; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy11G194650 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy11G194650
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionXS domain-containing protein
Genome locationchrH11:12273451..12274320
RNA-Seq ExpressionChy11G194650
SyntenyChy11G194650
Gene Ontology termsGO:0031047 - gene silencing by RNA (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570498.1 hypothetical protein SDJN03_29413, partial [Cucurbita argyrosperma subsp. sororia]9.71e-0441Show/hide
Query:  MVRIPKDDFYRDSTRTSVVMDSVVEGFQDTESHFEETTRPRDRYAFIEGSCMSTAQVAMEQYVEVLGSGTESSQNDETEAYISSEKLLLVEEDGYRTNYG
        M+RIP+DD Y+      VVMD VV G         E T PR+ Y   +   +          +E    GT S   DE+EAY   EKL L EEDGYR NYG
Subjt:  MVRIPKDDFYRDSTRTSVVMDSVVEGFQDTESHFEETTRPRDRYAFIEGSCMSTAQVAMEQYVEVLGSGTESSQNDETEAYISSEKLLLVEEDGYRTNYG

XP_008458617.1 PREDICTED: uncharacterized protein LOC103497964 [Cucumis melo]2.16e-15180.62Show/hide
Query:  MGLKHVNGSDSDNRGIRVSGSHLGTSSKSIFGDSLRTFHMNIGATKDSNVKNNGDTSRSVGISDCSHFSSSRKYDGPVYDINDVHVRD------------
        MGLKHVNGSD DNRGIRVSGSHLGTSSKSI G +LRTFHMNIGATKDSNVKNNGDTSRSVGI+DC+H SSSRKYDGP++DIN+VHVRD            
Subjt:  MGLKHVNGSDSDNRGIRVSGSHLGTSSKSIFGDSLRTFHMNIGATKDSNVKNNGDTSRSVGISDCSHFSSSRKYDGPVYDINDVHVRD------------

Query:  ------------PSHLHSNAPVAEPKGILQDEFHDLLEYKLARRNHIEHFDNRNQYFSVQPCMRTDIDAGPSSPFSQQMVRIPKDDFYRDSTRTSVVMDS
                     SHLHS+APVAE KGI Q EFHDLLEYK ARRNHIEHFD+ NQYFSVQPC RTDIDAGPS PFSQ MVRIP+DDFYRDSTRTSVVMDS
Subjt:  ------------PSHLHSNAPVAEPKGILQDEFHDLLEYKLARRNHIEHFDNRNQYFSVQPCMRTDIDAGPSSPFSQQMVRIPKDDFYRDSTRTSVVMDS

Query:  VVEGFQDTESHFEETTRPRDRYAFIEGSCMSTAQVAMEQYVEVLGSGTESSQNDETEAYISSEKLLLVEEDGYRTNYGKWSLEDGVNRS
        VVEGFQDTESHFEETTRPRD  AFIEGSCMSTA  AMEQYVEVLGSGTESSQ+ E EAYISSEKLLLVEEDGYRTN+GKW+LEDGVN S
Subjt:  VVEGFQDTESHFEETTRPRDRYAFIEGSCMSTAQVAMEQYVEVLGSGTESSQNDETEAYISSEKLLLVEEDGYRTNYGKWSLEDGVNRS

XP_022986025.1 uncharacterized protein LOC111483886 [Cucurbita maxima]3.90e-1041.18Show/hide
Query:  RRNHIEHFDNRNQYFSVQPCMRTDIDAGPSSPFSQQMVRIPKDDFYRDSTRTSVVMDSVVEGFQDTESHFEETTRPRDRYAFIEGSCMSTAQVAMEQYVE
        R NHIE FDN    F V PC            FSQ+M+RIP+DD Y+      VVMD VVEGF+D ES                                
Subjt:  RRNHIEHFDNRNQYFSVQPCMRTDIDAGPSSPFSQQMVRIPKDDFYRDSTRTSVVMDSVVEGFQDTESHFEETTRPRDRYAFIEGSCMSTAQVAMEQYVE

