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Chy11G193770 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy11G193770
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionDUF4216 domain-containing protein
Genome locationchrH11:11393217..11393980
RNA-Seq ExpressionChy11G193770
SyntenyChy11G193770
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031903.1 putative TNP1-like transposon protein [Cucumis melo var. makuwa]3.88e-3270.41Show/hide
Query:  SLEKSTQNSVVAVNATTLCRSSAKDKPQVMDVVAYYG-------------------CDWTNVRNGVKVEEGFTLVNLHQSQNKFVQELFIFASQAKQV
        S+EKSTQN+ VAV+ATTLCRSSAKDK QVMDVVAYYG                   CDW NVRNGVKVEEGFTLVNLHQSQ+KFV+E FI ASQAKQV
Subjt:  SLEKSTQNSVVAVNATTLCRSSAKDKPQVMDVVAYYG-------------------CDWTNVRNGVKVEEGFTLVNLHQSQNKFVQELFIFASQAKQV

KAA0040964.1 putative TNP1-like transposon protein [Cucumis melo var. makuwa]2.81e-3170.41Show/hide
Query:  SLEKSTQNSVVAVNATTLCRSSAKDKPQVMDVVAYYG-------------------CDWTNVRNGVKVEEGFTLVNLHQSQNKFVQELFIFASQAKQV
        S+EKSTQN+ VAV+ATTLCRSSAKDK QVMDVVAYYG                   CDW NVRNGVKVEEGFTLVNLHQSQ+KFV+E FI ASQAKQV
Subjt:  SLEKSTQNSVVAVNATTLCRSSAKDKPQVMDVVAYYG-------------------CDWTNVRNGVKVEEGFTLVNLHQSQNKFVQELFIFASQAKQV

KAA0041467.1 uncharacterized protein E6C27_scaffold6G00470 [Cucumis melo var. makuwa]1.21e-3266.33Show/hide
Query:  SLEKSTQNSVVAVNATTLCRSSAKDKPQVMDVVAYYG-------------------CDWTNVRNGVKVEEGFTLVNLHQSQNKFVQELFIFASQAKQV
        S+EKSTQN+ VA++ATTLCRSSAKDK QVMD+VAYYG                   CDW NV NGV+VEEGFTLVNLHQSQ+KFV+E FI ASQAKQV
Subjt:  SLEKSTQNSVVAVNATTLCRSSAKDKPQVMDVVAYYG-------------------CDWTNVRNGVKVEEGFTLVNLHQSQNKFVQELFIFASQAKQV

KAA0051595.1 hypothetical protein E6C27_scaffold174G001390 [Cucumis melo var. makuwa]5.89e-3365.42Show/hide
Query:  LEKSTQNSVVAVNATTLCRSSAKDKPQVMDVVAYYG-------------------CDWTNVRNGVKVEEGFTLVNLHQSQNKFVQELFIFASQAKQVEME
        +EKSTQNS VAV+ATTLCRSSAKDK QVMDVVAYYG                   CDW NVRNGVKVEEGF LVNLHQSQ+KFV+E FI ASQAKQV   
Subjt:  LEKSTQNSVVAVNATTLCRSSAKDKPQVMDVVAYYG-------------------CDWTNVRNGVKVEEGFTLVNLHQSQNKFVQELFIFASQAKQVEME

Query:  RGLQDTI
        R    +I
Subjt:  RGLQDTI

KAA0060272.1 uncharacterized protein E6C27_scaffold22G00390 [Cucumis melo var. makuwa]2.56e-3269.39Show/hide
Query:  SLEKSTQNSVVAVNATTLCRSSAKDKPQVMDVVAYYG-------------------CDWTNVRNGVKVEEGFTLVNLHQSQNKFVQELFIFASQAKQV
        S+EKSTQN+ VAV+ATTLCRSS KDK QVMDVVAYYG                   CDW NVRNGVKVEEGFTLVNLHQSQ+KFV+E FI ASQAKQV
Subjt:  SLEKSTQNSVVAVNATTLCRSSAKDKPQVMDVVAYYG-------------------CDWTNVRNGVKVEEGFTLVNLHQSQNKFVQELFIFASQAKQV

TrEMBL top hitse value%identityAlignment
A0A5A7T672 Uncharacterized protein6.5e-2670.41Show/hide
Query:  SLEKSTQNSVVAVNATTLCRSSAKDKPQVMDVVAYYG-------------------CDWTNVRNGVKVEEGFTLVNLHQSQNKFVQELFIFASQAKQV
        S+EKSTQN+ VAV+ATTLCRSSAKDK QVMDVVAYYG                   CDW NVRNGVKVEEGFTLVNLHQSQ+KFV+E FI ASQAKQV
Subjt:  SLEKSTQNSVVAVNATTLCRSSAKDKPQVMDVVAYYG-------------------CDWTNVRNGVKVEEGFTLVNLHQSQNKFVQELFIFASQAKQV

