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Chy11G195570 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy11G195570
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionDUF4219 domain-containing protein
Genome locationchrH11:13749080..13750410
RNA-Seq ExpressionChy11G195570
SyntenyChy11G195570
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037350.1 Integrase, catalytic core [Cucumis melo var. makuwa]1.66e-2270.83Show/hide
Query:  EGQDLWHVVGGTEVNPPQNDVALKKCNIKAGKIMSAIKTTIDEEMLEYISIMDTLKEAYDTCTSLFSKKDGS
        +GQDLW VVGGTEVNPP++   LKK NIKAGK   AIKTTIDEEMLE+ISIM+T K+ +DT TSLFSKK+ +
Subjt:  EGQDLWHVVGGTEVNPPQNDVALKKCNIKAGKIMSAIKTTIDEEMLEYISIMDTLKEAYDTCTSLFSKKDGS

KAA0037685.1 uncharacterized protein E6C27_scaffold1593G00060 [Cucumis melo var. makuwa]2.83e-2674.29Show/hide
Query:  EGQDLWHVVGGTEVNPPQNDVALKKCNIKAGKIMSAIKTTIDEEMLEYISIMDTLKEAYDTCTSLFSKKD
        +GQDLW VVGGTEVNPP++  ALKK NIKAGK+M AIKTTIDEEMLE+ISIM+T K++ DT  SLFSKK+
Subjt:  EGQDLWHVVGGTEVNPPQNDVALKKCNIKAGKIMSAIKTTIDEEMLEYISIMDTLKEAYDTCTSLFSKKD

KAA0051808.1 UBN2_3 domain-containing protein [Cucumis melo var. makuwa]7.29e-2362.5Show/hide
Query:  EGQDLWHVVGGTEVNPPQNDVALKKCNIKAGKIMSAIKTTIDEEMLEYISIMDTLKEAYDTCTSLFSKKDGS
        +GQDLW V+G TE NPP++   LKK NIKAGK++  IKTT+DEEMLE+ISI++T K+A+DT  SLFSKK+ +
Subjt:  EGQDLWHVVGGTEVNPPQNDVALKKCNIKAGKIMSAIKTTIDEEMLEYISIMDTLKEAYDTCTSLFSKKDGS

KAA0056550.1 hypothetical protein E6C27_scaffold288G00520 [Cucumis melo var. makuwa]3.76e-2270.59Show/hide
Query:  LWHVVGGTEVNPPQNDVALKKCNIKAGKIMSAIKTTIDEEMLEYISIMDTLKEAYDTCTSLFSKKDGS
        +W VVGGTEVNPP++  ALKK NIKAGK M AIKTTIDEEMLE+ISIM+  K+A+DT  SLFSKK+ +
Subjt:  LWHVVGGTEVNPPQNDVALKKCNIKAGKIMSAIKTTIDEEMLEYISIMDTLKEAYDTCTSLFSKKDGS

KAE8646930.1 hypothetical protein Csa_020956 [Cucumis sativus]1.11e-3444.27Show/hide
Query:  MWDEEGQDLWHVVGGTEVNPPQNDVALKKCNIKAGKIMSAIKTTIDEEMLEYISIMDTL-KEAYDTCTSL------------FSKKDGS*T*I*KLYCCN
        MWDE GQDLWHVVGG EV PP+N +A KKCNIKA KIM AI+TT+DEEMLEYIS+   L K+ + T                FSKK             +
Subjt:  MWDEEGQDLWHVVGGTEVNPPQNDVALKKCNIKAGKIMSAIKTTIDEEMLEYISIMDTL-KEAYDTCTSL------------FSKKDGS*T*I*KLYCCN

Query:  SRLGSPTFFD*LRKYAC*PRSIG*ENVEGHN------------KEQ**KNALYWTKKRSFKISKESRLKGDEETPKPSQVEGASKHNWQHDT
         ++   +F   +  +A  P  I  EN+  +             K    K      +K   K  K++ LKGDEETPKPSQVEGASKHN QHDT
Subjt:  SRLGSPTFFD*LRKYAC*PRSIG*ENVEGHN------------KEQ**KNALYWTKKRSFKISKESRLKGDEETPKPSQVEGASKHNWQHDT

TrEMBL top hitse value%identityAlignment
A0A5A7T1U9 Integrase, catalytic core4.8e-1972.86Show/hide
Query:  EGQDLWHVVGGTEVNPPQNDVALKKCNIKAGKIMSAIKTTIDEEMLEYISIMDTLKEAYDTCTSLFSKKD
        +GQDLW VVGGTEVNPP++   LKK NIKAGK   AIKTTIDEEMLE+ISIM+T K+ +DT TSLFSKK+
Subjt:  EGQDLWHVVGGTEVNPPQNDVALKKCNIKAGKIMSAIKTTIDEEMLEYISIMDTLKEAYDTCTSLFSKKD

