CuGenDBv2

Gene ID	Chy11G199040
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Elongation factor 1-alpha
Genome location	chrH11:19447386..19447733
RNA-Seq Expression	Chy11G199040
Synteny	Chy11G199040
Gene Ontology terms	GO:0006414 - translational elongation (biological process) GO:0043229 - intracellular organelle (cellular component) GO:0003746 - translation elongation factor activity (molecular function) GO:0003924 - GTPase activity (molecular function) GO:0004781 - sulfate adenylyltransferase (ATP) activity (molecular function) GO:0005525 - GTP binding (molecular function)
InterPro domains	IPR004160 - Translation elongation factor EFTu/EF1A, C-terminal IPR009001 - Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG5237701.1 elongation factor [Salix suchowensis]

2.23e-73

95.65

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Query:  MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIPTKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDP
        MNHPGQIGNGYAPVLDCHT HIAVKFAEILTKIDRRSGKELEKEPKFLKNGD+GMIKMIPTKPMVVETFS+YPPLGRFAVRDMRQTVAVGVIK+VEKKDP
Subjt:  MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIPTKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDP

Query:  SGAKVTKSAAKKGGK
        +GAKVTKSAAKKGGK
Subjt:  SGAKVTKSAAKKGGK

KJB73628.1 hypothetical protein B456_011G2414001, partial [Gossypium raimondii]

2.27e-74

97.39

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Query:  MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIPTKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDP
        MNHPGQIGNGYAPVLDCHTSHIAVKFAE+LTKIDRRSGKELEKEPKFLKNGDAGMIKM+PTKPMVVETFS YPPLGRFAVRDMRQTVAVGVIKSVEKKDP
Subjt:  MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIPTKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDP

Query:  SGAKVTKSAAKKGGK
        SGAKVTKSAAKKGGK
Subjt:  SGAKVTKSAAKKGGK

MBA0870758.1 hypothetical protein [Gossypium schwendimanii]

7.75e-74

97.39

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Query:  MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIPTKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDP
        MNHPGQIGNGYAPVLDCHTSHIAVKFAE+LTKIDRRSGKELEKEPKFLKNGDAGMIKM+PTKPMVVETFS YPPLGRFAVRDMRQTVAVGVIKSVEKKDP
Subjt:  MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIPTKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDP

Query:  SGAKVTKSAAKKGGK
        SGAKVTKSAAKKGGK
Subjt:  SGAKVTKSAAKKGGK

XP_022756686.1 elongation factor 1-alpha [Durio zibethinus]

2.71e-74

96.52

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Query:  MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIPTKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDP
        MNHPGQIGNGYAPVLDCHTSHIAVKFAE+LTKIDRRSGKELEKEPKFLKNGDAG +KMIPTKPMVVETFS+YPPLGRFAVRDMRQTVAVGVIKSVEKKDP
Subjt:  MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIPTKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDP

Query:  SGAKVTKSAAKKGGK
        SGAKVTKSAAKKGGK
Subjt:  SGAKVTKSAAKKGGK

XP_031744096.1 elongation factor 1-alpha isoform X2 [Cucumis sativus]

7.06e-74

100

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Query:  MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIPTKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDP
        MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIPTKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDP
Subjt:  MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIPTKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDP

Query:  SGAKVTKSAAKKGGK
        SGAKVTKSAAKKGGK
Subjt:  SGAKVTKSAAKKGGK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KCN9 Uncharacterized protein

1.4e-57

100

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Query:  MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIPTKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDP
        MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIPTKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDP
Subjt:  MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIPTKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDP

Query:  SGAKVTKSAAKKGGK
        SGAKVTKSAAKKGGK
Subjt:  SGAKVTKSAAKKGGK

A0A218XTJ1 Elongation factor 1-alpha

6.8e-57

99.13

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Query:  MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIPTKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDP
        MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIPTKPMVVETFS YPPLGRFAVRDMRQTVAVGVIKSVEKKDP
Subjt:  MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIPTKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDP

