CuGenDBv2

Gene ID	Chy11G199210
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Thylakoid soluble phosphoprotein TSP
Genome location	chrH11:19666173..19666466
RNA-Seq Expression	Chy11G199210
Synteny	Chy11G199210
Gene Ontology terms	NA
InterPro domains	IPR021584 - Thylakoid soluble phosphoprotein TSP9 IPR037244 - Thylakoid soluble phosphoprotein TSP9 superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7010512.1 hypothetical protein SDJN02_27306, partial [Cucurbita argyrosperma subsp. argyrosperma]

4.22e-46

86.6

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Query:  MASLPIAFSPAAGSVFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKDAASGNGTGSVRGGRKNSVQVPPKKNGGGFGGLFAKKD
        MASLPIAFSPAAG VFAATAAKGAGESKKEKGLLDWIIGSL +DQLLETDPVLQKVEGKD+ SG    +V GGRKNSVQVPPKKN GGFGGLFAK+D
Subjt:  MASLPIAFSPAAGSVFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKDAASGNGTGSVRGGRKNSVQVPPKKNGGGFGGLFAKKD

XP_004143212.1 uncharacterized protein LOC101205268 [Cucumis sativus]

1.53e-58

98.97

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Query:  MASLPIAFSPAAGSVFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKDAASGNGTGSVRGGRKNSVQVPPKKNGGGFGGLFAKKD
        MASLPIAFSPAAG VFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKDAASGNGTGSVRGGRKNSVQVPPKKNGGGFGGLFAKKD
Subjt:  MASLPIAFSPAAGSVFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKDAASGNGTGSVRGGRKNSVQVPPKKNGGGFGGLFAKKD

XP_008464052.1 PREDICTED: uncharacterized protein LOC103502033 [Cucumis melo]

6.53e-53

92.78

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Query:  MASLPIAFSPAAGSVFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKDAASGNGTGSVRGGRKNSVQVPPKKNGGGFGGLFAKKD
        MASLPIAFSPAAG VFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKD  SGNGTG+VRG RKNSVQ+PPKKNGG FGGLFAKKD
Subjt:  MASLPIAFSPAAGSVFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKDAASGNGTGSVRGGRKNSVQVPPKKNGGGFGGLFAKKD

XP_023532336.1 uncharacterized protein LOC111794525 [Cucurbita pepo subsp. pepo]

1.27e-43

81.44

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Query:  MASLPIAFSPAAGSVFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKDAASGNGTGSVRGGRKNSVQVPPKKNGGGFGGLFAKKD
        MASL  AFSPAAG VFAATAAKGAGESKKEKG+LDWI+G + KDQLLETDPVLQKVEGK+  + NG G+VRGG+KNSVQVPPKKN G FGGLFAKKD
Subjt:  MASLPIAFSPAAGSVFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKDAASGNGTGSVRGGRKNSVQVPPKKNGGGFGGLFAKKD

XP_038901860.1 uncharacterized protein LOC120088545 [Benincasa hispida]

2.66e-52

92.78

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Query:  MASLPIAFSPAAGSVFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKDAASGNGTGSVRGGRKNSVQVPPKKNGGGFGGLFAKKD
        MASLPIAFSPAA  VFAATAAKGAGESKKE+GLLDWIIGSLNKDQLLETDPVLQKVEGK AA+GNG+G+VRGGRKNSVQVPPKKNGGGFGGLFAKKD
Subjt:  MASLPIAFSPAAGSVFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKDAASGNGTGSVRGGRKNSVQVPPKKNGGGFGGLFAKKD

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KC59 Uncharacterized protein

9.6e-44

98.97

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Query:  MASLPIAFSPAAGSVFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKDAASGNGTGSVRGGRKNSVQVPPKKNGGGFGGLFAKKD
        MASLPIAFSPAAG VFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKDAASGNGTGSVRGGRKNSVQVPPKKNGGGFGGLFAKKD
Subjt:  MASLPIAFSPAAGSVFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKDAASGNGTGSVRGGRKNSVQVPPKKNGGGFGGLFAKKD