A0A5A7TNQ2 UBN2_3 domain-containing protein1.3e-1668.57Show/hide
Query:  EGQDLWHVVGGTEVNPPQNDVALKKCNIKAGKIMSAIKTTIDEEMLEYISIMDTLKEAYDTCTSLFSKKD
        +GQDLW VVGGTEVNP ++  ALKK N KA K M  IKTTID+EMLE+ISIM+T K+A+DT  SLFSKK+
Subjt:  EGQDLWHVVGGTEVNPPQNDVALKKCNIKAGKIMSAIKTTIDEEMLEYISIMDTLKEAYDTCTSLFSKKD

A0A5A7UNB3 Uncharacterized protein1.0e-1672.73Show/hide
Query:  LWHVVGGTEVNPPQNDVALKKCNIKAGKIMSAIKTTIDEEMLEYISIMDTLKEAYDTCTSLFSKKD
        +W VVGGTEVNPP++  ALKK NIKAGK M AIKTTIDEEMLE+ISIM+  K+A+DT  SLFSKK+
Subjt:  LWHVVGGTEVNPPQNDVALKKCNIKAGKIMSAIKTTIDEEMLEYISIMDTLKEAYDTCTSLFSKKD

A0A5D3CHH6 DUF4219 domain-containing protein9.7e-2074.29Show/hide
Query:  EGQDLWHVVGGTEVNPPQNDVALKKCNIKAGKIMSAIKTTIDEEMLEYISIMDTLKEAYDTCTSLFSKKD
        +GQDLW VVGGTEVNPP++  ALKK NIKAGK+M AIKTTIDEEMLE+ISIM+T K++ DT  SLFSKK+
Subjt:  EGQDLWHVVGGTEVNPPQNDVALKKCNIKAGKIMSAIKTTIDEEMLEYISIMDTLKEAYDTCTSLFSKKD

A0A5D3DCY7 UBN2_3 domain-containing protein2.6e-1764.29Show/hide
Query:  EGQDLWHVVGGTEVNPPQNDVALKKCNIKAGKIMSAIKTTIDEEMLEYISIMDTLKEAYDTCTSLFSKKD
        +GQDLW V+G TE NPP++   LKK NIKAGK++  IKTT+DEEMLE+ISI++T K+A+DT  SLFSKK+
Subjt:  EGQDLWHVVGGTEVNPPQNDVALKKCNIKAGKIMSAIKTTIDEEMLEYISIMDTLKEAYDTCTSLFSKKD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGGATGAAGAAGGTCAAGACTTGTGGCATGTTGTAGGAGGTACTGAAGTTAATCCACCTCAGAATGATGTTGCTTTAAAAAAATGTAATATCAAGGCAGGTAAAAT
CATGTCTGCAATTAAAACTACAATTGATGAAGAAATGTTGGAGTACATTAGTATTATGGACACGCTAAAGGAAGCATATGACACATGCACCTCACTTTTCTCAAAGAAGG
ATGGGTCTTAAACTTGAATATAAAAGCTTTATTGTTGTAATTCAAGGTTGGGCAGTCCAACCTTCTTTGATTGACTTAGAAAATATGCTTGTTAGCCAAGAAGCATTGGC
TAAGAAAATGTCGAAGGTCACAATAAAGAGCAATAATGAAAAAACGCTCTTTATTGGACAAAGAAAAGGTCATTCAAAATTTCAAAAGAAAGCAGGCTTAAAGGAGATGA
AGAGACTCCAAAACCCTCTCAAGTTGAGGGAGCTAGTAAACATAATTGGCAACATGACACATAG
mRNA sequenceShow/hide mRNA sequence
ATGTGGGATGAAGAAGGTCAAGACTTGTGGCATGTTGTAGGAGGTACTGAAGTTAATCCACCTCAGAATGATGTTGCTTTAAAAAAATGTAATATCAAGGCAGGTAAAAT
CATGTCTGCAATTAAAACTACAATTGATGAAGAAATGTTGGAGTACATTAGTATTATGGACACGCTAAAGGAAGCATATGACACATGCACCTCACTTTTCTCAAAGAAGG
ATGGGTCTTAAACTTGAATATAAAAGCTTTATTGTTGTAATTCAAGGTTGGGCAGTCCAACCTTCTTTGATTGACTTAGAAAATATGCTTGTTAGCCAAGAAGCATTGGC
TAAGAAAATGTCGAAGGTCACAATAAAGAGCAATAATGAAAAAACGCTCTTTATTGGACAAAGAAAAGGTCATTCAAAATTTCAAAAGAAAGCAGGCTTAAAGGAGATGA
AGAGACTCCAAAACCCTCTCAAGTTGAGGGAGCTAGTAAACATAATTGGCAACATGACACATAG
Protein sequenceShow/hide protein sequence
MWDEEGQDLWHVVGGTEVNPPQNDVALKKCNIKAGKIMSAIKTTIDEEMLEYISIMDTLKEAYDTCTSLFSKKDGST*I*KLYCCNSRLGSPTFFD*LRKYAC*PRSIG*
ENVEGHNKEQ*KNALYWTKKRSFKISKESRLKGDEETPKPSQVEGASKHNWQHDT*