; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy11G193790 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy11G193790
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionS-protein homolog
Genome locationchrH11:11473283..11477421
RNA-Seq ExpressionChy11G193790
SyntenyChy11G193790
Gene Ontology termsNA
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052584.1 pumilio-like protein 15-like [Cucumis melo var. makuwa]8.39e-2551.06Show/hide
Query:  GSKYEHPLSKWKVGISNEMVGPNQTLTIHCKSKDDDLGERNLNVGKSFEWEFKENLIPTTLSWCTFNTHPLNYHAVFQVFWREKREWLASRCNF
        GSK   P S WKV + N++  P Q+LT+HCKSKD+DLGE +L VG+ F W+FKENL  TT  WC+  T          VFW E+ +WLA RCN+
Subjt:  GSKYEHPLSKWKVGISNEMVGPNQTLTIHCKSKDDDLGERNLNVGKSFEWEFKENLIPTTLSWCTFNTHPLNYHAVFQVFWREKREWLASRCNF

KAE8647731.1 hypothetical protein Csa_003821 [Cucumis sativus]1.64e-2350Show/hide
Query:  GSKYEHPLSKWKVGISNEMVGPNQTLTIHCKSKDDDLGERNLNVGKSFEWEFKENLIPTTLSWCTFNTHPLNYHAVFQVFWREKREWLASRCNF
        GSK   PLS+WKV I +++  P + L +HCKSKD+DLGE +L V ++F W+FKENL  TTL WCT  T          VFW E+  WLA RC++
Subjt:  GSKYEHPLSKWKVGISNEMVGPNQTLTIHCKSKDDDLGERNLNVGKSFEWEFKENLIPTTLSWCTFNTHPLNYHAVFQVFWREKREWLASRCNF

KAE8648119.1 hypothetical protein Csa_004728 [Cucumis sativus]5.92e-2855.1Show/hide
Query:  SLEEGSKYEHPLSKWKVGISNEMVGPNQTLTIHCKSKDDDLGERNLNVGKSFEWEFKENLIPTTLSWCTFNTHPLNYHAVFQVFWREKREWLASRCNF
        +L   SKY   LSKW V I N++   NQ L +HCKSKDD+LG+  +  G+S+EW+F+EN   TTL WCT  T P N H  F+V+WREK EWL SRCNF
Subjt:  SLEEGSKYEHPLSKWKVGISNEMVGPNQTLTIHCKSKDDDLGERNLNVGKSFEWEFKENLIPTTLSWCTFNTHPLNYHAVFQVFWREKREWLASRCNF

KAG7034676.1 S-protein-like 1, partial [Cucurbita argyrosperma subsp. argyrosperma]2.95e-2756.25Show/hide
Query:  LEEGSKYEHPLSKWKVGISNEMVGPNQTLTIHCKSKDDDLGERNLNVGKSFEWEFKENLIPTTLSWCTFNTHPLNYHAVFQVFWREKREWLASRCN
        +  GSK   PLS+WKV I N++  P QTL  HCKSK+DDLG+  L VG+ + WEFKEN+I TT  WCTF T  LN   V  VFW E   WLA RCN
Subjt:  LEEGSKYEHPLSKWKVGISNEMVGPNQTLTIHCKSKDDDLGERNLNVGKSFEWEFKENLIPTTLSWCTFNTHPLNYHAVFQVFWREKREWLASRCN

XP_004136434.3 S-protein homolog 1-like [Cucumis sativus]3.18e-2356.18Show/hide
Query:  EHPLSKWKVGISNEMVGPNQTLTIHCKSKDDDLGERNLNVGKSFEWEFKENLIPTTLSWCTFNTHPLNYHAVFQVFWREKREWLASRCN
        E PLS WK+ I NEM     TL + CKSKDDDLG +NL V + F W FKENL  TTL WC    H    HA F VFW EK  WLA RC 
Subjt:  EHPLSKWKVGISNEMVGPNQTLTIHCKSKDDDLGERNLNVGKSFEWEFKENLIPTTLSWCTFNTHPLNYHAVFQVFWREKREWLASRCN

