CuGenDBv2

Gene ID	Chy11G193540
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Plant transposase
Genome location	chrH11:10810594..10825045
RNA-Seq Expression	Chy11G193540
Synteny	Chy11G193540
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0038369.1 uncharacterized protein E6C27_scaffold270G002520 [Cucumis melo var. makuwa]

3.41e-30

73.49

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Query:  PDRGHVRGFGFGVTRSKLSLLSQQDHTYKVLEK*YLKMK*EIIEMKAMKDEMIEIKALLS*YLKKHVEPSEKLSKVLQVCLSK
        PDRGHVRGFGFG+TRSKLSLLSQQDH YKVLEK YLKMK E++EMK MKDEMIE+KAL+  YLKK  EPSE+LS      L +
Subjt:  PDRGHVRGFGFGVTRSKLSLLSQQDHTYKVLEK*YLKMK*EIIEMKAMKDEMIEIKALLS*YLKKHVEPSEKLSKVLQVCLSK

KAA0038435.1 Plant transposase [Cucumis melo var. makuwa]

2.24e-27

81.94

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Query:  PDRGHVRGFGFGVTRSKLSLLSQQDHTYKVLEK*YLKMK*EIIEMKAMKDEMIEIKALLS*YLKKHVEPSEK
        PDRGHVRGFGFGVTRSKLSLLSQQDH YKVLEK YLKMK E++EMK MKDEMIE+KAL+  YLKK  EPSE+
Subjt:  PDRGHVRGFGFGVTRSKLSLLSQQDHTYKVLEK*YLKMK*EIIEMKAMKDEMIEIKALLS*YLKKHVEPSEK

KAA0066537.1 Plant transposase [Cucumis melo var. makuwa]

7.09e-29

74.7

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Query:  PDRGHVRGFGFGVTRSKLSLLSQQDHTYKVLEK*YLKMK*EIIEMKAMKDEMIEIKALLS*YLKKHVEPSEKLSKVLQVCLSK
        PDRGHVRGFGFGVTRSKLSLLSQQDH YKVLEK YLKMK E++EMK MKDEMIE+KAL+  YLKK  EPSE+LS      L +
Subjt:  PDRGHVRGFGFGVTRSKLSLLSQQDHTYKVLEK*YLKMK*EIIEMKAMKDEMIEIKALLS*YLKKHVEPSEKLSKVLQVCLSK

TYJ95916.1 Plant transposase [Cucumis melo var. makuwa]

4.25e-29

73.49

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Query:  PDRGHVRGFGFGVTRSKLSLLSQQDHTYKVLEK*YLKMK*EIIEMKAMKDEMIEIKALLS*YLKKHVEPSEKLSKVLQVCLSK
        PD GHVRGFGFGVTRSKLSLLSQQDH YKVLEK YLKMK E++EMK MKDEMIE+KAL+  YLKK  EPSE+LS      L +
Subjt:  PDRGHVRGFGFGVTRSKLSLLSQQDHTYKVLEK*YLKMK*EIIEMKAMKDEMIEIKALLS*YLKKHVEPSEKLSKVLQVCLSK

TYK25923.1 Plant transposase [Cucumis melo var. makuwa]

7.09e-29

74.7

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Query:  PDRGHVRGFGFGVTRSKLSLLSQQDHTYKVLEK*YLKMK*EIIEMKAMKDEMIEIKALLS*YLKKHVEPSEKLSKVLQVCLSK
        PDRGHVRGFGFGVTRSKLSLLSQQDH YKVLEK YLKMK E++EMK MKDEMIE+KAL+  YLKK  EPSE+LS      L +
Subjt:  PDRGHVRGFGFGVTRSKLSLLSQQDHTYKVLEK*YLKMK*EIIEMKAMKDEMIEIKALLS*YLKKHVEPSEKLSKVLQVCLSK

TrEMBL top hits

e value

%identity

Alignment

A0A5A7UH86 Putative TNP1-like transposon protein

1.1e-24

74.7

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Query:  PDRGHVRGFGFGVTRSKLSLLSQQDHTYKVLEK*YLKMK*EIIEMKAMKDEMIEIKALLS*YLKKHVEPSEKLSKVLQVCLSK
        PDRGHVRGFGFGVTRSKLSLLSQQDH YKVLEK YLKMK E++EMK MKDEMIE+KAL+  YLKK  EPSE+LS      L +
Subjt:  PDRGHVRGFGFGVTRSKLSLLSQQDHTYKVLEK*YLKMK*EIIEMKAMKDEMIEIKALLS*YLKKHVEPSEKLSKVLQVCLSK

A0A5A7VHH9 Plant transposase

1.1e-24

74.7

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Query:  PDRGHVRGFGFGVTRSKLSLLSQQDHTYKVLEK*YLKMK*EIIEMKAMKDEMIEIKALLS*YLKKHVEPSEKLSKVLQVCLSK
        PDRGHVRGFGFGVTRSKLSLLSQQDH YKVLEK YLKMK E++EMK MKDEMIE+KAL+  YLKK  EPSE+LS      L +
Subjt:  PDRGHVRGFGFGVTRSKLSLLSQQDHTYKVLEK*YLKMK*EIIEMKAMKDEMIEIKALLS*YLKKHVEPSEKLSKVLQVCLSK

