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Chy11G194730 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy11G194730
OrganismCucumis hystrix (Cucumber (hystrix) v1)
Description60S acidic ribosomal protein family
Genome locationchrH11:12332530..12333268
RNA-Seq ExpressionChy11G194730
SyntenyChy11G194730
Gene Ontology termsGO:0002182 - cytoplasmic translational elongation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR027534 - Ribosomal protein L12/P1/P2 family
IPR038716 - Ribosomal protein P1/P2, N-terminal domain
IPR044076 - Ribosomal protein P2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7010354.1 60S acidic ribosomal protein P2B [Cucurbita argyrosperma subsp. argyrosperma]4.13e-6088.7Show/hide
Query:  MKVVAAYLLAVLGGNTSPGVDDVKSILNSVGAEIDEERITLLLSQVKGKDVTELIASGREKLASVPSGGGAIAVSAAAGGAAGGGAAPAPAEQKKEEKVE
        MKVVAAYLLAVLGGNTSPG+DDVK ILNSVGAE+DE+RI  LLSQVKGKD+TELIASGREKLASVPSGGGA+ ++A AGGAAGGGAAPA AEQKKEEKVE
Subjt:  MKVVAAYLLAVLGGNTSPGVDDVKSILNSVGAEIDEERITLLLSQVKGKDVTELIASGREKLASVPSGGGAIAVSAAAGGAAGGGAAPAPAEQKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLFD
Subjt:  EKEESDDDMGFSLFD

XP_004145795.1 60S acidic ribosomal protein P2B [Cucumis sativus]9.05e-6494.78Show/hide
Query:  MKVVAAYLLAVLGGNTSPGVDDVKSILNSVGAEIDEERITLLLSQVKGKDVTELIASGREKLASVPSGGGAIAVSAAAGGAAGGGAAPAPAEQKKEEKVE
        MKVVAAYLLAVLGGNTSPG DDVKSILNSVGAEIDEERITLLL++VKGKD+TELIASGREKLASVPSGGGAIAVSAAAGGA GGGAA APAEQKKEEKVE
Subjt:  MKVVAAYLLAVLGGNTSPGVDDVKSILNSVGAEIDEERITLLLSQVKGKDVTELIASGREKLASVPSGGGAIAVSAAAGGAAGGGAAPAPAEQKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLFD
Subjt:  EKEESDDDMGFSLFD

XP_008458601.1 PREDICTED: 60S acidic ribosomal protein P2B-like [Cucumis melo]2.70e-6596.52Show/hide
Query:  MKVVAAYLLAVLGGNTSPGVDDVKSILNSVGAEIDEERITLLLSQVKGKDVTELIASGREKLASVPSGGGAIAVSAAAGGAAGGGAAPAPAEQKKEEKVE
        MKVVAAYLLAVLGGNTSPGVDDVK+ILNSVG EIDEERITLLLS+VKGKDVTELIASGREKLASVPSGGGAIAVSA+AGGAAGGGAAPAPAEQKKEEKVE
Subjt:  MKVVAAYLLAVLGGNTSPGVDDVKSILNSVGAEIDEERITLLLSQVKGKDVTELIASGREKLASVPSGGGAIAVSAAAGGAAGGGAAPAPAEQKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLFD
Subjt:  EKEESDDDMGFSLFD

XP_022986046.1 60S acidic ribosomal protein P2B-like [Cucurbita maxima]1.68e-5987.83Show/hide
Query:  MKVVAAYLLAVLGGNTSPGVDDVKSILNSVGAEIDEERITLLLSQVKGKDVTELIASGREKLASVPSGGGAIAVSAAAGGAAGGGAAPAPAEQKKEEKVE
        MKVVAAYLLAVLGGNTSPG+DDVK ILNSVGAE+DE+RI  LLSQVKGKD+TELIASGREKLASVPSGGGA+ ++A AGGAAGGGAAPA  EQKKEEKVE
Subjt:  MKVVAAYLLAVLGGNTSPGVDDVKSILNSVGAEIDEERITLLLSQVKGKDVTELIASGREKLASVPSGGGAIAVSAAAGGAAGGGAAPAPAEQKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLFD
Subjt:  EKEESDDDMGFSLFD