Query:  SGAKVTKSAAKKGGK
        SGAKVTKSAAKKGGK
Subjt:  SGAKVTKSAAKKGGK

A0A2P5Y7F4 Elongation factor 1-alpha

6.8e-57

97.39

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Query:  MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIPTKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDP
        MNHPGQIGNGYAPVLDCHTSHIAVKFAE+LTKIDRRSGKELEKEPKFLKNGDAGMIKM+PTKPMVVETFS+YPPLGRFAVRDMRQTVAVGVIKSVEKKDP
Subjt:  MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIPTKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDP

Query:  SGAKVTKSAAKKGGK
        SGAKVTKSAAKKGGK
Subjt:  SGAKVTKSAAKKGGK

A0A6J1FXI6 Elongation factor 1-alpha

5.2e-57

98.26

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Query:  MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIPTKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDP
        MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKM+PTKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDP
Subjt:  MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIPTKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDP

Query:  SGAKVTKSAAKKGGK
        SGAKVTKSA KKGGK
Subjt:  SGAKVTKSAAKKGGK

A0A6J1J949 Elongation factor 1-alpha

5.2e-57

98.26

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Query:  MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIPTKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDP
        MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKM+PTKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDP
Subjt:  MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIPTKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDP

Query:  SGAKVTKSAAKKGGK
        SGAKVTKSA KKGGK
Subjt:  SGAKVTKSAAKKGGK

SwissProt top hits

e value

%identity

Alignment

O49169 Elongation factor 1-alpha

9.2e-59

97.39

Show/hide

Query:  MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIPTKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDP
        MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAG +KMIPTKPMVVETFS YPPLGRFAVRDMRQTVAVGVIKSVEKKDP
Subjt:  MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIPTKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDP

Query:  SGAKVTKSAAKKGGK
        SGAKVTKSAAKKGGK
Subjt:  SGAKVTKSAAKKGGK

P0DH99 Elongation factor 1-alpha 1

2.5e-56

91.3

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Query:  MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIPTKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDP
        MNHPGQIGNGYAPVLDCHTSHIAVKF+EILTKIDRRSGKE+EKEPKFLKNGDAGM+KM PTKPMVVETFS+YPPLGRFAVRDMRQTVAVGVIKSV+KKDP
Subjt:  MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIPTKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDP

Query:  SGAKVTKSAAKKGGK
        +GAKVTK+A KKG K
Subjt:  SGAKVTKSAAKKGGK

Q0WL56 Elongation factor 1-alpha 3

2.5e-56

91.3

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Query:  MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIPTKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDP
        MNHPGQIGNGYAPVLDCHTSHIAVKF+EILTKIDRRSGKE+EKEPKFLKNGDAGM+KM PTKPMVVETFS+YPPLGRFAVRDMRQTVAVGVIKSV+KKDP
Subjt:  MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIPTKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDP

Query:  SGAKVTKSAAKKGGK
        +GAKVTK+A KKG K
Subjt:  SGAKVTKSAAKKGGK

Q41803 Elongation factor 1-alpha

6.6e-57

94.64

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Query:  MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIPTKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDP
        MNHPGQIGNGYAPVLDCHTSHIAVKFAE++TKIDRRSGKELEKEPKFLKNGDAGM+KM+PTKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDP
Subjt:  MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIPTKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDP

Query:  SGAKVTKSAAKK
        +GAKVTK+AAKK
Subjt:  SGAKVTKSAAKK

Q8W4H7 Elongation factor 1-alpha 2

2.5e-56

91.3

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Query:  MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIPTKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDP
        MNHPGQIGNGYAPVLDCHTSHIAVKF+EILTKIDRRSGKE+EKEPKFLKNGDAGM+KM PTKPMVVETFS+YPPLGRFAVRDMRQTVAVGVIKSV+KKDP
Subjt:  MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIPTKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDP

