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Chy11G195470 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy11G195470
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionPMD domain-containing protein
Genome locationchrH11:13636980..13637705
RNA-Seq ExpressionChy11G195470
SyntenyChy11G195470
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN34118.1 hypothetical protein [Cucumis melo subsp. melo]1.66e-3388.06Show/hide
Query:  MHYVHGWLAHYFGTHYPLPKEVRGPKMTNFSGQGGSIYFGEYEERELIHNGARIQWHVSLQNQNIHE
        MHYVHGWLAHYFGTHYPLP EVRGPKMTNFSG+GGSIYFGEYE RELIHNGARIQWH +LQN++ HE
Subjt:  MHYVHGWLAHYFGTHYPLPKEVRGPKMTNFSGQGGSIYFGEYEERELIHNGARIQWHVSLQNQNIHE

KAA0046555.1 hypothetical protein E6C27_scaffold114G00780 [Cucumis melo var. makuwa]1.38e-3344.32Show/hide
Query:  HGWLAHYFGTHYPLPKEVRGPKMTNFSGQGGSIYFGEYEERELIHNGARIQWHVSLQNQNIHEP*LILVIHRFCKLLILRACVPATYHPVVKIFGL*HHT
        HG LA+YF THYPLP EVRGPKMTNFSG+GGSIYFGEYE RELIHNGARIQWH +LQN++ HE                                     
Subjt:  HGWLAHYFGTHYPLPKEVRGPKMTNFSGQGGSIYFGEYEERELIHNGARIQWHVSLQNQNIHEP*LILVIHRFCKLLILRACVPATYHPVVKIFGL*HHT

Query:  VRIDLGDSLAFTRISPMI*D---AYHL*FH*IIYYIIGGCV*GVTLHLRYNCLPVR*SLVSMLHNDLRIGGPQITGPILRIIDTI
          +D  DS +F + S        A +L    IIYYI G  V GVTL+  Y C PVR SL S+L  +    G  ++G  +R+++ +
Subjt:  VRIDLGDSLAFTRISPMI*D---AYHL*FH*IIYYIIGGCV*GVTLHLRYNCLPVR*SLVSMLHNDLRIGGPQITGPILRIIDTI

KAA0047860.1 hypothetical protein E6C27_scaffold133G001260 [Cucumis melo var. makuwa]5.31e-3486.57Show/hide
Query:  MHYVHGWLAHYFGTHYPLPKEVRGPKMTNFSGQGGSIYFGEYEERELIHNGARIQWHVSLQNQNIHE
        MHYVHGWLAHYFGTHYPLP EVRGPKMTNFSG+G SIYFGEYE RELIHNGARIQWH +LQN N H+
Subjt:  MHYVHGWLAHYFGTHYPLPKEVRGPKMTNFSGQGGSIYFGEYEERELIHNGARIQWHVSLQNQNIHE

KAA0050333.1 hypothetical protein E6C27_scaffold88G00590 [Cucumis melo var. makuwa]2.95e-3489.55Show/hide
Query:  MHYVHGWLAHYFGTHYPLPKEVRGPKMTNFSGQGGSIYFGEYEERELIHNGARIQWHVSLQNQNIHE
        MHYVHGWLAHYFGTHYPLP EVRGPKMTNFSG+GGSIYFGEYE RELIHNGARIQWH +LQN+N HE
Subjt:  MHYVHGWLAHYFGTHYPLPKEVRGPKMTNFSGQGGSIYFGEYEERELIHNGARIQWHVSLQNQNIHE

KAA0057575.1 hypothetical protein E6C27_scaffold497G00470 [Cucumis melo var. makuwa]2.25e-3385.07Show/hide
Query:  MHYVHGWLAHYFGTHYPLPKEVRGPKMTNFSGQGGSIYFGEYEERELIHNGARIQWHVSLQNQNIHE
        MHYVHGWLAHYFGTHYPLP+EVRGPKMTNFSG+GGSIYFG+YE  ELIHNGARIQWH +L N+N HE
Subjt:  MHYVHGWLAHYFGTHYPLPKEVRGPKMTNFSGQGGSIYFGEYEERELIHNGARIQWHVSLQNQNIHE

TrEMBL top hitse value%identityAlignment
A0A5A7SHN8 PMD domain-containing protein5.7e-2988.06Show/hide
Query:  MHYVHGWLAHYFGTHYPLPKEVRGPKMTNFSGQGGSIYFGEYEERELIHNGARIQWHVSLQNQNIHE
        MHYVHGWLAHYFGTHYPLP EVRGPKMTNFSG+GGSIYFGEYE RELIHNGARIQWH +LQN++ HE
Subjt:  MHYVHGWLAHYFGTHYPLPKEVRGPKMTNFSGQGGSIYFGEYEERELIHNGARIQWHVSLQNQNIHE

A0A5A7TX42 Uncharacterized protein1.6e-2888.06Show/hide
Query:  MHYVHGWLAHYFGTHYPLPKEVRGPKMTNFSGQGGSIYFGEYEERELIHNGARIQWHVSLQNQNIHE
        MHYVHGWLAHYFGTHYPLP EVRGPKMTNFS +GGSIYFGEYE RELIHNGARIQWH SLQN++ HE
Subjt:  MHYVHGWLAHYFGTHYPLPKEVRGPKMTNFSGQGGSIYFGEYEERELIHNGARIQWHVSLQNQNIHE