XP_038901119.1 60S acidic ribosomal protein P2B-like [Benincasa hispida]4.13e-6091.3Show/hide
Query:  MKVVAAYLLAVLGGNTSPGVDDVKSILNSVGAEIDEERITLLLSQVKGKDVTELIASGREKLASVPSGGGAIAVSAAAGGAAGGGAAPAPAEQKKEEKVE
        MKVVAAYLLAVLGGN SPG+DDVKSILNSVGAE+D++RI LLLSQVKGKD+TELIASGREKLASVPSGGGAIAVSA AGGAAGGGAA A AEQKKEEKVE
Subjt:  MKVVAAYLLAVLGGNTSPGVDDVKSILNSVGAEIDEERITLLLSQVKGKDVTELIASGREKLASVPSGGGAIAVSAAAGGAAGGGAAPAPAEQKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLFD
Subjt:  EKEESDDDMGFSLFD

TrEMBL top hitse value%identityAlignment
A0A0A0KGP6 Uncharacterized protein1.1e-4694.78Show/hide
Query:  MKVVAAYLLAVLGGNTSPGVDDVKSILNSVGAEIDEERITLLLSQVKGKDVTELIASGREKLASVPSGGGAIAVSAAAGGAAGGGAAPAPAEQKKEEKVE
        MKVVAAYLLAVLGGNTSPG DDVKSILNSVGAEIDEERITLLL++VKGKD+TELIASGREKLASVPSGGGAIAVSAAAGGA GGGAA APAEQKKEEKVE
Subjt:  MKVVAAYLLAVLGGNTSPGVDDVKSILNSVGAEIDEERITLLLSQVKGKDVTELIASGREKLASVPSGGGAIAVSAAAGGAAGGGAAPAPAEQKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLFD
Subjt:  EKEESDDDMGFSLFD

A0A1S3C8T5 60S acidic ribosomal protein P2B-like7.6e-4896.52Show/hide
Query:  MKVVAAYLLAVLGGNTSPGVDDVKSILNSVGAEIDEERITLLLSQVKGKDVTELIASGREKLASVPSGGGAIAVSAAAGGAAGGGAAPAPAEQKKEEKVE
        MKVVAAYLLAVLGGNTSPGVDDVK+ILNSVG EIDEERITLLLS+VKGKDVTELIASGREKLASVPSGGGAIAVSA+AGGAAGGGAAPAPAEQKKEEKVE
Subjt:  MKVVAAYLLAVLGGNTSPGVDDVKSILNSVGAEIDEERITLLLSQVKGKDVTELIASGREKLASVPSGGGAIAVSAAAGGAAGGGAAPAPAEQKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLFD
Subjt:  EKEESDDDMGFSLFD

A0A5A7SR49 60S acidic ribosomal protein P2B-like7.6e-4896.52Show/hide
Query:  MKVVAAYLLAVLGGNTSPGVDDVKSILNSVGAEIDEERITLLLSQVKGKDVTELIASGREKLASVPSGGGAIAVSAAAGGAAGGGAAPAPAEQKKEEKVE
        MKVVAAYLLAVLGGNTSPGVDDVK+ILNSVG EIDEERITLLLS+VKGKDVTELIASGREKLASVPSGGGAIAVSA+AGGAAGGGAAPAPAEQKKEEKVE
Subjt:  MKVVAAYLLAVLGGNTSPGVDDVKSILNSVGAEIDEERITLLLSQVKGKDVTELIASGREKLASVPSGGGAIAVSAAAGGAAGGGAAPAPAEQKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLFD
Subjt:  EKEESDDDMGFSLFD

A0A6J1FYH3 60S acidic ribosomal protein P2B-like1.9e-4387.83Show/hide
Query:  MKVVAAYLLAVLGGNTSPGVDDVKSILNSVGAEIDEERITLLLSQVKGKDVTELIASGREKLASVPSGGGAIAVSAAAGGAAGGGAAPAPAEQKKEEKVE
        MKVVAAYLLAVLGGNTSPG+DDVK ILNSVGAE+DE+RI  LLSQVKGKD+TELIASGREKLASVPSGGGA+ ++A AGG AGGGAAPA AEQKKEEKVE
Subjt:  MKVVAAYLLAVLGGNTSPGVDDVKSILNSVGAEIDEERITLLLSQVKGKDVTELIASGREKLASVPSGGGAIAVSAAAGGAAGGGAAPAPAEQKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLFD
Subjt:  EKEESDDDMGFSLFD

