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Chy11G196630 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy11G196630
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
Genome locationchrH11:15614223..15615402
RNA-Seq ExpressionChy11G196630
SyntenyChy11G196630
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038287.1 DNA-directed RNA polymerase I subunit RPA1-like [Cucumis melo var. makuwa]6.92e-0586.67Show/hide
Query:  RLSYILTYQFFKKASYNNKDVVYLQEFRLA
        RLSYILTYQF KKASYN+KDVVYLQ F LA
Subjt:  RLSYILTYQFFKKASYNNKDVVYLQEFRLA
TrEMBL top hitse value%identityAlignment
A0A5A7T9I0 DNA-directed RNA polymerase I subunit RPA1-like5.6e-0486.67Show/hide
Query:  RLSYILTYQFFKKASYNNKDVVYLQEFRLA
        RLSYILTYQF KKASYN+KDVVYLQ F LA
Subjt:  RLSYILTYQFFKKASYNNKDVVYLQEFRLA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AATCTATCTCCCATACAAATAGCAAGAAGCATCAAGTAGCAAATCAATGAAAGGTCAAACAACAACACAACCACATAAATCTCCAACATCTAGACATATTGGATCATGAA
GAAACCTTTAAAGACTATCCATGGGTGGAGATTATCGTACATCCTAACATATCAATTCTTTAAGAAAGCATCATACAACAACAAGGATGTTGTATACCTTCAAGAATTTC
GCCTAGCTAGTCTATTGGGCTTTTGAGACAATACCAAGACTTTTCAATTTAGATGTTGGGTTTGAAAGAAAGCTTGGAGTCCAAGGTCCAACAATCGTGTCATGGGAATG
TTTGGGGTCAAGTGACTGGAGGACTCTAAACATGAACGGTTTTTAA
mRNA sequenceShow/hide mRNA sequence
AATCTATCTCCCATACAAATAGCAAGAAGCATCAAGTAGCAAATCAATGAAAGGTCAAACAACAACACAACCACATAAATCTCCAACATCTAGACATATTGGATCATGAA
GAAACCTTTAAAGACTATCCATGGGTGGAGATTATCGTACATCCTAACATATCAATTCTTTAAGAAAGCATCATACAACAACAAGGATGTTGTATACCTTCAAGAATTTC
GCCTAGCTAGTCTATTGGGCTTTTGAGACAATACCAAGACTTTTCAATTTAGATGTTGGGTTTGAAAGAAAGCTTGGAGTCCAAGGTCCAACAATCGTGTCATGGGAATG
TTTGGGGTCAAGTGACTGGAGGACTCTAAACATGAACGGTTTTTAA
Protein sequenceShow/hide protein sequence
NLSPIQIARSIKQINERSNNNTTT*ISNI*TYWIMKKPLKTIHGWRLSYILTYQFFKKASYNNKDVVYLQEFRLASLLGFDNTKTFQFRCWV*KKAWSPRSNNRVMGMFG
VK*LEDSKHERFLX