; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy11G194330 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy11G194330
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionSerine/arginine repetitive matrix protein 1-like
Genome locationchrH11:11999986..12000645
RNA-Seq ExpressionChy11G194330
SyntenyChy11G194330
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR007592 - GLABROUS1 enhancer-binding protein family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037301.1 serine/arginine repetitive matrix protein 1-like [Cucumis melo var. makuwa]6.01e-10474.67Show/hide
Query:  MSTPHRSPPSSASPETLT------QSNNQIDQLHFTDEDEINLLNSYLQISRSENPTKNSLPTLDSPAFDRLQTAVGPKFSHSVIADKLHRLKLQYHKFA
        MSTPHRS PS+ASPETLT      Q NNQ DQLHFTDEDEINLL SYLQISRSENPTKNSLPTLDSPAFDRLQTAVGPKFSHSVIADKLHRLKL YHKFA
Subjt:  MSTPHRSPPSSASPETLT------QSNNQIDQLHFTDEDEINLLNSYLQISRSENPTKNSLPTLDSPAFDRLQTAVGPKFSHSVIADKLHRLKLQYHKFA

Query:  RTKSFIKTPHQRQILDLGRSIWGKSPTPITRKPQ------------------------------------------FPGNGVWRDGLRRMEEKNLKNMNE
        RTKSFIKTPHQRQILDLGRSIWGKSPTPITRKPQ                                          FPGNGVWR+GLRRMEEKNLK+MNE
Subjt:  RTKSFIKTPHQRQILDLGRSIWGKSPTPITRKPQ------------------------------------------FPGNGVWRDGLRRMEEKNLKNMNE

Query:  KWVLLHIEGAELKARRAALLKQQLR
        KWVLLHIEGAELKARRAALLKQQL+
Subjt:  KWVLLHIEGAELKARRAALLKQQLR

KAG6570827.1 hypothetical protein SDJN03_29742, partial [Cucurbita argyrosperma subsp. sororia]4.95e-7761.5Show/hide
Query:  MSTPHRSPPSSASPETLTQSNNQIDQLHFTDEDEINLLNSYLQISRSENPTKNSLPTLDSPAFDRLQTAVGPKFSHSVIADKLHRLKLQYHKFARTKSFI
        MSTPHR PPS+ASPETLT         HF++EDE+NLLN YLQI+RS NPT NS PTLDSPA DR++TA+ PKF++S IADKLHRLKLQYHK ARTKS I
Subjt:  MSTPHRSPPSSASPETLTQSNNQIDQLHFTDEDEINLLNSYLQISRSENPTKNSLPTLDSPAFDRLQTAVGPKFSHSVIADKLHRLKLQYHKFARTKSFI

Query:  KTPHQRQILDLGRSIWGKSPTPITRKPQ------------------------------------FPGNGVWRDGLRRMEEKNLKNMNEKWVLLHIEGAEL
        KTPH R+IL++GRSIWGK PT  T KPQ                                    FPGNGVW++GLR MEEK+L++MNEKWVLLHIE AEL
Subjt:  KTPHQRQILDLGRSIWGKSPTPITRKPQ------------------------------------FPGNGVWRDGLRRMEEKNLKNMNEKWVLLHIEGAEL

Query:  KARRAALLKQQLR
        KARRAALL++QLR
Subjt:  KARRAALLKQQLR

KAG6606028.1 hypothetical protein SDJN03_03345, partial [Cucurbita argyrosperma subsp. sororia]2.72e-6957.14Show/hide
Query:  MSTPHRSPPSS-------ASPETLTQSNNQIDQLHFTDEDEINLLNSYLQISRSENPTKNSLPTLDSPAFDRLQTAVGPKFSHSVIADKLHRLKLQYHKF
        MSTP RSPPS+       A+PE LTQS     Q+HFTDEDE++LLN YL+++ S    KNS PTLDSPA DR+ TA+G KF HS IADKLHRLK+QYHKF
Subjt:  MSTPHRSPPSS-------ASPETLTQSNNQIDQLHFTDEDEINLLNSYLQISRSENPTKNSLPTLDSPAFDRLQTAVGPKFSHSVIADKLHRLKLQYHKF