A0A5A7TBX7 Putative TNP1-like transposon protein3.8e-2670.41Show/hide
Query:  SLEKSTQNSVVAVNATTLCRSSAKDKPQVMDVVAYYG-------------------CDWTNVRNGVKVEEGFTLVNLHQSQNKFVQELFIFASQAKQV
        S+EKSTQN+ VAV+ATTLCRSSAKDK QVMDVVAYYG                   CDW NVRNGVKVEEGFTLVNLHQSQ+KFV+E FI ASQAKQV
Subjt:  SLEKSTQNSVVAVNATTLCRSSAKDKPQVMDVVAYYG-------------------CDWTNVRNGVKVEEGFTLVNLHQSQNKFVQELFIFASQAKQV

A0A5A7UM47 Integrase6.5e-2670.41Show/hide
Query:  SLEKSTQNSVVAVNATTLCRSSAKDKPQVMDVVAYYG-------------------CDWTNVRNGVKVEEGFTLVNLHQSQNKFVQELFIFASQAKQV
        S+EKSTQN+ VAV+ATTLCRSSAKDK QVMDVVAYYG                   CDW NVRNGVKVEEGFTLVNLHQSQ+KFV+E FI ASQAKQV
Subjt:  SLEKSTQNSVVAVNATTLCRSSAKDKPQVMDVVAYYG-------------------CDWTNVRNGVKVEEGFTLVNLHQSQNKFVQELFIFASQAKQV

A0A5D3DCM2 Uncharacterized protein6.5e-2670.41Show/hide
Query:  SLEKSTQNSVVAVNATTLCRSSAKDKPQVMDVVAYYG-------------------CDWTNVRNGVKVEEGFTLVNLHQSQNKFVQELFIFASQAKQV
        S+EKSTQN+ VAV+ATTLCRSSAKDK QVMDVVAYYG                   CDW NVRNGVKVEEGFTLVNLHQSQ+KFV+E FI ASQAKQV
Subjt:  SLEKSTQNSVVAVNATTLCRSSAKDKPQVMDVVAYYG-------------------CDWTNVRNGVKVEEGFTLVNLHQSQNKFVQELFIFASQAKQV

A0A5D3DLF1 Uncharacterized protein6.5e-2670.41Show/hide
Query:  SLEKSTQNSVVAVNATTLCRSSAKDKPQVMDVVAYYG-------------------CDWTNVRNGVKVEEGFTLVNLHQSQNKFVQELFIFASQAKQV
        S+EKSTQN+ VAV+ATTLCRSSAKDK QVMDVVAYYG                   CDW NVRNGVKVEEGFTLVNLHQSQ+KFV+E FI ASQAKQV
Subjt:  SLEKSTQNSVVAVNATTLCRSSAKDKPQVMDVVAYYG-------------------CDWTNVRNGVKVEEGFTLVNLHQSQNKFVQELFIFASQAKQV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGTCTTGAAAAATCAACTCAAAATAGTGTTGTTGCTGTAAATGCTACAACATTATGTAGATCTAGTGCCAAAGATAAACCTCAAGTTATGGATGTAGTTGCTTATTATGG
ATGTGATTGGACAAATGTTCGCAATGGAGTAAAAGTTGAGGAAGGATTCACTCTTGTTAACTTACATCAAAGTCAAAACAAGTTTGTACAAGAGCTTTTCATATTTGCCT
CGCAAGCCAAACAAGTTGAAATGGAGAGAGGTTTACAAGATACCATCGAACTATGA
mRNA sequenceShow/hide mRNA sequence
AGTCTTGAAAAATCAACTCAAAATAGTGTTGTTGCTGTAAATGCTACAACATTATGTAGATCTAGTGCCAAAGATAAACCTCAAGTTATGGATGTAGTTGCTTATTATGG
ATGTGATTGGACAAATGTTCGCAATGGAGTAAAAGTTGAGGAAGGATTCACTCTTGTTAACTTACATCAAAGTCAAAACAAGTTTGTACAAGAGCTTTTCATATTTGCCT
CGCAAGCCAAACAAGTTGAAATGGAGAGAGGTTTACAAGATACCATCGAACTATGA
Protein sequenceShow/hide protein sequence
SLEKSTQNSVVAVNATTLCRSSAKDKPQVMDVVAYYGCDWTNVRNGVKVEEGFTLVNLHQSQNKFVQELFIFASQAKQVEMERGLQDTIEL