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Chy11G195510 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy11G195510
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionPlant transposase
Genome locationchrH11:13702483..13702804
RNA-Seq ExpressionChy11G195510
SyntenyChy11G195510
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051969.1 hypothetical protein E6C27_scaffold60G004490 [Cucumis melo var. makuwa]2.07e-1155.22Show/hide
Query:  MDLTQLGSDDSENEEETMMRIVNYIDNVANPSTEREIRETSRSSDPLHHNNMDCEEATTPLPSAHAN
        MDLTQ GSDD ENE E +               EREI+ETS   D LHH+N+D EEATTPLPS+H N
Subjt:  MDLTQLGSDDSENEEETMMRIVNYIDNVANPSTEREIRETSRSSDPLHHNNMDCEEATTPLPSAHAN

KAA0055646.1 hypothetical protein E6C27_scaffold181G00110 [Cucumis melo var. makuwa]3.10e-1152.24Show/hide
Query:  MDLTQLGSDDSENEEETMMRIVNYIDNVANPSTEREIRETSRSSDPLHHNNMDCEEATTPLPSAHAN
        MD+TQ G DD ENE E +               EREIRETS   DPLHH+N+DCEE  TP PS+H N
Subjt:  MDLTQLGSDDSENEEETMMRIVNYIDNVANPSTEREIRETSRSSDPLHHNNMDCEEATTPLPSAHAN

KGN44082.1 hypothetical protein Csa_016717 [Cucumis sativus]9.67e-2376.56Show/hide
Query:  MDLTQLGSDDSENEEETMMRIVNYIDNVANPSTEREIRETSRSSDPLHHNNMDCEEATTPLPSA
        MDLTQ  SDD  NEEE MMRIVN  DNVANPS EREIRETS   DPLHHNN++ EEATTPLPS+
Subjt:  MDLTQLGSDDSENEEETMMRIVNYIDNVANPSTEREIRETSRSSDPLHHNNMDCEEATTPLPSA

TYK04585.1 hypothetical protein E5676_scaffold409G002220 [Cucumis melo var. makuwa]5.90e-3364.15Show/hide
Query:  GQTVGKKSKRPHSITRTIELQRSDRTSVKTSWRFVKSFSMDLTQLGSDDSENEEETMMRIVNYIDNVANPSTEREIRETSRSSDPLHHNNMDCEEATTPL
        GQTVGKK KRP SIT T+E +RSDRT VKTSWRF KSFSMDLTQ GSDD ENE E +               EREI+ETS   D LHH+N+D EEATTPL
Subjt:  GQTVGKKSKRPHSITRTIELQRSDRTSVKTSWRFVKSFSMDLTQLGSDDSENEEETMMRIVNYIDNVANPSTEREIRETSRSSDPLHHNNMDCEEATTPL

Query:  PSAHAN
        PS+H N
Subjt:  PSAHAN

TYK17066.1 Plant transposase [Cucumis melo var. makuwa]1.35e-0649.25Show/hide
Query:  MDLTQLGSDDSENEEETMMRIVNYIDNVANPSTEREIRETSRSSDPLHHNNMDCEEATTPLPSAHAN
        MDLTQ  SDD +N+ E +               EREIRE S   DPLH +N+DCEEATTP  S+H N
Subjt:  MDLTQLGSDDSENEEETMMRIVNYIDNVANPSTEREIRETSRSSDPLHHNNMDCEEATTPLPSAHAN

TrEMBL top hitse value%identityAlignment
A0A0A0K715 Uncharacterized protein7.1e-1676.56Show/hide
Query:  MDLTQLGSDDSENEEETMMRIVNYIDNVANPSTEREIRETSRSSDPLHHNNMDCEEATTPLPSA
        MDLTQ  SDD  NEEE MMRIVN  DNVANPS EREIRETS   DPLHHNN++ EEATTPLPS+
Subjt:  MDLTQLGSDDSENEEETMMRIVNYIDNVANPSTEREIRETSRSSDPLHHNNMDCEEATTPLPSA