TrEMBL top hitse value%identityAlignment
A0A314XJ22 S-protein homolog3.7e-1752.17Show/hide
Query:  HPLSKWKVGISNEMVGPNQTLTIHCKSKDDDLGERNLNVGKSFEWEFKENLIPTTLSWCTFNTHPLNYHAVFQVFWRE---KREWLASRCNF
        +P++KW V + N+M G ++TL  HCKSKDDDLG R++  G  F W FKEN   TTL WC  N H  + HA FQVFW E   K  WL  RCN+
Subjt:  HPLSKWKVGISNEMVGPNQTLTIHCKSKDDDLGERNLNVGKSFEWEFKENLIPTTLSWCTFNTHPLNYHAVFQVFWRE---KREWLASRCNF

A0A314ZNN4 S-protein homolog3.7e-1752.17Show/hide
Query:  HPLSKWKVGISNEMVGPNQTLTIHCKSKDDDLGERNLNVGKSFEWEFKENLIPTTLSWCTFNTHPLNYHAVFQVFWRE---KREWLASRCNF
        +P++KW V + N+M G ++TL  HCKSKDDDLG R++  G  F W FKEN   TTL WC  N H  + HA FQVFW E   K  WL  RCN+
Subjt:  HPLSKWKVGISNEMVGPNQTLTIHCKSKDDDLGERNLNVGKSFEWEFKENLIPTTLSWCTFNTHPLNYHAVFQVFWRE---KREWLASRCNF

A0A5A7UB41 S-protein homolog1.3e-1951.06Show/hide
Query:  GSKYEHPLSKWKVGISNEMVGPNQTLTIHCKSKDDDLGERNLNVGKSFEWEFKENLIPTTLSWCTFNTHPLNYHAVFQVFWREKREWLASRCNF
        GSK   P S WKV + N++  P Q+LT+HCKSKD+DLGE +L VG+ F W+FKENL  TT  WC+  T          VFW E+ +WLA RCN+
Subjt:  GSKYEHPLSKWKVGISNEMVGPNQTLTIHCKSKDDDLGERNLNVGKSFEWEFKENLIPTTLSWCTFNTHPLNYHAVFQVFWREKREWLASRCNF

A0A5E4EKH7 S-protein homolog3.7e-1752.17Show/hide
Query:  HPLSKWKVGISNEMVGPNQTLTIHCKSKDDDLGERNLNVGKSFEWEFKENLIPTTLSWCTFNTHPLNYHAVFQVFWRE---KREWLASRCNF
        +P++KW V + N+M G ++TL  HCKSKDDDLG R++  G  F W FKEN   TTL WC  N H  + HA FQVFW E   K  WL  RCN+
Subjt:  HPLSKWKVGISNEMVGPNQTLTIHCKSKDDDLGERNLNVGKSFEWEFKENLIPTTLSWCTFNTHPLNYHAVFQVFWRE---KREWLASRCNF

A0A6P5RY64 S-protein homolog3.7e-1752.17Show/hide
Query:  HPLSKWKVGISNEMVGPNQTLTIHCKSKDDDLGERNLNVGKSFEWEFKENLIPTTLSWCTFNTHPLNYHAVFQVFWRE---KREWLASRCNF
        +P++KW V + N+M G ++TL  HCKSKDDDLG R++  G  F W FKEN   TTL WC  N H  + HA FQVFW E   K  WL  RCN+
Subjt:  HPLSKWKVGISNEMVGPNQTLTIHCKSKDDDLGERNLNVGKSFEWEFKENLIPTTLSWCTFNTHPLNYHAVFQVFWRE---KREWLASRCNF

SwissProt top hitse value%identityAlignment
F4JLQ5 S-protein homolog 27.4e-0745.9Show/hide
Query:  PLSKWKVGISNEMVGPNQTLTIHCKSKDDDLGERNLNVGKSFEWEFKENLIPTTLSWCTFN
        P SK  V I+N++ G   TL  HCKSKDDDLG R L  G+S+ + F       TL +C+F+
Subjt:  PLSKWKVGISNEMVGPNQTLTIHCKSKDDDLGERNLNVGKSFEWEFKENLIPTTLSWCTFN