Query:  SGAKVTKSAAKKGGK
        +GAKVTK+A KKG K
Subjt:  SGAKVTKSAAKKGGK

Arabidopsis top hits

e value

%identity

Alignment

AT1G07920.1 GTP binding Elongation factor Tu family protein

1.8e-57

91.3

Show/hide

Query:  MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIPTKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDP
        MNHPGQIGNGYAPVLDCHTSHIAVKF+EILTKIDRRSGKE+EKEPKFLKNGDAGM+KM PTKPMVVETFS+YPPLGRFAVRDMRQTVAVGVIKSV+KKDP
Subjt:  MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIPTKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDP

Query:  SGAKVTKSAAKKGGK
        +GAKVTK+A KKG K
Subjt:  SGAKVTKSAAKKGGK

AT1G07930.1 GTP binding Elongation factor Tu family protein

1.8e-57

91.3

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Query:  MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIPTKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDP
        MNHPGQIGNGYAPVLDCHTSHIAVKF+EILTKIDRRSGKE+EKEPKFLKNGDAGM+KM PTKPMVVETFS+YPPLGRFAVRDMRQTVAVGVIKSV+KKDP
Subjt:  MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIPTKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDP

Query:  SGAKVTKSAAKKGGK
        +GAKVTK+A KKG K
Subjt:  SGAKVTKSAAKKGGK

AT1G07930.2 GTP binding Elongation factor Tu family protein

1.8e-57

91.3

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Query:  MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIPTKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDP
        MNHPGQIGNGYAPVLDCHTSHIAVKF+EILTKIDRRSGKE+EKEPKFLKNGDAGM+KM PTKPMVVETFS+YPPLGRFAVRDMRQTVAVGVIKSV+KKDP
Subjt:  MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIPTKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDP

Query:  SGAKVTKSAAKKGGK
        +GAKVTK+A KKG K
Subjt:  SGAKVTKSAAKKGGK

AT1G07940.1 GTP binding Elongation factor Tu family protein

1.8e-57

91.3

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Query:  MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIPTKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDP
        MNHPGQIGNGYAPVLDCHTSHIAVKF+EILTKIDRRSGKE+EKEPKFLKNGDAGM+KM PTKPMVVETFS+YPPLGRFAVRDMRQTVAVGVIKSV+KKDP
Subjt:  MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIPTKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDP

Query:  SGAKVTKSAAKKGGK
        +GAKVTK+A KKG K
Subjt:  SGAKVTKSAAKKGGK

AT1G07940.2 GTP binding Elongation factor Tu family protein

1.8e-57

91.3

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Query:  MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIPTKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDP
        MNHPGQIGNGYAPVLDCHTSHIAVKF+EILTKIDRRSGKE+EKEPKFLKNGDAGM+KM PTKPMVVETFS+YPPLGRFAVRDMRQTVAVGVIKSV+KKDP
Subjt:  MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIPTKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDP

Query:  SGAKVTKSAAKKGGK
        +GAKVTK+A KKG K
Subjt:  SGAKVTKSAAKKGGK

Sequences

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CDS sequence

Show/hide CDS sequence

ATGAACCACCCTGGACAAATTGGCAATGGTTATGCTCCAGTGCTTGATTGCCACACATCTCATATTGCGGTGAAATTTGCCGAGATTCTAACCAAAATCGACAGGCGATC
CGGTAAGGAACTTGAGAAGGAACCCAAGTTCTTAAAGAATGGTGATGCAGGTATGATTAAGATGATTCCCACCAAACCTATGGTGGTGGAAACCTTCTCTCAGTACCCTC
CTCTTGGACGTTTCGCCGTAAGAGACATGAGACAGACAGTTGCTGTTGGTGTCATCAAGTCCGTCGAAAAGAAGGATCCAAGTGGGGCTAAGGTTACTAAATCCGCAGCC
AAGAAGGGTGGAAAGTGA

mRNA sequence

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Protein sequence

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MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIPTKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDPSGAKVTKSAA
KKGGK

Chy11G199040 (gene) of Cucumber (hystrix) v1 genome