Query:  VLGSGTESSQNDETEAYISSEKLLLVEEDGYRTNYG
        V+GSGT S   DE+EAY+   +L L EEDGYR NYG
Subjt:  VLGSGTESSQNDETEAYISSEKLLLVEEDGYRTNYG

XP_038900433.1 uncharacterized protein LOC120087658 [Benincasa hispida]5.49e-11668.24Show/hide
Query:  MGLKHVNGSDSDNRGIRVSGSHLGTSSKSIFGDS-LRTFHMNIGATKDSNVKNNGDTSRSVGISDCSHFSSSRKYDGPVYDINDVHVRD-----------
        MGLKH N  D  NRGIRVSGSHLGTSS +I G S LRTFHMNIG TKDSNVKNNGD SRS GI DCSH SSSRK+DGP+Y+ +DVHVRD           
Subjt:  MGLKHVNGSDSDNRGIRVSGSHLGTSSKSIFGDS-LRTFHMNIGATKDSNVKNNGDTSRSVGISDCSHFSSSRKYDGPVYDINDVHVRD-----------

Query:  -------------PSHLHSNAPVAEPKGILQDEFHDLLEYKLARRNHIEHFDNRNQYFSVQPCMRTDIDAGPSSPFSQQMVRIPKDDFYRDSTRTSVVMD
                      S+L S+APV E KGI QDEFHD LEYK ARRN+IE FD+ NQYFSVQP  R+DIDA  +S FSQQMVRIP+DDFY+DSTRTSVVMD
Subjt:  -------------PSHLHSNAPVAEPKGILQDEFHDLLEYKLARRNHIEHFDNRNQYFSVQPCMRTDIDAGPSSPFSQQMVRIPKDDFYRDSTRTSVVMD

Query:  SVVEGFQDTESHFEETTRPRDRYA------FIEGSCMSTAQVAMEQYVEVLGSGTESSQNDETEAYISSEKLLLVEEDGYRTNYGKWSLEDGVNRS
        SVVEGF+DTESH EETTRPRDRY        IEGS M TA   ME Y E LGSG ESS   E EAYISSEKLLL EEDGYRT YGKW  EDGVN S
Subjt:  SVVEGFQDTESHFEETTRPRDRYA------FIEGSCMSTAQVAMEQYVEVLGSGTESSQNDETEAYISSEKLLLVEEDGYRTNYGKWSLEDGVNRS

TrEMBL top hitse value%identityAlignment
A0A1S3C894 uncharacterized protein LOC1034979643.0e-12480.62Show/hide
Query:  MGLKHVNGSDSDNRGIRVSGSHLGTSSKSIFGDSLRTFHMNIGATKDSNVKNNGDTSRSVGISDCSHFSSSRKYDGPVYDINDVHVRD------------
        MGLKHVNGSD DNRGIRVSGSHLGTSSKSI G +LRTFHMNIGATKDSNVKNNGDTSRSVGI+DC+H SSSRKYDGP++DIN+VHVRD            
Subjt:  MGLKHVNGSDSDNRGIRVSGSHLGTSSKSIFGDSLRTFHMNIGATKDSNVKNNGDTSRSVGISDCSHFSSSRKYDGPVYDINDVHVRD------------

Query:  ------------PSHLHSNAPVAEPKGILQDEFHDLLEYKLARRNHIEHFDNRNQYFSVQPCMRTDIDAGPSSPFSQQMVRIPKDDFYRDSTRTSVVMDS
                     SHLHS+APVAE KGI Q EFHDLLEYK ARRNHIEHFD+ NQYFSVQPC RTDIDAGPS PFSQ MVRIP+DDFYRDSTRTSVVMDS
Subjt:  ------------PSHLHSNAPVAEPKGILQDEFHDLLEYKLARRNHIEHFDNRNQYFSVQPCMRTDIDAGPSSPFSQQMVRIPKDDFYRDSTRTSVVMDS