Query:  ARTKSFIKTPHQRQILDLGRSIWGKSPTPITRKP-------------------------------QFPGNGVWRDGLRRMEEKNLKNMNEKWVLLHIEGA
        ARTKSFIKTPH  +IL++GRSIWGK   P T+                                 QFPGNGVWR+GL+ MEE +LK MNEKWVLLHIE A
Subjt:  ARTKSFIKTPHQRQILDLGRSIWGKSPTPITRKP-------------------------------QFPGNGVWRDGLRRMEEKNLKNMNEKWVLLHIEGA

Query:  ELKARRAALLKQQLRTT
        ELKARR AL+++Q+ TT
Subjt:  ELKARRAALLKQQLRTT

KGN46890.1 hypothetical protein Csa_020607 [Cucumis sativus]1.10e-10877.38Show/hide
Query:  MSTPHRSPPSSASPETLTQSNNQIDQLHFTDEDEINLLNSYLQISRSENPTKNSLPTLDSPAFDRLQTAVGPKFSHSVIADKLHRLKLQYHKFARTKSFI
        MST HRSPPSSASPETLTQSNNQIDQLHF DEDEINLLNSYLQISRSENPTKNSLPTLDS AFDRLQTAVGPKFSHSVIADKLHRLKL YHKFARTKSFI
Subjt:  MSTPHRSPPSSASPETLTQSNNQIDQLHFTDEDEINLLNSYLQISRSENPTKNSLPTLDSPAFDRLQTAVGPKFSHSVIADKLHRLKLQYHKFARTKSFI

Query:  KTPHQRQILDLGRSIWGKSPTPITRKPQ------------------------------------------FPGNGVWRDGLRRMEEKNLKNMNEKWVLLH
        KTPHQRQILDLGRSIWGKSPTP+TRKPQ                                          FPGNGVWRDGLRRM EKNLK+MNEKWVLLH
Subjt:  KTPHQRQILDLGRSIWGKSPTPITRKPQ------------------------------------------FPGNGVWRDGLRRMEEKNLKNMNEKWVLLH

Query:  IEGAELKARRAALLKQQLRTT
        IEGAELKARRAALLK+QLRTT
Subjt:  IEGAELKARRAALLKQQLRTT

XP_015873627.1 probable transcription factor At1g61730 [Ziziphus jujuba]5.74e-3138.69Show/hide
Query:  PSSAS---PETLTQSNNQIDQLHFTDEDEINLLNSYLQISRSENPTKNSLPTLDSPAFDRLQTAVGPKFSHSVIADKLHRLKLQYHKFARTKSFIKTPHQ
        PSS+S   PE  + S     Q  FT+EDE +LL  +  I++S  P+      ++SP  DR++ ++G +FSH+ I DKL RL+L+YHK ARTKS IKT H 
Subjt:  PSSAS---PETLTQSNNQIDQLHFTDEDEINLLNSYLQISRSENPTKNSLPTLDSPAFDRLQTAVGPKFSHSVIADKLHRLKLQYHKFARTKSFIKTPHQ

Query:  RQILDLGRSIWGKSPT---------------------------PITRKPQF---PGNGVWRDGLRRMEEKNLKNMNEKWVLLHIEGAELKARRAALLKQ
        R++  + R IWG+  +                           P+ +   F    GN VW+ GL  +EEK LK +NEKW+LL +E AE+ A RA L K+
Subjt:  RQILDLGRSIWGKSPT---------------------------PITRKPQF---PGNGVWRDGLRRMEEKNLKNMNEKWVLLHIEGAELKARRAALLKQ

TrEMBL top hitse value%identityAlignment
A0A0A0KAX7 Uncharacterized protein2.1e-8477.38Show/hide
Query:  MSTPHRSPPSSASPETLTQSNNQIDQLHFTDEDEINLLNSYLQISRSENPTKNSLPTLDSPAFDRLQTAVGPKFSHSVIADKLHRLKLQYHKFARTKSFI
        MST HRSPPSSASPETLTQSNNQIDQLHF DEDEINLLNSYLQISRSENPTKNSLPTLDS AFDRLQTAVGPKFSHSVIADKLHRLKL YHKFARTKSFI
Subjt:  MSTPHRSPPSSASPETLTQSNNQIDQLHFTDEDEINLLNSYLQISRSENPTKNSLPTLDSPAFDRLQTAVGPKFSHSVIADKLHRLKLQYHKFARTKSFI

Query:  KTPHQRQILDLGRSIWGKSPTPITRKP------------------------------------------QFPGNGVWRDGLRRMEEKNLKNMNEKWVLLH
        KTPHQRQILDLGRSIWGKSPTP+TRKP                                          QFPGNGVWRDGLRRM EKNLK+MNEKWVLLH
Subjt:  KTPHQRQILDLGRSIWGKSPTPITRKP------------------------------------------QFPGNGVWRDGLRRMEEKNLKNMNEKWVLLH