A0A6J1J9Z4 60S acidic ribosomal protein P2B-like1.9e-4387.83Show/hide
Query:  MKVVAAYLLAVLGGNTSPGVDDVKSILNSVGAEIDEERITLLLSQVKGKDVTELIASGREKLASVPSGGGAIAVSAAAGGAAGGGAAPAPAEQKKEEKVE
        MKVVAAYLLAVLGGNTSPG+DDVK ILNSVGAE+DE+RI  LLSQVKGKD+TELIASGREKLASVPSGGGA+ ++A AGGAAGGGAAPA  EQKKEEKVE
Subjt:  MKVVAAYLLAVLGGNTSPGVDDVKSILNSVGAEIDEERITLLLSQVKGKDVTELIASGREKLASVPSGGGAIAVSAAAGGAAGGGAAPAPAEQKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLFD
Subjt:  EKEESDDDMGFSLFD

SwissProt top hitse value%identityAlignment
O24415 60S acidic ribosomal protein P2B5.4e-3574.78Show/hide
Query:  MKVVAAYLLAVLGGNTSPGVDDVKSILNSVGAEIDEERITLLLSQVKGKDVTELIASGREKLASVPSGGGAIAVSAAAGGAAGGGAAPAPAEQKKEEKVE
        MKV+AAYLLAVLGGNTSP  DDVKSIL SVGAE DEE++  LL+++K KD+TE+IA+GRE+L+SVPSGGGAI + A A   AGGGAAPA  E KKEEKVE
Subjt:  MKVVAAYLLAVLGGNTSPGVDDVKSILNSVGAEIDEERITLLLSQVKGKDVTELIASGREKLASVPSGGGAIAVSAAAGGAAGGGAAPAPAEQKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESD+DMGFSLFD
Subjt:  EKEESDDDMGFSLFD

P41099 60S acidic ribosomal protein P21.3e-3170.43Show/hide
Query:  MKVVAAYLLAVLGGNTSPGVDDVKSILNSVGAEIDEERITLLLSQVKGKDVTELIASGREKLASVPSGGGAIAVSAAAGGAAGGGAAPAPAEQKKEEKVE
        MKV+AA+LLA+LGGNTSP  +D+KSIL SVGA+ D+++I LLLSQVKGKD+TELIASGRE+LASVPSGGG +AV+AAAGG  G   A A  E KKEEK E
Subjt:  MKVVAAYLLAVLGGNTSPGVDDVKSILNSVGAEIDEERITLLLSQVKGKDVTELIASGREKLASVPSGGGAIAVSAAAGGAAGGGAAPAPAEQKKEEKVE

Query:  EKEESDDDMGFSLFD
          EESD+++GFSLFD
Subjt:  EKEESDDDMGFSLFD

P46252 60S acidic ribosomal protein P2A2.7e-3473.91Show/hide
Query:  MKVVAAYLLAVLGGNTSPGVDDVKSILNSVGAEIDEERITLLLSQVKGKDVTELIASGREKLASVPSGGGAIAVSAAAGGAAGGGAAPAPAEQKKEEKVE
        MK VAAYLLAVL GN SP  DD+ +IL SVG E+D E++ LLLSQ+ GKD+TELIA+GREK ASVP GGG +AV+AAA   A GGAAPA AE KKEEKVE
Subjt:  MKVVAAYLLAVLGGNTSPGVDDVKSILNSVGAEIDEERITLLLSQVKGKDVTELIASGREKLASVPSGGGAIAVSAAAGGAAGGGAAPAPAEQKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLFD
Subjt:  EKEESDDDMGFSLFD