A0A5D3BCJ8 Uncharacterized protein

2.4e-24

73.49

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Query:  PDRGHVRGFGFGVTRSKLSLLSQQDHTYKVLEK*YLKMK*EIIEMKAMKDEMIEIKALLS*YLKKHVEPSEKLSKVLQVCLSK
        PDRGHVRGFGFG+TRSKLSLLSQQDH YKVLEK YLKMK E++EMK MKDEMIE+KAL+  YLKK  EPSE+LS      L +
Subjt:  PDRGHVRGFGFGVTRSKLSLLSQQDHTYKVLEK*YLKMK*EIIEMKAMKDEMIEIKALLS*YLKKHVEPSEKLSKVLQVCLSK

A0A5D3CNY4 Putative TNP1-like transposon protein

1.1e-24

74.7

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Query:  PDRGHVRGFGFGVTRSKLSLLSQQDHTYKVLEK*YLKMK*EIIEMKAMKDEMIEIKALLS*YLKKHVEPSEKLSKVLQVCLSK
        PDRGHVRGFGFGVTRSKLSLLSQQDH YKVLEK YLKMK E++EMK MKDEMIE+KAL+  YLKK  EPSE+LS      L +
Subjt:  PDRGHVRGFGFGVTRSKLSLLSQQDHTYKVLEK*YLKMK*EIIEMKAMKDEMIEIKALLS*YLKKHVEPSEKLSKVLQVCLSK

A0A5D3DQI7 Plant transposase

1.1e-24

74.7

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Query:  PDRGHVRGFGFGVTRSKLSLLSQQDHTYKVLEK*YLKMK*EIIEMKAMKDEMIEIKALLS*YLKKHVEPSEKLSKVLQVCLSK
        PDRGHVRGFGFGVTRSKLSLLSQQDH YKVLEK YLKMK E++EMK MKDEMIE+KAL+  YLKK  EPSE+LS      L +
Subjt:  PDRGHVRGFGFGVTRSKLSLLSQQDHTYKVLEK*YLKMK*EIIEMKAMKDEMIEIKALLS*YLKKHVEPSEKLSKVLQVCLSK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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CTACAACTTCTACATGAATAAACCCAAGTGATAGGAGTCGACAATTCGAGAAAGGACTTAGACAAAAAATTCAGACTCTGGAAACAAGAAAAGAAAAAAAGATTCGGAAG
CATGTTTCGATCTTAAAACTCAGGAAGAGTGCATTGAACAAACTGAGGCTGAGACGACAATTTCAACTAACATAGTTGATGATGCTTTCCTGACCGTGGTCATGTAAGAG
GATTTGGGTTTGGTGTGACTCGTTCAAAACTATCTCTTTTGTCTCAACAAGATCATACGTATAAGGTTCTTGAAAAATAATATTTGAAGATGAAGTAGGAAATTATAGAA
ATGAAAGCAATGAAAGATGAAATGATAGAAATAAAAGCACTTCTGTCATGATATTTAAAGAAACATGTTGAACCAAGTGAGAAACTTTCAAAGGTACTGCAAGTGTGCTT
AAGCAAAAAAATATTTCTCCAACTTGTCCAATAGTATCAATAATAACAGTCAAATTAAGTGCAAGTTATTAGATTTGTACGGCTCGTGAGAGATTGTTGCCGAAGGAAGA
TGGTCTTCTAATGATCCAACTGCTTTGGTTCATTATGTTCCTATTGGTCCACAAGCAGTTAGAGTATGAGTTGATGTAGCAACGAAACCAAACTCACATTTGTGGAGGCC
AACATGAGAAATGACATGTATTGAAGAAGCTTTGGAAAGTACACTTGCATGACTATGTGATAAAGTGAATCAAATGGCATCTTAACCAAAGGAAAGAAGAACCAACGACT
TATGGTGAATTTTGTTAGTATTTTGAGGGTTAATTTGTGTTGTTGGTACATTTACTAAGTACTTTTAAATTATTGAATACTTTGTTTTGTAATTCTAATACATTATGAAT
GGAAGTTATTATAGTATTTAATAAAAAT

mRNA sequence

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Protein sequence

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LQLLHETQVIGVDNSRKDLDKKFRLWKQEKKKRFGSMFRS*NSGRVH*TN*G*DDNFN*HS*CFPDRGHVRGFGFGVTRSKLSLLSQQDHTYKVLEK*YLKMK*EIIEMK
AMKDEMIEIKALLSYLKKHVEPSEKLSKVLQVCLSKKIFLQLVQ*YQ**QSN*VQVIRFVRLVRDCCRRKMVF*SNCFGSLCSYWSTSS*SMS*CSNETKLTFVEANMRN
DMY*RSFGKYTCMTM*SESNGILTKGKKNQRLMVNFVSILRVNLCCWYIY*VLLNY*ILCFVILIHYEWKLL*YLIKX

Chy11G193540 (gene) of Cucumber (hystrix) v1 genome