Query:  IEGAELKARRAALLKQQLRTT
        IEGAELKARRAALLK+QLRTT
Subjt:  IEGAELKARRAALLKQQLRTT

A0A5A7T6T1 Serine/arginine repetitive matrix protein 1-like1.1e-8074.67Show/hide
Query:  MSTPHRSPPSSASPE------TLTQSNNQIDQLHFTDEDEINLLNSYLQISRSENPTKNSLPTLDSPAFDRLQTAVGPKFSHSVIADKLHRLKLQYHKFA
        MSTPHRS PS+ASPE      TLTQ NNQ DQLHFTDEDEINLL SYLQISRSENPTKNSLPTLDSPAFDRLQTAVGPKFSHSVIADKLHRLKL YHKFA
Subjt:  MSTPHRSPPSSASPE------TLTQSNNQIDQLHFTDEDEINLLNSYLQISRSENPTKNSLPTLDSPAFDRLQTAVGPKFSHSVIADKLHRLKLQYHKFA

Query:  RTKSFIKTPHQRQILDLGRSIWGKSPTPITRKP------------------------------------------QFPGNGVWRDGLRRMEEKNLKNMNE
        RTKSFIKTPHQRQILDLGRSIWGKSPTPITRKP                                          QFPGNGVWR+GLRRMEEKNLK+MNE
Subjt:  RTKSFIKTPHQRQILDLGRSIWGKSPTPITRKP------------------------------------------QFPGNGVWRDGLRRMEEKNLKNMNE

Query:  KWVLLHIEGAELKARRAALLKQQLR
        KWVLLHIEGAELKARRAALLKQQL+
Subjt:  KWVLLHIEGAELKARRAALLKQQLR

A0A6P3Z773 probable transcription factor At1g617306.3e-2537.86Show/hide
Query:  STPHRSPPSSAS---PETLTQSNNQIDQLHFTDEDEINLLNSYLQISRSENPTKNSLPTLDSPAFDRLQTAVGPKFSHSVIADKLHRLKLQYHKFARTKS
        +T +   PSS+S   PE  + S     Q  FT+EDE +LL  +  I++S  P+      ++SP  DR++ ++G +FSH+ I DKL RL+L+YHK ARTKS
Subjt:  STPHRSPPSSAS---PETLTQSNNQIDQLHFTDEDEINLLNSYLQISRSENPTKNSLPTLDSPAFDRLQTAVGPKFSHSVIADKLHRLKLQYHKFARTKS

Query:  FIKTPHQRQILDLGRSIWGKSPT---------------------------PITRKPQF---PGNGVWRDGLRRMEEKNLKNMNEKWVLLHIEGAELKARR
         IKT H R++  + R IWG+  +                           P+ +   F    GN VW+ GL  +EEK LK +NEKW+LL +E AE+ A R
Subjt:  FIKTPHQRQILDLGRSIWGKSPT---------------------------PITRKPQF---PGNGVWRDGLRRMEEKNLKNMNEKWVLLHIEGAELKARR

Query:  AALLKQ
        A L K+
Subjt:  AALLKQ

A0A7J6E3T6 Uncharacterized protein2.2e-2236.17Show/hide
Query:  MSTPHRSPPSSAS------PETLTQSNNQIDQLHFTDEDEINLLNSYLQISRSENPTKNSLPTLDSPAFDRLQTAVGPKFSHSVIADKLHRLKLQYHKFA
        MSTP RS  ++ +       ++   S+N   +  FT+ DEI+LL S+L++S+  +P+      + SP  +R+QT +  KF+HS I DKL RL+++YH+ A
Subjt:  MSTPHRSPPSSAS------PETLTQSNNQIDQLHFTDEDEINLLNSYLQISRSENPTKNSLPTLDSPAFDRLQTAVGPKFSHSVIADKLHRLKLQYHKFA

Query:  RTKSFIKTPHQRQILDLGRSIWGKSPTPITRKPQFPG-----NGVWRDGLRRMEEKNLKNMNEKWVLLHIEGAELKARRAALLKQQLR
        RTKS IKTPH  ++  + R IWGK    + ++           G W +     +E+ +K + ++WVLL +E AEL +R+A L+K+Q++
Subjt:  RTKSFIKTPHQRQILDLGRSIWGKSPTPITRKPQFPG-----NGVWRDGLRRMEEKNLKNMNEKWVLLHIEGAELKARRAALLKQQLR