Query:  VVEGFQDTESHFEETTRPRDRYAFIEGSCMSTAQVAMEQYVEVLGSGTESSQNDETEAYISSEKLLLVEEDGYRTNYGKWSLEDGVNRS
        VVEGFQDTESHFEETTRPRD  AFIEGSCMSTA  AMEQYVEVLGSGTESSQ+ E EAYISSEKLLLVEEDGYRTN+GKW+LEDGVN S
Subjt:  VVEGFQDTESHFEETTRPRDRYAFIEGSCMSTAQVAMEQYVEVLGSGTESSQNDETEAYISSEKLLLVEEDGYRTNYGKWSLEDGVNRS

A0A5A7SQC0 XS domain-containing protein3.0e-12480.62Show/hide
Query:  MGLKHVNGSDSDNRGIRVSGSHLGTSSKSIFGDSLRTFHMNIGATKDSNVKNNGDTSRSVGISDCSHFSSSRKYDGPVYDINDVHVRD------------
        MGLKHVNGSD DNRGIRVSGSHLGTSSKSI G +LRTFHMNIGATKDSNVKNNGDTSRSVGI+DC+H SSSRKYDGP++DIN+VHVRD            
Subjt:  MGLKHVNGSDSDNRGIRVSGSHLGTSSKSIFGDSLRTFHMNIGATKDSNVKNNGDTSRSVGISDCSHFSSSRKYDGPVYDINDVHVRD------------

Query:  ------------PSHLHSNAPVAEPKGILQDEFHDLLEYKLARRNHIEHFDNRNQYFSVQPCMRTDIDAGPSSPFSQQMVRIPKDDFYRDSTRTSVVMDS
                     SHLHS+APVAE KGI Q EFHDLLEYK ARRNHIEHFD+ NQYFSVQPC RTDIDAGPS PFSQ MVRIP+DDFYRDSTRTSVVMDS
Subjt:  ------------PSHLHSNAPVAEPKGILQDEFHDLLEYKLARRNHIEHFDNRNQYFSVQPCMRTDIDAGPSSPFSQQMVRIPKDDFYRDSTRTSVVMDS

Query:  VVEGFQDTESHFEETTRPRDRYAFIEGSCMSTAQVAMEQYVEVLGSGTESSQNDETEAYISSEKLLLVEEDGYRTNYGKWSLEDGVNRS
        VVEGFQDTESHFEETTRPRD  AFIEGSCMSTA  AMEQYVEVLGSGTESSQ+ E EAYISSEKLLLVEEDGYRTN+GKW+LEDGVN S
Subjt:  VVEGFQDTESHFEETTRPRDRYAFIEGSCMSTAQVAMEQYVEVLGSGTESSQNDETEAYISSEKLLLVEEDGYRTNYGKWSLEDGVNRS

A0A6J1JCX0 uncharacterized protein LOC1114838869.3e-0941.18Show/hide
Query:  RRNHIEHFDNRNQYFSVQPCMRTDIDAGPSSPFSQQMVRIPKDDFYRDSTRTSVVMDSVVEGFQDTESHFEETTRPRDRYAFIEGSCMSTAQVAMEQYVE
        R NHIE FDN    F V PC            FSQ+M+RIP+DD Y+      VVMD VVEGF+D ES                                
Subjt:  RRNHIEHFDNRNQYFSVQPCMRTDIDAGPSSPFSQQMVRIPKDDFYRDSTRTSVVMDSVVEGFQDTESHFEETTRPRDRYAFIEGSCMSTAQVAMEQYVE

