat
IPR032675 - Leucine-rich repeat domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144962.1 F-box/LRR-repeat protein 4 [Cucumis sativus]1.11e-2087.76Show/hide
Query:  GDEALIAIGKGCSLHQLNVSGCHHISDKGIAAIARGCPKLSYLDVCMLE
        GDEALIAIGKGCSLHQLNVSGCH I D+GIAAIARGCP+LSYLDV +LE
Subjt:  GDEALIAIGKGCSLHQLNVSGCHHISDKGIAAIARGCPKLSYLDVCMLE
XP_008458533.1 PREDICTED: F-box/LRR-repeat protein 4 [Cucumis melo]1.11e-2087.76Show/hide
Query:  GDEALIAIGKGCSLHQLNVSGCHHISDKGIAAIARGCPKLSYLDVCMLE
        GDEALIAIGKGCSLHQLNVSGCH I D+GIAAIARGCP+LSYLDV +LE
Subjt:  GDEALIAIGKGCSLHQLNVSGCHHISDKGIAAIARGCPKLSYLDVCMLE
XP_022138586.1 F-box/LRR-repeat protein 4 [Momordica charantia]2.09e-2087.76Show/hide
Query:  GDEALIAIGKGCSLHQLNVSGCHHISDKGIAAIARGCPKLSYLDVCMLE
        GDEALIAIGKGCSLHQLNVSGCH I D GIAAIARGCP+LSYLDV +LE
Subjt:  GDEALIAIGKGCSLHQLNVSGCHHISDKGIAAIARGCPKLSYLDVCMLE
XP_023548821.1 F-box/LRR-repeat protein 4-like [Cucurbita pepo subsp. pepo]9.89e-2085.71Show/hide
Query:  GDEALIAIGKGCSLHQLNVSGCHHISDKGIAAIARGCPKLSYLDVCMLE
        GDEALIAIGKGCSLHQLNVSGCH I D GIAAIARGCP+LS+LDV +LE
Subjt:  GDEALIAIGKGCSLHQLNVSGCHHISDKGIAAIARGCPKLSYLDVCMLE
XP_038874656.1 F-box/LRR-repeat protein 4 [Benincasa hispida]1.11e-2087.76Show/hide
Query:  GDEALIAIGKGCSLHQLNVSGCHHISDKGIAAIARGCPKLSYLDVCMLE
        GDEALIAIGKGCSLHQLNVSGCH I D+GIAAIARGCP+LSYLDV +LE
Subjt:  GDEALIAIGKGCSLHQLNVSGCHHISDKGIAAIARGCPKLSYLDVCMLE
TrEMBL top hitse value%identityAlignment
A0A0A0KCP6 F-box_5 domain-containing protein2.0e-1687.76Show/hide
Query:  GDEALIAIGKGCSLHQLNVSGCHHISDKGIAAIARGCPKLSYLDVCMLE
        GDEALIAIGKGCSLHQLNVSGCH I D+GIAAIARGCP+LSYLDV +LE
Subjt:  GDEALIAIGKGCSLHQLNVSGCHHISDKGIAAIARGCPKLSYLDVCMLE
A0A1S3C8N0 F-box/LRR-repeat protein 42.0e-1687.76Show/hide
Query:  GDEALIAIGKGCSLHQLNVSGCHHISDKGIAAIARGCPKLSYLDVCMLE
        GDEALIAIGKGCSLHQLNVSGCH I D+GIAAIARGCP+LSYLDV +LE
Subjt:  GDEALIAIGKGCSLHQLNVSGCHHISDKGIAAIARGCPKLSYLDVCMLE
A0A6J1CA51 F-box/LRR-repeat protein 43.4e-1687.76Show/hide
Query:  GDEALIAIGKGCSLHQLNVSGCHHISDKGIAAIARGCPKLSYLDVCMLE
        GDEALIAIGKGCSLHQLNVSGCH I D GIAAIARGCP+LSYLDV +LE
Subjt:  GDEALIAIGKGCSLHQLNVSGCHHISDKGIAAIARGCPKLSYLDVCMLE
A0A6J1H3K1 F-box/LRR-repeat protein 4-like4.9e-1583.67Show/hide
Query:  GDEALIAIGKGCSLHQLNVSGCHHISDKGIAAIARGCPKLSYLDVCMLE
        GDEALIAIGKGCSLHQLNVSGCH I D GIAAIARGCP+L +LDV +LE
Subjt:  GDEALIAIGKGCSLHQLNVSGCHHISDKGIAAIARGCPKLSYLDVCMLE