P51407 60S acidic ribosomal protein P2-19.6e-3269.83Show/hide
Query:  MKVVAAYLLAVLGGNTSPGVDDVKSILNSVGAEIDEERITLLLSQVKGKDVTELIASGREKLASVPS-GGGAIAVSAAAGGAAGGGAAPAPAEQKKEEKV
        MKVVAA+LLAVL G  SP   D+K IL SVGAE ++ +I LLL +VKGKD+ ELIA+GREKLASVPS GGG +AV++A  G  GGG APA AE KKEEK 
Subjt:  MKVVAAYLLAVLGGNTSPGVDDVKSILNSVGAEIDEERITLLLSQVKGKDVTELIASGREKLASVPS-GGGAIAVSAAAGGAAGGGAAPAPAEQKKEEKV

Query:  EEKEESDDDMGFSLFD
        EEKEESDDDMGFSLF+
Subjt:  EEKEESDDDMGFSLFD

Q9SLF7 60S acidic ribosomal protein P2-24.8e-3169.83Show/hide
Query:  MKVVAAYLLAVLGGNTSPGVDDVKSILNSVGAEIDEERITLLLSQVKGKDVTELIASGREKLASVPS-GGGAIAVSAAAGGAAGGGAAPAPAEQKKEEKV
        MKVVAAYLLAVL G  SP   D+K+IL SVGAE ++ +I LLL +VKGKD+ ELIA+GREKLASVPS GGG +AV++A  G  GGG A A AE KKEEK 
Subjt:  MKVVAAYLLAVLGGNTSPGVDDVKSILNSVGAEIDEERITLLLSQVKGKDVTELIASGREKLASVPS-GGGAIAVSAAAGGAAGGGAAPAPAEQKKEEKV

Query:  EEKEESDDDMGFSLFD
        EEKEESDDDMGFSLF+
Subjt:  EEKEESDDDMGFSLFD

Arabidopsis top hitse value%identityAlignment
AT2G27710.1 60S acidic ribosomal protein family3.4e-3269.83Show/hide
Query:  MKVVAAYLLAVLGGNTSPGVDDVKSILNSVGAEIDEERITLLLSQVKGKDVTELIASGREKLASVPS-GGGAIAVSAAAGGAAGGGAAPAPAEQKKEEKV
        MKVVAAYLLAVL G  SP   D+K+IL SVGAE ++ +I LLL +VKGKD+ ELIA+GREKLASVPS GGG +AV++A  G  GGG A A AE KKEEK 
Subjt:  MKVVAAYLLAVLGGNTSPGVDDVKSILNSVGAEIDEERITLLLSQVKGKDVTELIASGREKLASVPS-GGGAIAVSAAAGGAAGGGAAPAPAEQKKEEKV

Query:  EEKEESDDDMGFSLFD
        EEKEESDDDMGFSLF+
Subjt:  EEKEESDDDMGFSLFD

AT2G27710.2 60S acidic ribosomal protein family3.4e-3269.83Show/hide
Query:  MKVVAAYLLAVLGGNTSPGVDDVKSILNSVGAEIDEERITLLLSQVKGKDVTELIASGREKLASVPS-GGGAIAVSAAAGGAAGGGAAPAPAEQKKEEKV
        MKVVAAYLLAVL G  SP   D+K+IL SVGAE ++ +I LLL +VKGKD+ ELIA+GREKLASVPS GGG +AV++A  G  GGG A A AE KKEEK 
Subjt:  MKVVAAYLLAVLGGNTSPGVDDVKSILNSVGAEIDEERITLLLSQVKGKDVTELIASGREKLASVPS-GGGAIAVSAAAGGAAGGGAAPAPAEQKKEEKV

Query:  EEKEESDDDMGFSLFD
        EEKEESDDDMGFSLF+
Subjt:  EEKEESDDDMGFSLFD

AT2G27710.3 60S acidic ribosomal protein family3.4e-3269.83Show/hide
Query:  MKVVAAYLLAVLGGNTSPGVDDVKSILNSVGAEIDEERITLLLSQVKGKDVTELIASGREKLASVPS-GGGAIAVSAAAGGAAGGGAAPAPAEQKKEEKV
        MKVVAAYLLAVL G  SP   D+K+IL SVGAE ++ +I LLL +VKGKD+ ELIA+GREKLASVPS GGG +AV++A  G  GGG A A AE KKEEK 
Subjt:  MKVVAAYLLAVLGGNTSPGVDDVKSILNSVGAEIDEERITLLLSQVKGKDVTELIASGREKLASVPS-GGGAIAVSAAAGGAAGGGAAPAPAEQKKEEKV