Query:  VLGSGTESSQNDETEAYISSEKLLLVEEDGYRTNYG
        V+GSGT S   DE+EAY+   +L L EEDGYR NYG
Subjt:  VLGSGTESSQNDETEAYISSEKLLLVEEDGYRTNYG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATTGAAACATGTTAATGGGTCTGATAGTGATAATCGAGGAATTAGGGTTTCTGGTTCACATTTGGGTACGTCGTCCAAGAGTATTTTTGGTGATAGTTTGCGGAC
ATTCCATATGAATATTGGGGCAACTAAAGATAGTAACGTAAAGAACAATGGGGATACTTCCAGAAGTGTTGGAATCAGTGACTGTAGCCACTTTTCTTCTTCTAGAAAGT
ATGATGGGCCCGTGTATGACATCAATGATGTTCATGTTCGGGACCCGTCTCATCTTCACTCCAATGCGCCTGTTGCTGAACCTAAAGGCATTTTGCAAGACGAATTTCAT
GATTTACTGGAGTATAAATTAGCTCGGAGGAACCATATTGAACATTTTGACAATAGAAATCAATATTTCTCAGTTCAGCCATGTATGAGGACTGATATCGATGCTGGGCC
TAGCAGTCCTTTCTCTCAGCAAATGGTTCGAATCCCGAAAGATGATTTCTATCGGGATTCTACAAGGACCAGTGTTGTAATGGATTCTGTTGTCGAAGGATTCCAAGACA
CTGAAAGCCATTTTGAAGAGACTACCCGACCAAGAGACCGCTATGCTTTCATTGAAGGTTCTTGTATGAGCACTGCCCAAGTTGCGATGGAACAATATGTTGAAGTTTTG
GGTTCAGGAACTGAAAGTTCACAGAATGATGAAACAGAAGCATATATAAGCAGTGAGAAATTACTTTTGGTTGAAGAAGATGGTTATAGGACAAATTATGGGAAATGGTC
ACTTGAAGATGGAGTAAATAGATCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGATTGAAACATGTTAATGGGTCTGATAGTGATAATCGAGGAATTAGGGTTTCTGGTTCACATTTGGGTACGTCGTCCAAGAGTATTTTTGGTGATAGTTTGCGGAC
ATTCCATATGAATATTGGGGCAACTAAAGATAGTAACGTAAAGAACAATGGGGATACTTCCAGAAGTGTTGGAATCAGTGACTGTAGCCACTTTTCTTCTTCTAGAAAGT
ATGATGGGCCCGTGTATGACATCAATGATGTTCATGTTCGGGACCCGTCTCATCTTCACTCCAATGCGCCTGTTGCTGAACCTAAAGGCATTTTGCAAGACGAATTTCAT
GATTTACTGGAGTATAAATTAGCTCGGAGGAACCATATTGAACATTTTGACAATAGAAATCAATATTTCTCAGTTCAGCCATGTATGAGGACTGATATCGATGCTGGGCC
TAGCAGTCCTTTCTCTCAGCAAATGGTTCGAATCCCGAAAGATGATTTCTATCGGGATTCTACAAGGACCAGTGTTGTAATGGATTCTGTTGTCGAAGGATTCCAAGACA
CTGAAAGCCATTTTGAAGAGACTACCCGACCAAGAGACCGCTATGCTTTCATTGAAGGTTCTTGTATGAGCACTGCCCAAGTTGCGATGGAACAATATGTTGAAGTTTTG
GGTTCAGGAACTGAAAGTTCACAGAATGATGAAACAGAAGCATATATAAGCAGTGAGAAATTACTTTTGGTTGAAGAAGATGGTTATAGGACAAATTATGGGAAATGGTC
ACTTGAAGATGGAGTAAATAGATCATAA
Protein sequenceShow/hide protein sequence
MGLKHVNGSDSDNRGIRVSGSHLGTSSKSIFGDSLRTFHMNIGATKDSNVKNNGDTSRSVGISDCSHFSSSRKYDGPVYDINDVHVRDPSHLHSNAPVAEPKGILQDEFH
DLLEYKLARRNHIEHFDNRNQYFSVQPCMRTDIDAGPSSPFSQQMVRIPKDDFYRDSTRTSVVMDSVVEGFQDTESHFEETTRPRDRYAFIEGSCMSTAQVAMEQYVEVL
GSGTESSQNDETEAYISSEKLLLVEEDGYRTNYGKWSLEDGVNRS