A0A0A0LMZ0 Uncharacterized protein6.7e-0685.29Show/hide
Query:  EREIRETSRSSDPLHHNNMDCEEATTPLPSAHAN
        EREIRETS  SDPLHHNNMD EEATTPLPS H N
Subjt:  EREIRETSRSSDPLHHNNMDCEEATTPLPSAHAN

A0A5A7UEP1 Uncharacterized protein6.0e-0755.22Show/hide
Query:  MDLTQLGSDDSENEEETMMRIVNYIDNVANPSTEREIRETSRSSDPLHHNNMDCEEATTPLPSAHAN
        MDLTQ GSDD ENE E +               EREI+ETS   D LHH+N+D EEATTPLPS+H N
Subjt:  MDLTQLGSDDSENEEETMMRIVNYIDNVANPSTEREIRETSRSSDPLHHNNMDCEEATTPLPSAHAN

A0A5A7UMZ2 Uncharacterized protein4.6e-0752.24Show/hide
Query:  MDLTQLGSDDSENEEETMMRIVNYIDNVANPSTEREIRETSRSSDPLHHNNMDCEEATTPLPSAHAN
        MD+TQ G DD ENE E +               EREIRETS   DPLHH+N+DCEE  TP PS+H N
Subjt:  MDLTQLGSDDSENEEETMMRIVNYIDNVANPSTEREIRETSRSSDPLHHNNMDCEEATTPLPSAHAN

A0A5D3BZI8 Uncharacterized protein1.9e-2464.15Show/hide
Query:  GQTVGKKSKRPHSITRTIELQRSDRTSVKTSWRFVKSFSMDLTQLGSDDSENEEETMMRIVNYIDNVANPSTEREIRETSRSSDPLHHNNMDCEEATTPL
        GQTVGKK KRP SIT T+E +RSDRT VKTSWRF KSFSMDLTQ GSDD ENE E +               EREI+ETS   D LHH+N+D EEATTPL
Subjt:  GQTVGKKSKRPHSITRTIELQRSDRTSVKTSWRFVKSFSMDLTQLGSDDSENEEETMMRIVNYIDNVANPSTEREIRETSRSSDPLHHNNMDCEEATTPL

Query:  PSAHAN
        PS+H N
Subjt:  PSAHAN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGACAAACTGTTGGAAAGAAATCAAAAAGACCTCATTCTATAACACGTACAATAGAACTGCAACGATCAGATCGAACATCGGTAAAAACATCATGGAGATTTGTAAA
GTCATTCAGTATGGATTTAACTCAACTTGGTAGCGATGATAGTGAGAACGAGGAAGAAACGATGATGAGGATTGTAAATTATATAGATAATGTTGCCAACCCTAGTACAG
AGAGAGAGATTAGGGAAACATCACGTTCTTCTGACCCACTTCACCACAATAACATGGATTGTGAGGAAGCTACTACTCCACTTCCATCTGCCCATGCCAATA
mRNA sequenceShow/hide mRNA sequence
ATGGGACAAACTGTTGGAAAGAAATCAAAAAGACCTCATTCTATAACACGTACAATAGAACTGCAACGATCAGATCGAACATCGGTAAAAACATCATGGAGATTTGTAAA
GTCATTCAGTATGGATTTAACTCAACTTGGTAGCGATGATAGTGAGAACGAGGAAGAAACGATGATGAGGATTGTAAATTATATAGATAATGTTGCCAACCCTAGTACAG
AGAGAGAGATTAGGGAAACATCACGTTCTTCTGACCCACTTCACCACAATAACATGGATTGTGAGGAAGCTACTACTCCACTTCCATCTGCCCATGCCAATA
Protein sequenceShow/hide protein sequence
MGQTVGKKSKRPHSITRTIELQRSDRTSVKTSWRFVKSFSMDLTQLGSDDSENEEETMMRIVNYIDNVANPSTEREIRETSRSSDPLHHNNMDCEEATTPLPSAHANX