A0A1S3CKK5 uncharacterized protein LOC103502033

2.4e-39

92.78

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Query:  MASLPIAFSPAAGSVFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKDAASGNGTGSVRGGRKNSVQVPPKKNGGGFGGLFAKKD
        MASLPIAFSPAAG VFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKD  SGNGTG+VR GRKNSVQ+PPKKNGG FGGLFAKKD
Subjt:  MASLPIAFSPAAGSVFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKDAASGNGTGSVRGGRKNSVQVPPKKNGGGFGGLFAKKD

A0A5A7V5S9 Uncharacterized protein

2.4e-39

92.78

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Query:  MASLPIAFSPAAGSVFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKDAASGNGTGSVRGGRKNSVQVPPKKNGGGFGGLFAKKD
        MASLPIAFSPAAG VFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKD  SGNGTG+VR GRKNSVQ+PPKKNGG FGGLFAKKD
Subjt:  MASLPIAFSPAAGSVFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKDAASGNGTGSVRGGRKNSVQVPPKKNGGGFGGLFAKKD

A0A6J1G777 uncharacterized protein LOC111451452

8.4e-32

80.41

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Query:  MASLPIAFSPAAGSVFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKDAASGNGTGSVRGGRKNSVQVPPKKNGGGFGGLFAKKD
        MASL  AFSPAAG VFAATAAKGAGE KKEKG+LDWI+G + KDQLLETDPVLQKVEGK+  + NG G+VRGG+KNSVQVPPKKN G FGGLFAKKD
Subjt:  MASLPIAFSPAAGSVFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKDAASGNGTGSVRGGRKNSVQVPPKKNGGGFGGLFAKKD

A0A6J1L2X7 uncharacterized protein LOC111499927

8.4e-32

80.41

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Query:  MASLPIAFSPAAGSVFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKDAASGNGTGSVRGGRKNSVQVPPKKNGGGFGGLFAKKD
        MASL  AFSPAAG VFAATAAKGAGE KKEKG+LDWI+G + KDQLLETDPVLQKVEGK+  + NG G+VRGG+KNSVQVPPKKN G FGGLFAKKD
Subjt:  MASLPIAFSPAAGSVFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKDAASGNGTGSVRGGRKNSVQVPPKKNGGGFGGLFAKKD

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G47070.1 LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thylakoid soluble phosphoprotein TSP9 (InterPro:IPR021584); Has 37 Blast hits to 37 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

1.7e-13

41.94

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Query:  MASLPIAFSPAAGSVFAATAAKGAGESKKEKGLLDWIIGSLNK-DQLLETDPVLQKVEGKDAASGNGTGSVRGGRKNSVQVPPKKNGGGFGGL
        ++SL ++F+PA   V+A +   G+G  K+EK  +D+++G + K DQ  ET+P+L+KV+ K+  +  G G+VRGG+ ++    PKK+ GGFGGL
Subjt:  MASLPIAFSPAAGSVFAATAAKGAGESKKEKGLLDWIIGSLNK-DQLLETDPVLQKVEGKDAASGNGTGSVRGGRKNSVQVPPKKNGGGFGGL

Sequences

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CDS sequence

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ATGGCCTCTCTTCCAATCGCATTCTCTCCGGCCGCCGGAAGCGTATTCGCAGCCACCGCGGCCAAAGGCGCCGGCGAAAGCAAGAAAGAAAAGGGCCTTCTTGATTGGAT
CATCGGCAGCTTGAATAAGGATCAGCTTCTTGAAACCGACCCTGTTCTTCAAAAAGTCGAAGGCAAGGACGCCGCCTCCGGTAACGGCACCGGCTCCGTCCGCGGTGGCC
GAAAGAATTCCGTCCAAGTCCCCCCGAAGAAGAACGGCGGCGGGTTTGGTGGTCTCTTTGCCAAGAAAGACTGA

mRNA sequence

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Protein sequence

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MASLPIAFSPAAGSVFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKDAASGNGTGSVRGGRKNSVQVPPKKNGGGFGGLFAKKD

Chy11G199210 (gene) of Cucumber (hystrix) v1 genome