A0A7J6G1W6 Uncharacterized protein2.9e-2236.51Show/hide
Query:  MSTPHRSPPSS---ASPETLTQSNNQIDQLHFTDEDEINLLNSYLQISRSENPTKNSLPTLDSPAFDRLQTAVGPKFSHSVIADKLHRLKLQYHKFARTK
        MSTP RS  ++   +  ++   S+N   +  FT+ DEI+LL S+L++S+  +P+      + SP  +R+QT +  KF+HS I DKL RL+++YH+ ARTK
Subjt:  MSTPHRSPPSS---ASPETLTQSNNQIDQLHFTDEDEINLLNSYLQISRSENPTKNSLPTLDSPAFDRLQTAVGPKFSHSVIADKLHRLKLQYHKFARTK

Query:  SFIKTPHQRQILDLGRSIWGKSPTPITR---------KPQFPGNGVWRDGLRRMEEKNLKNMNEKWVLLHIEGAELKARRAALLKQQLR
        S IKTPH  ++  + R IWGK    + +         K +    G W +     +E+ +K + ++WVLL +E AEL +R+A L+K+Q++
Subjt:  SFIKTPHQRQILDLGRSIWGKSPTPITR---------KPQFPGNGVWRDGLRRMEEKNLKNMNEKWVLLHIEGAELKARRAALLKQQLR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAACGCCCCACCGGTCACCGCCGTCCAGCGCCTCTCCCGAAACCCTAACCCAATCCAACAACCAAATCGATCAACTTCATTTCACCGACGAAGATGAAATCAATCT
CCTGAATTCCTACCTCCAAATCTCCAGATCCGAAAACCCCACCAAGAATTCTCTCCCCACTCTCGATTCTCCGGCCTTCGACCGCCTTCAGACCGCCGTCGGCCCCAAAT
TCTCCCACTCCGTCATCGCCGATAAGCTCCACCGACTCAAACTCCAGTACCACAAATTCGCAAGAACAAAGTCCTTCATCAAAACTCCTCACCAACGTCAGATCCTCGAC
CTCGGCCGCAGCATCTGGGGAAAATCCCCCACACCTATAACAAGAAAACCACAGTTTCCGGGGAATGGGGTGTGGAGAGATGGGCTGAGGAGAATGGAGGAGAAGAATTT
GAAGAATATGAATGAGAAATGGGTTTTGTTGCATATTGAAGGGGCTGAGCTTAAAGCCAGAAGGGCTGCTTTATTAAAGCAGCAACTTAGAACTACATAG
mRNA sequenceShow/hide mRNA sequence
ATGTCAACGCCCCACCGGTCACCGCCGTCCAGCGCCTCTCCCGAAACCCTAACCCAATCCAACAACCAAATCGATCAACTTCATTTCACCGACGAAGATGAAATCAATCT
CCTGAATTCCTACCTCCAAATCTCCAGATCCGAAAACCCCACCAAGAATTCTCTCCCCACTCTCGATTCTCCGGCCTTCGACCGCCTTCAGACCGCCGTCGGCCCCAAAT
TCTCCCACTCCGTCATCGCCGATAAGCTCCACCGACTCAAACTCCAGTACCACAAATTCGCAAGAACAAAGTCCTTCATCAAAACTCCTCACCAACGTCAGATCCTCGAC
CTCGGCCGCAGCATCTGGGGAAAATCCCCCACACCTATAACAAGAAAACCACAGTTTCCGGGGAATGGGGTGTGGAGAGATGGGCTGAGGAGAATGGAGGAGAAGAATTT
GAAGAATATGAATGAGAAATGGGTTTTGTTGCATATTGAAGGGGCTGAGCTTAAAGCCAGAAGGGCTGCTTTATTAAAGCAGCAACTTAGAACTACATAG
Protein sequenceShow/hide protein sequence
MSTPHRSPPSSASPETLTQSNNQIDQLHFTDEDEINLLNSYLQISRSENPTKNSLPTLDSPAFDRLQTAVGPKFSHSVIADKLHRLKLQYHKFARTKSFIKTPHQRQILD
LGRSIWGKSPTPITRKPQFPGNGVWRDGLRRMEEKNLKNMNEKWVLLHIEGAELKARRAALLKQQLRTT