F4JLS0 S-protein homolog 16.5e-1144.59Show/hide
Query:  LSKWKVGISNEMVGPNQTLTIHCKSKDDDLGERNLNVGKSFEWEFKENLIPTTLSWCTFNTHPLNYHAVFQVFW
        +S+W+V + N +    +TL IHCKSK+DDLGE NL     F W F EN++ +T  WC  N    N H    VFW
Subjt:  LSKWKVGISNEMVGPNQTLTIHCKSKDDDLGERNLNVGKSFEWEFKENLIPTTLSWCTFNTHPLNYHAVFQVFW

P0DN93 S-protein homolog 291.9e-0745.9Show/hide
Query:  HPLSKWKVGISNEMVGPNQTLTIHCKSKDDDLGERNLNVGKSFEWEFKENLIPTTLSWCTF
        +P +K  V ++N  + P  TLTI C+SKDDDLGE  L  G++F W+F+ +   TTL  C F
Subjt:  HPLSKWKVGISNEMVGPNQTLTIHCKSKDDDLGERNLNVGKSFEWEFKENLIPTTLSWCTF

Q2HQ46 S-protein homolog 742.1e-0940.54Show/hide
Query:  LSKWKVGISNEMVGPNQTLTIHCKSKDDDLGERNLNVGKSFEWEFKENLIPTTLSWCTFNTHPLNYHAVFQVFW
        +S+W+V ++N +    +TL IHCKSK++DLG+ NL     F W F EN++ +TL WC  +    + H   +VFW
Subjt:  LSKWKVGISNEMVGPNQTLTIHCKSKDDDLGERNLNVGKSFEWEFKENLIPTTLSWCTFNTHPLNYHAVFQVFW

Q9FI83 S-protein homolog 281.4e-0536.23Show/hide
Query:  LTIHCKSKDDDLGERNLNVGKSFEWEFKENLIPTTLSWCTFNTHPLNYHAVFQVFWREKREWLASRCNF
        L IHCKS+DDDLG   L  G+ F W+F  N   +TL +C F+   +N   VF ++   +  +  + C +
Subjt:  LTIHCKSKDDDLGERNLNVGKSFEWEFKENLIPTTLSWCTFNTHPLNYHAVFQVFWREKREWLASRCNF

Arabidopsis top hitse value%identityAlignment
AT4G16195.1 Plant self-incompatibility protein S1 family5.3e-0845.9Show/hide
Query:  PLSKWKVGISNEMVGPNQTLTIHCKSKDDDLGERNLNVGKSFEWEFKENLIPTTLSWCTFN
        P SK  V I+N++ G   TL  HCKSKDDDLG R L  G+S+ + F       TL +C+F+
Subjt:  PLSKWKVGISNEMVGPNQTLTIHCKSKDDDLGERNLNVGKSFEWEFKENLIPTTLSWCTFN

AT4G16295.1 S-protein homologue 14.6e-1244.59Show/hide
Query:  LSKWKVGISNEMVGPNQTLTIHCKSKDDDLGERNLNVGKSFEWEFKENLIPTTLSWCTFNTHPLNYHAVFQVFW
        +S+W+V + N +    +TL IHCKSK+DDLGE NL     F W F EN++ +T  WC  N    N H    VFW
Subjt:  LSKWKVGISNEMVGPNQTLTIHCKSKDDDLGERNLNVGKSFEWEFKENLIPTTLSWCTFNTHPLNYHAVFQVFW

AT4G29035.1 Plant self-incompatibility protein S1 family1.5e-1040.54Show/hide
Query:  LSKWKVGISNEMVGPNQTLTIHCKSKDDDLGERNLNVGKSFEWEFKENLIPTTLSWCTFNTHPLNYHAVFQVFW
        +S+W+V ++N +    +TL IHCKSK++DLG+ NL     F W F EN++ +TL WC  +    + H   +VFW
Subjt:  LSKWKVGISNEMVGPNQTLTIHCKSKDDDLGERNLNVGKSFEWEFKENLIPTTLSWCTFNTHPLNYHAVFQVFW