A0A6J1KVN5 LOW QUALITY PROTEIN: F-box/LRR-repeat protein 4-like1.3e-1585.71Show/hide
Query:  GDEALIAIGKGCSLHQLNVSGCHHISDKGIAAIARGCPKLSYLDVCMLE
        GDEALIAIGKGCSLHQLNVSGCH I D GIAAIARGCP+LS+LDV +LE
Subjt:  GDEALIAIGKGCSLHQLNVSGCHHISDKGIAAIARGCPKLSYLDVCMLE
SwissProt top hitse value%identityAlignment
Q9C5D2 F-box/LRR-repeat protein 41.4e-1471.43Show/hide
Query:  GDEALIAIGKGCSLHQLNVSGCHHISDKGIAAIARGCPKLSYLDVCMLE
        G++ALIAIGKGCSL QLNVSGC+ ISD GI AIARGCP+L++LD+ +L+
Subjt:  GDEALIAIGKGCSLHQLNVSGCHHISDKGIAAIARGCPKLSYLDVCMLE
Q9LPL4 F-box protein SKP2A8.3e-0445.65Show/hide
Query:  DEALIAIGKGC-SLHQLNVSGCHHISDKGIAAIARGCPKLSYLDVC
        D +L A+  GC  L +LN+SGC   SD  IA + R C KL  L++C
Subjt:  DEALIAIGKGC-SLHQLNVSGCHHISDKGIAAIARGCPKLSYLDVC
Arabidopsis top hitse value%identityAlignment
AT1G21410.1 F-box/RNI-like superfamily protein5.9e-0545.65Show/hide
Query:  DEALIAIGKGC-SLHQLNVSGCHHISDKGIAAIARGCPKLSYLDVC
        D +L A+  GC  L +LN+SGC   SD  IA + R C KL  L++C
Subjt:  DEALIAIGKGC-SLHQLNVSGCHHISDKGIAAIARGCPKLSYLDVC
AT1G77000.1 RNI-like superfamily protein7.7e-0541.3Show/hide
Query:  DEALIAIGKGC-SLHQLNVSGCHHISDKGIAAIARGCPKLSYLDVC
        D +L ++ +GC +L +LN+SGC   SD  +A + R C KL  L++C
Subjt:  DEALIAIGKGC-SLHQLNVSGCHHISDKGIAAIARGCPKLSYLDVC
AT1G77000.2 RNI-like superfamily protein7.7e-0541.3Show/hide
Query:  DEALIAIGKGC-SLHQLNVSGCHHISDKGIAAIARGCPKLSYLDVC
        D +L ++ +GC +L +LN+SGC   SD  +A + R C KL  L++C
Subjt:  DEALIAIGKGC-SLHQLNVSGCHHISDKGIAAIARGCPKLSYLDVC
AT2G25490.1 EIN3-binding F box protein 17.7e-0544.19Show/hide
Query:  DEALIAIGKGCS-LHQLNVSGCHHISDKGIAAIARGCPKLSYL
        D  L+ I +GC+ L +L ++ C  I+DKG+ AIA+ CP L+ L
Subjt:  DEALIAIGKGCS-LHQLNVSGCHHISDKGIAAIARGCPKLSYL
AT4G15475.1 F-box/RNI-like superfamily protein9.7e-1671.43Show/hide
Query:  GDEALIAIGKGCSLHQLNVSGCHHISDKGIAAIARGCPKLSYLDVCMLE
        G++ALIAIGKGCSL QLNVSGC+ ISD GI AIARGCP+L++LD+ +L+
Subjt:  GDEALIAIGKGCSLHQLNVSGCHHISDKGIAAIARGCPKLSYLDVCMLE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGGCGATGAGGCACTTATTGCCATTGGTAAGGGTTGTTCCCTTCATCAGCTGAATGTTAGTGGGTGCCATCATATCAGTGATAAGGGAATTGCAGCCATTGCTAG
AGGTTGTCCCAAATTGAGTTACCTGGATGTATGCATGCTTGAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTGGCGATGAGGCACTTATTGCCATTGGTAAGGGTTGTTCCCTTCATCAGCTGAATGTTAGTGGGTGCCATCATATCAGTGATAAGGGAATTGCAGCCATTGCTAG
AGGTTGTCCCAAATTGAGTTACCTGGATGTATGCATGCTTGAG
Protein sequenceShow/hide protein sequence
MGGDEALIAIGKGCSLHQLNVSGCHHISDKGIAAIARGCPKLSYLDVCMLE