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Chy11G196690 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy11G196690
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
Genome locationchrH11:15711904..15714361
RNA-Seq ExpressionChy11G196690
SyntenyChy11G196690
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046655.1 uncharacterized protein E6C27_scaffold427G00180 [Cucumis melo var. makuwa]3.10e-0577.78Show/hide
Query:  MQEMFEFKLRLIRGCGVTSINHWNIPF
        MQEMFEFKL LIRGCG TS ++WNIP+
Subjt:  MQEMFEFKLRLIRGCGVTSINHWNIPF
KAA0051834.1 uncharacterized protein E6C27_scaffold60G002600 [Cucumis melo var. makuwa]1.41e-0671.05Show/hide
Query:  MQEMFEFKLRLIRGCGVTSINHWNIPFL*RLSVS*RAI
        MQEMFEFKL LIRGCG TS ++WNI  L R+SVS R I
Subjt:  MQEMFEFKLRLIRGCGVTSINHWNIPFL*RLSVS*RAI
KAA0051873.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]2.95e-0565.79Show/hide
Query:  MQEMFEFKLRLIRGCGVTSINHWNIPFL*RLSVS*RAI
        MQE FEFKL LIRGCG TS + WN P L R+ VS R I
Subjt:  MQEMFEFKLRLIRGCGVTSINHWNIPFL*RLSVS*RAI
KAA0062293.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]3.43e-0539.71Show/hide
Query:  NDGQKLDKT*E*VFD*V*RWSVPIFRACKVSRQ*LWMNKVSMQEMFEFKLRLIRGCGVTSINHWNIPF
        NDGQ+L K     F              K         KVSM+EM+E KL L RGCG+ S ++WNIP+
Subjt:  NDGQKLDKT*E*VFD*V*RWSVPIFRACKVSRQ*LWMNKVSMQEMFEFKLRLIRGCGVTSINHWNIPF
KAA0067094.1 uncharacterized protein E6C27_scaffold38G001500 [Cucumis melo var. makuwa]1.47e-0474.07Show/hide
Query:  MQEMFEFKLRLIRGCGVTSINHWNIPF
        MQEMFEFKL LIRGCG TS ++WN P+
Subjt:  MQEMFEFKLRLIRGCGVTSINHWNIPF
TrEMBL top hitse value%identityAlignment
A0A5D3DCW2 CACTA en-spm transposon protein7.8e-0465.79Show/hide
Query:  MQEMFEFKLRLIRGCGVTSINHWNIPFL*RLSVS*RAI
        MQE FEFKL LIRGCG TS + WN P L R+ VS R I
Subjt:  MQEMFEFKLRLIRGCGVTSINHWNIPFL*RLSVS*RAI
A0A5D3DCW3 Uncharacterized protein5.4e-0571.05Show/hide
Query:  MQEMFEFKLRLIRGCGVTSINHWNIPFL*RLSVS*RAI
        MQEMFEFKL LIRGCG TS ++WNI  L R+SVS R I
Subjt:  MQEMFEFKLRLIRGCGVTSINHWNIPFL*RLSVS*RAI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTTATGTCTATCCTGCAGTTATGGGTTTTTAACGATGGACAAAAGTTAGATAAAACTTAAGAATAAGTTTTCGATTGAGTATAGAGATGGAGCGTCCCAATTTTTAGAGC
TTGCAAAGTATCACGCCAATAATTATGGATGAATAAGGTATCCATGCAAGAGATGTTTGAATTCAAATTGAGACTCATTAGAGGGTGTGGAGTGACATCTATTAACCATT
GGAATATCCCCTTCCTATAAAGACTGAGTGTATCATGAAGAGCTATAGTAGTAACCCTTTTGACGAAGGAACTAGTAGTAACCCTTTTCCTAAAGAAAATAAAACGTTGG
GTATGCTTCATGATCTACAAGCTTCAATTGAACACATAGAAGAAATGGAGGAAGGTTGGATCATGAAATGTTGTTTAATAGTGGAGTAGATATAGAACAAGAGACAACAA
ACAAATTTTAGGACTTATTGAATGAAGCACGTAGTGAGCTATACCCCGTTCTGAATTTTCCTCCTTGAATTTTTTGGTTAAGATGA
mRNA sequenceShow/hide mRNA sequence
TTTATGTCTATCCTGCAGTTATGGGTTTTTAACGATGGACAAAAGTTAGATAAAACTTAAGAATAAGTTTTCGATTGAGTATAGAGATGGAGCGTCCCAATTTTTAGAGC
TTGCAAAGTATCACGCCAATAATTATGGATGAATAAGGTATCCATGCAAGAGATGTTTGAATTCAAATTGAGACTCATTAGAGGGTGTGGAGTGACATCTATTAACCATT
GGAATATCCCCTTCCTATAAAGACTGAGTGTATCATGAAGAGCTATAGTAGTAACCCTTTTGACGAAGGAACTAGTAGTAACCCTTTTCCTAAAGAAAATAAAACGTTGG
GTATGCTTCATGATCTACAAGCTTCAATTGAACACATAGAAGAAATGGAGGAAGGTTGGATCATGAAATGTTGTTTAATAGTGGAGTAGATATAGAACAAGAGACAACAA
ACAAATTTTAGGACTTATTGAATGAAGCACGTAGTGAGCTATACCCCGTTCTGAATTTTCCTCCTTGAATTTTTTGGTTAAGATGA
Protein sequenceShow/hide protein sequence
FMSILQLWVFNDGQKLDKTE*VFD*V*RWSVPIFRACKVSRQ*LWMNKVSMQEMFEFKLRLIRGCGVTSINHWNIPFLRLSVS*RAIVVTLLTKELVVTLFLKKIKRWVC
FMIYKLQLNTKKWRKVGS*NVV**WSRYRTRDNKQILGLIE*ST**AIPRSEFSSLNFLVKMX