A0A5A7U349 PMD domain-containing protein1.5e-2989.55Show/hide
Query:  MHYVHGWLAHYFGTHYPLPKEVRGPKMTNFSGQGGSIYFGEYEERELIHNGARIQWHVSLQNQNIHE
        MHYVHGWLAHYFGTHYPLP EVRGPKMTNFSG+GGSIYFGEYE RELIHNGARIQWH +LQN+N HE
Subjt:  MHYVHGWLAHYFGTHYPLPKEVRGPKMTNFSGQGGSIYFGEYEERELIHNGARIQWHVSLQNQNIHE

A0A5A7UGW6 PMD domain-containing protein7.4e-2986.57Show/hide
Query:  MHYVHGWLAHYFGTHYPLPKEVRGPKMTNFSGQGGSIYFGEYEERELIHNGARIQWHVSLQNQNIHE
        MHYVHGWLAHYFGTHYPLP+EVRGPKMTNFSG+GGSIYFGEYE RELIHNG RIQWH +L N+N HE
Subjt:  MHYVHGWLAHYFGTHYPLPKEVRGPKMTNFSGQGGSIYFGEYEERELIHNGARIQWHVSLQNQNIHE

E5GCB9 PMD domain-containing protein5.7e-2988.06Show/hide
Query:  MHYVHGWLAHYFGTHYPLPKEVRGPKMTNFSGQGGSIYFGEYEERELIHNGARIQWHVSLQNQNIHE
        MHYVHGWLAHYFGTHYPLP EVRGPKMTNFSG+GGSIYFGEYE RELIHNGARIQWH +LQN++ HE
Subjt:  MHYVHGWLAHYFGTHYPLPKEVRGPKMTNFSGQGGSIYFGEYEERELIHNGARIQWHVSLQNQNIHE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATTACGTCCATGGCTGGTTAGCTCATTATTTTGGAACTCATTACCCACTCCCGAAAGAAGTTCGAGGTCCCAAGATGACTAACTTCTCAGGCCAAGGCGGGTCTAT
TTATTTTGGAGAGTATGAGGAGCGAGAACTGATCCATAATGGTGCAAGAATCCAGTGGCACGTGAGTCTTCAAAATCAAAATATACATGAACCATGATTGATACTCGTGA
TTCATCGTTTCTGCAAACTTCTTATTTTGCGAGCATGCGTTCCTGCTACGTATCATCCCGTTGTGAAAATATTTGGATTGTAACATCATACAGTCCGTATCGATTTGGGA
GACAGTTTGGCTTTTACTAGGATATCCCCAATGATATAGGATGCATACCACCTGTGATTTCACTGAATAATATATTACATCATTGGAGGTTGTGTGTGAGGCGTAACACT
TCATCTGAGATATAATTGTCTGCCCGTTCGTTAGAGCCTTGTAAGCATGTTACACAACGATTTAAGAATTGGTGGGCCACAAATTACGGGACCTATTTTGAGGATTATAG
ACACCATTTGGTGAGAAGTGCCATTCCTCCCCCATGGCAACGAAGACTACCCAAGAACCGAAGGAGCAACCAGGGTGGTAAGCAAATTCGTTTGGTTGAAGCAATGACTC
CTACCCTTGAGAAGGACGTGGCGGAGCATAAAGATGAAAGCGACAGCAGCAAAAGTGACTGTCATT
mRNA sequenceShow/hide mRNA sequence
ATGCATTACGTCCATGGCTGGTTAGCTCATTATTTTGGAACTCATTACCCACTCCCGAAAGAAGTTCGAGGTCCCAAGATGACTAACTTCTCAGGCCAAGGCGGGTCTAT
TTATTTTGGAGAGTATGAGGAGCGAGAACTGATCCATAATGGTGCAAGAATCCAGTGGCACGTGAGTCTTCAAAATCAAAATATACATGAACCATGATTGATACTCGTGA
TTCATCGTTTCTGCAAACTTCTTATTTTGCGAGCATGCGTTCCTGCTACGTATCATCCCGTTGTGAAAATATTTGGATTGTAACATCATACAGTCCGTATCGATTTGGGA
GACAGTTTGGCTTTTACTAGGATATCCCCAATGATATAGGATGCATACCACCTGTGATTTCACTGAATAATATATTACATCATTGGAGGTTGTGTGTGAGGCGTAACACT
TCATCTGAGATATAATTGTCTGCCCGTTCGTTAGAGCCTTGTAAGCATGTTACACAACGATTTAAGAATTGGTGGGCCACAAATTACGGGACCTATTTTGAGGATTATAG
ACACCATTTGGTGAGAAGTGCCATTCCTCCCCCATGGCAACGAAGACTACCCAAGAACCGAAGGAGCAACCAGGGTGGTAAGCAAATTCGTTTGGTTGAAGCAATGACTC
CTACCCTTGAGAAGGACGTGGCGGAGCATAAAGATGAAAGCGACAGCAGCAAAAGTGACTGTCATT
Protein sequenceShow/hide protein sequence
MHYVHGWLAHYFGTHYPLPKEVRGPKMTNFSGQGGSIYFGEYEERELIHNGARIQWHVSLQNQNIHEPLILVIHRFCKLLILRACVPATYHPVVKIFGL*HHTVRIDLGD
SLAFTRISPMIDAYHL*FH*IIYYIIGGCV*GVTLHLRYNCLPVR*SLVSMLHNDLRIGGPQITGPILRIIDTIWEVPFLPHGNEDYPRTEGATRVVSKFVWLKQ*LLPL
RRTWRSIKMKATAAKVTVI