Query:  EEKEESDDDMGFSLFD
        EEKEESDDDMGFSLF+
Subjt:  EEKEESDDDMGFSLFD

AT2G27720.1 60S acidic ribosomal protein family6.8e-3369.83Show/hide
Query:  MKVVAAYLLAVLGGNTSPGVDDVKSILNSVGAEIDEERITLLLSQVKGKDVTELIASGREKLASVPS-GGGAIAVSAAAGGAAGGGAAPAPAEQKKEEKV
        MKVVAA+LLAVL G  SP   D+K IL SVGAE ++ +I LLL +VKGKD+ ELIA+GREKLASVPS GGG +AV++A  G  GGG APA AE KKEEK 
Subjt:  MKVVAAYLLAVLGGNTSPGVDDVKSILNSVGAEIDEERITLLLSQVKGKDVTELIASGREKLASVPS-GGGAIAVSAAAGGAAGGGAAPAPAEQKKEEKV

Query:  EEKEESDDDMGFSLFD
        EEKEESDDDMGFSLF+
Subjt:  EEKEESDDDMGFSLFD

AT3G44590.2 60S acidic ribosomal protein family4.4e-3267.83Show/hide
Query:  MKVVAAYLLAVLGGNTSPGVDDVKSILNSVGAEIDEERITLLLSQVKGKDVTELIASGREKLASVPSGGGAIAVSAAAGGAAGGGAAPAPAEQKKEEKVE
        MKV AA+LLAVLGGN +P  D++K I+ +VGA++D E I LLL +V GKD+ ELIASGREKLASVPSGGG +AVSAA     GG AAPA   +KKE K E
Subjt:  MKVVAAYLLAVLGGNTSPGVDDVKSILNSVGAEIDEERITLLLSQVKGKDVTELIASGREKLASVPSGGGAIAVSAAAGGAAGGGAAPAPAEQKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLF+
Subjt:  EKEESDDDMGFSLFD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGTGGTCGCTGCATATTTGTTGGCCGTTCTCGGTGGCAACACCAGCCCCGGAGTCGATGATGTGAAGTCTATTCTTAATTCAGTTGGGGCTGAGATAGATGAAGA
GAGGATCACTTTGCTCTTATCGCAAGTGAAAGGAAAGGATGTCACAGAGTTGATAGCCTCCGGACGGGAGAAGTTGGCATCAGTGCCGTCTGGTGGCGGTGCAATCGCCG
TCTCCGCCGCTGCTGGCGGTGCCGCTGGTGGTGGTGCAGCACCAGCCCCAGCCGAGCAGAAGAAAGAAGAGAAGGTCGAGGAGAAAGAAGAATCAGACGATGATATGGGT
TTCAGCCTCTTTGACTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGTGGTCGCTGCATATTTGTTGGCCGTTCTCGGTGGCAACACCAGCCCCGGAGTCGATGATGTGAAGTCTATTCTTAATTCAGTTGGGGCTGAGATAGATGAAGA
GAGGATCACTTTGCTCTTATCGCAAGTGAAAGGAAAGGATGTCACAGAGTTGATAGCCTCCGGACGGGAGAAGTTGGCATCAGTGCCGTCTGGTGGCGGTGCAATCGCCG
TCTCCGCCGCTGCTGGCGGTGCCGCTGGTGGTGGTGCAGCACCAGCCCCAGCCGAGCAGAAGAAAGAAGAGAAGGTCGAGGAGAAAGAAGAATCAGACGATGATATGGGT
TTCAGCCTCTTTGACTAA
Protein sequenceShow/hide protein sequence
MKVVAAYLLAVLGGNTSPGVDDVKSILNSVGAEIDEERITLLLSQVKGKDVTELIASGREKLASVPSGGGAIAVSAAAGGAAGGGAAPAPAEQKKEEKVEEKEESDDDMG
FSLFD