AT5G04350.1 Plant self-incompatibility protein S1 family2.4e-0832.22Show/hide
Query:  HPLSKWKVGISNEMVGPNQTLTIHCKSKDDDLGERNLNVGKSFEWEFKENLIPTTLSWCTFNTHP-LNYHAVFQVFWREKREWLASRCNF
        H + + KV +SN++   ++ L +HC+SKDDDLGE  L +G+ +E+ F +N+  TT   C  +  P   +H  F  +     + L + C +
Subjt:  HPLSKWKVGISNEMVGPNQTLTIHCKSKDDDLGERNLNVGKSFEWEFKENLIPTTLSWCTFNTHP-LNYHAVFQVFWREKREWLASRCNF

AT5G06030.1 Plant self-incompatibility protein S1 family9.9e-0736.23Show/hide
Query:  LTIHCKSKDDDLGERNLNVGKSFEWEFKENLIPTTLSWCTFNTHPLNYHAVFQVFWREKREWLASRCNF
        L IHCKS+DDDLG   L  G+ F W+F  N   +TL +C F+   +N   VF ++   +  +  + C +
Subjt:  LTIHCKSKDDDLGERNLNVGKSFEWEFKENLIPTTLSWCTFNTHPLNYHAVFQVFWREKREWLASRCNF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGACCGTTCACACTTACATCGTCGCATCACTAATAGCCTTCACTGGTCGTTGTATCTTTGTCGTCGTCATTAGTCAGAGTCGAAACGTCCCCATTAATCACGATTT
TGGCATCCATTCGTCGTTGAGAATCCATTCGCTCAAGATCTGTCTCTGTCCACTAAGCCCAGCTATTTTCCATTATTGTATTGATAATGTTAGCAATAGGTGGACCACGC
CATGTACATCAGCTTCTTTTTCATTGGAAGAAGGTTCAAAATACGAGCATCCGTTGAGTAAATGGAAAGTTGGGATTTCTAATGAAATGGTAGGTCCAAACCAAACACTA
ACAATTCATTGCAAATCAAAAGACGATGATTTGGGTGAACGCAATCTCAATGTTGGAAAGAGTTTTGAATGGGAATTCAAGGAGAATTTGATACCAACCACTCTGAGTTG
GTGCACCTTCAACACTCATCCTTTGAATTATCATGCTGTTTTTCAAGTGTTTTGGAGAGAAAAGAGAGAATGGCTTGCTTCAAGGTGCAATTTCAG
mRNA sequenceShow/hide mRNA sequence
ATGTCGACCGTTCACACTTACATCGTCGCATCACTAATAGCCTTCACTGGTCGTTGTATCTTTGTCGTCGTCATTAGTCAGAGTCGAAACGTCCCCATTAATCACGATTT
TGGCATCCATTCGTCGTTGAGAATCCATTCGCTCAAGATCTGTCTCTGTCCACTAAGCCCAGCTATTTTCCATTATTGTATTGATAATGTTAGCAATAGGTGGACCACGC
CATGTACATCAGCTTCTTTTTCATTGGAAGAAGGTTCAAAATACGAGCATCCGTTGAGTAAATGGAAAGTTGGGATTTCTAATGAAATGGTAGGTCCAAACCAAACACTA
ACAATTCATTGCAAATCAAAAGACGATGATTTGGGTGAACGCAATCTCAATGTTGGAAAGAGTTTTGAATGGGAATTCAAGGAGAATTTGATACCAACCACTCTGAGTTG
GTGCACCTTCAACACTCATCCTTTGAATTATCATGCTGTTTTTCAAGTGTTTTGGAGAGAAAAGAGAGAATGGCTTGCTTCAAGGTGCAATTTCAG
Protein sequenceShow/hide protein sequence
MSTVHTYIVASLIAFTGRCIFVVVISQSRNVPINHDFGIHSSLRIHSLKICLCPLSPAIFHYCIDNVSNRWTTPCTSASFSLEEGSKYEHPLSKWKVGISNEMVGPNQTL
TIHCKSKDDDLGERNLNVGKSFEWEFKENLIPTTLSWCTFNTHPLNYHAVFQVFWREKREWLASRCNFX